Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is cat3 [H]

Identifier: 209695520

GI number: 209695520

Start: 2225514

End: 2226170

Strand: Direct

Name: cat3 [H]

Synonym: VSAL_I2074

Alternate gene names: 209695520

Gene position: 2225514-2226170 (Clockwise)

Preceding gene: 209695517

Following gene: 209695521

Centisome position: 66.93

GC content: 42.16

Gene sequence:

>657_bases
ATGGCGTATAACGTGCTAGATGTCAACCAGTGGGCGCGAGCTCAGCACTTGAGATTTTATCAAGGCTTTAGTCACCCTTG
GTATAATATCTGTTCCAATATCGACGTAACCGCGCTGTACCAATATTGTAAGCAGCACAATCATCGTTTCTTCCACGCTT
ATCTTTATCTAACTCAGCAAGCGCTAAATCAATGTGAACCGATGAGCTATCGCCTTGTTGGGGAAGAAGTCCGCATTTAC
TCACCTATGTGTATCAGTGTCGCACTGCTTGCCGATGATAATACGGTGCGTTTTTGTGATTTAGACCATGAGCCTACATT
TTCTAACTTTACACTAAGTGCATCCAAAGCCGAGACACTGATTAAGAACACACCTTTTATCGTAGAGCAGTTCATTGGCC
AAGAAATGAAGCAGAACACGATTCATTTAACCGTATTACCATGGGTAGATTTCACTAGTATGACTCATGCTAGAGACGTT
AACTTTCCAGATAGCGTGCCGAAAATGGCATTTGGAAAACTGGTTCAACAAAATGAACAATGGCGTATGCCGCTATCCAT
TGAAGTACATCATGGCTTAATGGATGGTTTACACGTGGGGCAATTTATACAGATATTACAAGCGATGTTTGATGACCCAT
CACAGCTTGAACAATAG

Upstream 100 bases:

>100_bases
TATTAGTAAGAACGACAAGATTCAAATGTATCTTGAAGTCGCTTAAATATATAAATAGAATCAAACCGTTCAAAATGATT
GGACTTTATAGGGAATTCAA

Downstream 100 bases:

>100_bases
AAATAGGCTTCATATTTATACTGAGACGAGCAATATTACGCTCGTCAACATGCCCTATAAAGGATATCTAACTCATTATC
TCCAATTCTACTTACCCGTT

Product: chloramphenicol acetyltransferase

Products: NA

Alternate protein names: Chloramphenicol acetyltransferase III; CAT-III [H]

Number of amino acids: Translated: 218; Mature: 217

Protein sequence:

>218_residues
MAYNVLDVNQWARAQHLRFYQGFSHPWYNICSNIDVTALYQYCKQHNHRFFHAYLYLTQQALNQCEPMSYRLVGEEVRIY
SPMCISVALLADDNTVRFCDLDHEPTFSNFTLSASKAETLIKNTPFIVEQFIGQEMKQNTIHLTVLPWVDFTSMTHARDV
NFPDSVPKMAFGKLVQQNEQWRMPLSIEVHHGLMDGLHVGQFIQILQAMFDDPSQLEQ

Sequences:

>Translated_218_residues
MAYNVLDVNQWARAQHLRFYQGFSHPWYNICSNIDVTALYQYCKQHNHRFFHAYLYLTQQALNQCEPMSYRLVGEEVRIY
SPMCISVALLADDNTVRFCDLDHEPTFSNFTLSASKAETLIKNTPFIVEQFIGQEMKQNTIHLTVLPWVDFTSMTHARDV
NFPDSVPKMAFGKLVQQNEQWRMPLSIEVHHGLMDGLHVGQFIQILQAMFDDPSQLEQ
>Mature_217_residues
AYNVLDVNQWARAQHLRFYQGFSHPWYNICSNIDVTALYQYCKQHNHRFFHAYLYLTQQALNQCEPMSYRLVGEEVRIYS
PMCISVALLADDNTVRFCDLDHEPTFSNFTLSASKAETLIKNTPFIVEQFIGQEMKQNTIHLTVLPWVDFTSMTHARDVN
FPDSVPKMAFGKLVQQNEQWRMPLSIEVHHGLMDGLHVGQFIQILQAMFDDPSQLEQ

Specific function: This enzyme is an effector of chloramphenicol resistance in bacteria [H]

COG id: COG4845

COG function: function code V; Chloramphenicol O-acetyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chloramphenicol acetyltransferase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023213
- InterPro:   IPR018372
- InterPro:   IPR001707
- ProDom:   PD002660 [H]

Pfam domain/function: PF00302 CAT [H]

EC number: =2.3.1.28 [H]

Molecular weight: Translated: 25438; Mature: 25307

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYNVLDVNQWARAQHLRFYQGFSHPWYNICSNIDVTALYQYCKQHNHRFFHAYLYLTQQ
CCCEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHH
ALNQCEPMSYRLVGEEVRIYSPMCISVALLADDNTVRFCDLDHEPTFSNFTLSASKAETL
HHHHCCCCEEEEECCHHEEECCCEEEEEEEECCCEEEEEECCCCCCCCCEEEEHHHHHHH
IKNTPFIVEQFIGQEMKQNTIHLTVLPWVDFTSMTHARDVNFPDSVPKMAFGKLVQQNEQ
HHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
WRMPLSIEVHHGLMDGLHVGQFIQILQAMFDDPSQLEQ
CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHCC
>Mature Secondary Structure 
AYNVLDVNQWARAQHLRFYQGFSHPWYNICSNIDVTALYQYCKQHNHRFFHAYLYLTQQ
CCEEECCHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHHHCCCEEEHHHHHHHHH
ALNQCEPMSYRLVGEEVRIYSPMCISVALLADDNTVRFCDLDHEPTFSNFTLSASKAETL
HHHHCCCCEEEEECCHHEEECCCEEEEEEEECCCEEEEEECCCCCCCCCEEEEHHHHHHH
IKNTPFIVEQFIGQEMKQNTIHLTVLPWVDFTSMTHARDVNFPDSVPKMAFGKLVQQNEQ
HHCCCHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
WRMPLSIEVHHGLMDGLHVGQFIQILQAMFDDPSQLEQ
CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3048245; 3288984; 2187098 [H]