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The map label for this gene is tsr [C]

Identifier: 209695521

GI number: 209695521

Start: 2226488

End: 2227576

Strand: Direct

Name: tsr [C]

Synonym: VSAL_I2075

Alternate gene names: 209695521

Gene position: 2226488-2227576 (Clockwise)

Preceding gene: 209695520

Following gene: 209695526

Centisome position: 66.96

GC content: 42.88

Gene sequence:

>1089_bases
ATGTTTGGATTAAAACGAGTCAAAGCAGAAAATGAGGCTCTAAAAAAAGAGCTGTCAAACCTTCAACAAAAATACCAAGC
TGATATTGTCGCATTAGAAAGTCAACTCCAAGACGCTAAACAGCAAGTTAGCTCGGCACAACAACGTTATCAAAGTAGCG
ATGGGTTGATTTCGAGCAGTTTAAAAGGCGGGGACATGCTGCAAACCATTCGAACTGCGATGGTCGAAAGCGCTCAGTCG
ATGGCTCAAGAAAATGAAAATCTACAACAACTCGGTGAGGTTTTTAAACAAACACATCAAGCACTTTCTCGCCTTGACGA
TAGAGCGATTAAGATAAGATCCCAAACCACTCAAAGCATTAAATCTGTTCCAATATTAGATAAAACCGCCAATTCTATCT
CCCACCTTGTATCTACTATTCAAGAGATTTCTGACCAAACAAACTTACTGGCGCTTAACGCTGCAATTGAAGCCGCTCGT
GCAGGAGAAGCAGGCCGAGGGTTTGCTGTCGTTGCTGATGAAGTAAGAAAGCTCGCAAGCAAAGCCAGTGAAGCCAGCGA
GCAAATTGATTCGTTAGTGAACCAAGTTCTGACTCAAGTGGTTGCGATTAAAACCTCTATCGATGAGAACCAAATTTGTG
CCGAAGAGGTCTCCGCTTCTTCTGCACAAATTGGGGTTATCGTAAATGAGGTTGTTGTGAAATCAGAGCATATGAAAGGG
GTTATTTATATCGCTTCAACCAGAGCCTTTCTTGATACTGTCAAACTTGACCATGCAATTTGGAAAAACAATATCTATCG
CTTGCTACAAAGCGGTTCGTTCGGTGAATCCGTGAATACTCATTCAGAATGTCGATTGGGTCAGTGGTACTACAAAGGAG
ATGGTAAAGCCTACGTTCATCTGAAAAGTTATGCGCAGCTTGAAGGGCCTCACAAGGAGGTACATGACAGTGGTCGCGAA
GCGATGAGCAAAGCCAAAACGGGCAATATGCCGGGTATGATCACATCAATTAATGCGATGGAAAATGCCAGTGAACAGGT
CGTGATTCAAATTGATCATCTGATGGACGAAATTGTCGTAACCAAATAG

Upstream 100 bases:

>100_bases
AAACGTCACACAATTCACAAATATACATGACTTTTCATATGACAAAACCAAACAAACCTAGGTACACTCAAAAGATTACT
TAATTAATTTTTTTGAGCTT

Downstream 100 bases:

>100_bases
AACGGTTTGTTTCAATAACAAGTTTAAGTAAACTTTCAAGCCTCCAAACAACCCTGAATGTTTATAATATGTTCAGGGTA
ATGTTTGGTTGCTCAAATAC

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MFGLKRVKAENEALKKELSNLQQKYQADIVALESQLQDAKQQVSSAQQRYQSSDGLISSSLKGGDMLQTIRTAMVESAQS
MAQENENLQQLGEVFKQTHQALSRLDDRAIKIRSQTTQSIKSVPILDKTANSISHLVSTIQEISDQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRKLASKASEASEQIDSLVNQVLTQVVAIKTSIDENQICAEEVSASSAQIGVIVNEVVVKSEHMKG
VIYIASTRAFLDTVKLDHAIWKNNIYRLLQSGSFGESVNTHSECRLGQWYYKGDGKAYVHLKSYAQLEGPHKEVHDSGRE
AMSKAKTGNMPGMITSINAMENASEQVVIQIDHLMDEIVVTK

Sequences:

>Translated_362_residues
MFGLKRVKAENEALKKELSNLQQKYQADIVALESQLQDAKQQVSSAQQRYQSSDGLISSSLKGGDMLQTIRTAMVESAQS
MAQENENLQQLGEVFKQTHQALSRLDDRAIKIRSQTTQSIKSVPILDKTANSISHLVSTIQEISDQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRKLASKASEASEQIDSLVNQVLTQVVAIKTSIDENQICAEEVSASSAQIGVIVNEVVVKSEHMKG
VIYIASTRAFLDTVKLDHAIWKNNIYRLLQSGSFGESVNTHSECRLGQWYYKGDGKAYVHLKSYAQLEGPHKEVHDSGRE
AMSKAKTGNMPGMITSINAMENASEQVVIQIDHLMDEIVVTK
>Mature_362_residues
MFGLKRVKAENEALKKELSNLQQKYQADIVALESQLQDAKQQVSSAQQRYQSSDGLISSSLKGGDMLQTIRTAMVESAQS
MAQENENLQQLGEVFKQTHQALSRLDDRAIKIRSQTTQSIKSVPILDKTANSISHLVSTIQEISDQTNLLALNAAIEAAR
AGEAGRGFAVVADEVRKLASKASEASEQIDSLVNQVLTQVVAIKTSIDENQICAEEVSASSAQIGVIVNEVVVKSEHMKG
VIYIASTRAFLDTVKLDHAIWKNNIYRLLQSGSFGESVNTHSECRLGQWYYKGDGKAYVHLKSYAQLEGPHKEVHDSGRE
AMSKAKTGNMPGMITSINAMENASEQVVIQIDHLMDEIVVTK

Specific function: Receptor For The Attractant L-Serine And Related Amino Acids. Is Also Responsible For Chemotaxis Away From A Wide Range Of Repellents, Including Leucine, Indole, And Weak Acids. Chemotactic-Signal Transducers Respond To Changes In The Concentration Of At

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=183, Percent_Identity=34.4262295081967, Blast_Score=85, Evalue=7e-18,
Organism=Escherichia coli, GI1787690, Length=127, Percent_Identity=40.1574803149606, Blast_Score=82, Evalue=6e-17,
Organism=Escherichia coli, GI1788195, Length=129, Percent_Identity=38.7596899224806, Blast_Score=82, Evalue=8e-17,
Organism=Escherichia coli, GI1788194, Length=68, Percent_Identity=55.8823529411765, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1789453, Length=78, Percent_Identity=50, Blast_Score=75, Evalue=8e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003018
- InterPro:   IPR003660
- InterPro:   IPR016132 [H]

Pfam domain/function: PF01590 GAF; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 39690; Mature: 39690

Theoretical pI: Translated: 6.25; Mature: 6.25

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFGLKRVKAENEALKKELSNLQQKYQADIVALESQLQDAKQQVSSAQQRYQSSDGLISSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
LKGGDMLQTIRTAMVESAQSMAQENENLQQLGEVFKQTHQALSRLDDRAIKIRSQTTQSI
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVPILDKTANSISHLVSTIQEISDQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAS
HCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KASEASEQIDSLVNQVLTQVVAIKTSIDENQICAEEVSASSAQIGVIVNEVVVKSEHMKG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCE
VIYIASTRAFLDTVKLDHAIWKNNIYRLLQSGSFGESVNTHSECRLGQWYYKGDGKAYVH
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEE
LKSYAQLEGPHKEVHDSGREAMSKAKTGNMPGMITSINAMENASEQVVIQIDHLMDEIVV
EEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCEEEEHHHHHHHHHC
TK
CC
>Mature Secondary Structure
MFGLKRVKAENEALKKELSNLQQKYQADIVALESQLQDAKQQVSSAQQRYQSSDGLISSS
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCC
LKGGDMLQTIRTAMVESAQSMAQENENLQQLGEVFKQTHQALSRLDDRAIKIRSQTTQSI
CCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSVPILDKTANSISHLVSTIQEISDQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAS
HCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHHH
KASEASEQIDSLVNQVLTQVVAIKTSIDENQICAEEVSASSAQIGVIVNEVVVKSEHMKG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCE
VIYIASTRAFLDTVKLDHAIWKNNIYRLLQSGSFGESVNTHSECRLGQWYYKGDGKAYVH
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCEEEEE
LKSYAQLEGPHKEVHDSGREAMSKAKTGNMPGMITSINAMENASEQVVIQIDHLMDEIVV
EEHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHCCCCCEEEEHHHHHHHHHC
TK
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]