Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226625
Identifier: 21226625
GI number: 21226625
Start: 651555
End: 651902
Strand: Reverse
Name: 21226625
Synonym: MM_0523
Alternate gene names: NA
Gene position: 651902-651555 (Counterclockwise)
Preceding gene: 21226626
Following gene: 21226622
Centisome position: 15.91
GC content: 39.37
Gene sequence:
>348_bases TTGTGTAATTTAAAGCGAGAAGATGGGAGTGAAAAGATAGACGAGCCTGCTTTTTACTGCTGTGCCCAGAATTTTATTGA TCGAATCGGGTGCATGTCAGAAATTGAATGTTCCGCCACAAAAGATGAAAATTATGAGAAAAAGAGAAACCTGAAAGCAA AGCCCGTGATTGCAAACTATTTCCCCGGAACCAGCCCATTGCCTCTATTTTTTATTGAACGGAACAATTTGAATAAAGAA GAGTTCAGCCTTTTAAAGAGGCACTGGAAAATGTTCAGGAAAAATTTTCCTGTGGCAGGAATACTCTATTCAAATGGCAG GCCGTTTATTTGGCATGAAAGTCCATGA
Upstream 100 bases:
>100_bases AATTCAAATAGACAGACGCCTCACTGAGGCTATAAATAGAAATTTCGAGGTCAGAGTCGGTTTCGTTGAGACTCAGCAGA CTGCATAAAATTCGTTATTT
Downstream 100 bases:
>100_bases TGAGAAAACTCATCACGTACTCTCTCCTTCCTTTTTTCCCATAATTGCGATAATTCCACTAATTATTGTTATCCTTTCAT CAACCGAGAATATCTCTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 115; Mature: 115
Protein sequence:
>115_residues MCNLKREDGSEKIDEPAFYCCAQNFIDRIGCMSEIECSATKDENYEKKRNLKAKPVIANYFPGTSPLPLFFIERNNLNKE EFSLLKRHWKMFRKNFPVAGILYSNGRPFIWHESP
Sequences:
>Translated_115_residues MCNLKREDGSEKIDEPAFYCCAQNFIDRIGCMSEIECSATKDENYEKKRNLKAKPVIANYFPGTSPLPLFFIERNNLNKE EFSLLKRHWKMFRKNFPVAGILYSNGRPFIWHESP >Mature_115_residues MCNLKREDGSEKIDEPAFYCCAQNFIDRIGCMSEIECSATKDENYEKKRNLKAKPVIANYFPGTSPLPLFFIERNNLNKE EFSLLKRHWKMFRKNFPVAGILYSNGRPFIWHESP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13514; Mature: 13514
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.3 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNLKREDGSEKIDEPAFYCCAQNFIDRIGCMSEIECSATKDENYEKKRNLKAKPVIANY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEC FPGTSPLPLFFIERNNLNKEEFSLLKRHWKMFRKNFPVAGILYSNGRPFIWHESP CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCC >Mature Secondary Structure MCNLKREDGSEKIDEPAFYCCAQNFIDRIGCMSEIECSATKDENYEKKRNLKAKPVIANY CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCCEEEEC FPGTSPLPLFFIERNNLNKEEFSLLKRHWKMFRKNFPVAGILYSNGRPFIWHESP CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA