Definition Aliivibrio salmonicida LFI1238 chromosome 1, complete genome.
Accession NC_011312
Length 3,325,165

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The map label for this gene is 209695517

Identifier: 209695517

GI number: 209695517

Start: 2223705

End: 2224043

Strand: Direct

Name: 209695517

Synonym: VSAL_I2071

Alternate gene names: NA

Gene position: 2223705-2224043 (Clockwise)

Preceding gene: 209695514

Following gene: 209695520

Centisome position: 66.88

GC content: 45.13

Gene sequence:

>339_bases
ATGTTTATTCATCATGTTAACGACATCGACTGGCTGGTGATTACCGCTTTTGAAGAACTGAAAACGATGTTTATCGAAGA
AGCGGGTGCGATCCCTTCTTGCTTCTCTACCGCCAGCGAATTGAGCCTGATTGATCAAGCCAAGCGTACTTATGGATATT
TGCCCACACTCAGCGGCGTAATCACCGATACTGGCACTTTTCAAAGCCAAAATAATGAAGAAGATTTGAACCCACAGCTT
GCCTGTCTAGTTGAGGGACGTGGTCGAATATTTATCTATCACGGCGGCTTTGTCGCTTTTGTGGATGACGAGCAAACCTT
TATTACCCGAATGGACTGA

Upstream 100 bases:

>100_bases
ACAAAAATGGCATAGAATTACTGCCTTTATCAACTAAATCTCTACTACGCACTCCCTTGATAGTGATACAATCTCCGCAT
CTGAATTACCGAGAAACTCT

Downstream 100 bases:

>100_bases
AAATAGCGGTATTCTTAGACTTAAGTAAGCTAATGTCAGCCCTGACACAGAGGGCTGACATTAGCCTTCAGGCTTTATAT
CAAACTCGTCATATAAAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGVITDTGTFQSQNNEEDLNPQL
ACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD

Sequences:

>Translated_112_residues
MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGVITDTGTFQSQNNEEDLNPQL
ACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD
>Mature_112_residues
MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGVITDTGTFQSQNNEEDLNPQL
ACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12614; Mature: 12614

Theoretical pI: Translated: 4.08; Mature: 4.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGV
CEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
ITDTGTFQSQNNEEDLNPQLACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD
EECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEEEECCCEEEEECC
>Mature Secondary Structure
MFIHHVNDIDWLVITAFEELKTMFIEEAGAIPSCFSTASELSLIDQAKRTYGYLPTLSGV
CEEECCCCCCEEEEEEHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCE
ITDTGTFQSQNNEEDLNPQLACLVEGRGRIFIYHGGFVAFVDDEQTFITRMD
EECCCCCCCCCCCCCCCCEEEEEEECCCEEEEEECCEEEEEECCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA