Definition | Methanosarcina mazei Go1 chromosome, complete genome. |
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Accession | NC_003901 |
Length | 4,096,345 |
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The map label for this gene is 21226627
Identifier: 21226627
GI number: 21226627
Start: 653365
End: 653844
Strand: Reverse
Name: 21226627
Synonym: MM_0525
Alternate gene names: NA
Gene position: 653844-653365 (Counterclockwise)
Preceding gene: 21226628
Following gene: 21226626
Centisome position: 15.96
GC content: 44.79
Gene sequence:
>480_bases ATGCCGGTGGTTGAATTTGGAGAACTTGTGAGGGGAGACAGGGTAAGAGCCAACACTCCCCGCGAAATTAATGAAGCTAT CGATGCTGAAATTGCAGCAACTGTCCGTTTTTATTCGGACAGGACCGCCTACGAGATTTCTGAAAGAATTGAAGAACTTG ATCATGAATGGGATATTGAACGATATATTGAAGCCAATGCAGCTATGCTTTCTTTTACTGGAGCGGTGCTTGGCTTAAAA GAGAGCAGAAAATGGTTAATCCTGCCTGTTGTGGTTTCAACTTTCCTGCTTCAACATGCCATACAGGGCTGGTGTCCTCC TGTATCTTTATTCAGACGGCTTTTTATCCGGACCAGAAAAGAAATAGAAGCTGAAAAATACGCCCTGAAAGCCCTTAGAG GAGACTTTGATGTCGTTTCCTTCCAGGAAAGTGGAAGGGACAGTGCAAAAGAAGCCGTCAGCAGCAGTGGAGGCATTTAA
Upstream 100 bases:
>100_bases TGAAATTGATGATGTTTAAGGGGCAGAAACTTTAAAGATAAATTTTTGATTTTTATTAATTTTTAAATTTATCTGGAACG TATTTTTTGCCAGGGGGAAT
Downstream 100 bases:
>100_bases GATTCCGGTTAAATTACCGGTCATTTATTTTTAGCGTTTATTGTTTCCGATTTTATAATGGCTCCCGGGTGTTTTTTCCG GAACAATTCTTACTCTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPVVEFGELVRGDRVRANTPREINEAIDAEIAATVRFYSDRTAYEISERIEELDHEWDIERYIEANAAMLSFTGAVLGLK ESRKWLILPVVVSTFLLQHAIQGWCPPVSLFRRLFIRTRKEIEAEKYALKALRGDFDVVSFQESGRDSAKEAVSSSGGI
Sequences:
>Translated_159_residues MPVVEFGELVRGDRVRANTPREINEAIDAEIAATVRFYSDRTAYEISERIEELDHEWDIERYIEANAAMLSFTGAVLGLK ESRKWLILPVVVSTFLLQHAIQGWCPPVSLFRRLFIRTRKEIEAEKYALKALRGDFDVVSFQESGRDSAKEAVSSSGGI >Mature_158_residues PVVEFGELVRGDRVRANTPREINEAIDAEIAATVRFYSDRTAYEISERIEELDHEWDIERYIEANAAMLSFTGAVLGLKE SRKWLILPVVVSTFLLQHAIQGWCPPVSLFRRLFIRTRKEIEAEKYALKALRGDFDVVSFQESGRDSAKEAVSSSGGI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18036; Mature: 17904
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVVEFGELVRGDRVRANTPREINEAIDAEIAATVRFYSDRTAYEISERIEELDHEWDIE CCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHH RYIEANAAMLSFTGAVLGLKESRKWLILPVVVSTFLLQHAIQGWCPPVSLFRRLFIRTRK HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH EIEAEKYALKALRGDFDVVSFQESGRDSAKEAVSSSGGI HHHHHHHHHHHHHCCCCEEECHHCCCHHHHHHHHCCCCC >Mature Secondary Structure PVVEFGELVRGDRVRANTPREINEAIDAEIAATVRFYSDRTAYEISERIEELDHEWDIE CCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHH RYIEANAAMLSFTGAVLGLKESRKWLILPVVVSTFLLQHAIQGWCPPVSLFRRLFIRTRK HHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH EIEAEKYALKALRGDFDVVSFQESGRDSAKEAVSSSGGI HHHHHHHHHHHHHCCCCEEECHHCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA