Definition Methanopyrus kandleri AV19, complete genome.
Accession NC_003551
Length 1,694,969

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The map label for this gene is fae-hps [H]

Identifier: 20094711

GI number: 20094711

Start: 1271731

End: 1272240

Strand: Reverse

Name: fae-hps [H]

Synonym: MK1275

Alternate gene names: 20094711

Gene position: 1272240-1271731 (Counterclockwise)

Preceding gene: 20094712

Following gene: 20094710

Centisome position: 75.06

GC content: 63.33

Gene sequence:

>510_bases
ATGCCGTTCGCGTTACGCGTCGGGGAGGCCTTCGTAGGCGAGCCGGATGAACCCGAGATAGCACACATCGACCTGGTCAT
GGGGTCCGTGGAAGGTCCGGTCGGTCGAGCGTTCGCCGAGGCCCTCGCGAGTCCCTCCAAGGGACACACGCCGCTCCTCG
CCGTCCTGACGCCCGGAGTCGCCGTCCGACCGCCCACACTGATCACACCCACGGTCACCATCGAGAACATGGCCCAGGGG
GAGAAGATCTTCGGTCCTGTGCAGCGGGGGATCGCGGAGGCGGTCGTCGAGTCCGTGGAGGAGGGGATAATCCCCCGCGA
CATCGTCGACGACGTGGTCATAATAGCGAACACCTTCGTGCACCCGGAGGCCGAGGACGATCGTCGGCTCTACGAGAACA
ACAAGGAGGCCATGAAGAAAGCTATCGAGTGCGCCATGAAGGGTGAGCCGACCATCGACGAACTGATCGAGAAGAAAGAC
GAGGTCGAGCACCCGCTCGCCAAGTTCTGA

Upstream 100 bases:

>100_bases
CGCTCGGCGCGGCGATCGGTATTTCTTTAGCCCTTTTGATTCTCGCTGAAGTTAAGGTGCACTTATACTATGGACGAGCT
GAAGTACGAGGGCGATCCCT

Downstream 100 bases:

>100_bases
CCGCTCGAGGGCATCTCCGTGGTACACACAGGAACGTCCCGACGCGCCCTCTCGGTATCCCCTTTCTCTCTCGACTACCG
TGACGATTTCCGGGCGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Formaldehyde-activating enzyme; Fae; 3-hexulose-6-phosphate synthase; HPS; D-arabino-3-hexulose-6-phosphate formaldehyde lyase [H]

Number of amino acids: Translated: 169; Mature: 168

Protein sequence:

>169_residues
MPFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGVAVRPPTLITPTVTIENMAQG
EKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFVHPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKD
EVEHPLAKF

Sequences:

>Translated_169_residues
MPFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGVAVRPPTLITPTVTIENMAQG
EKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFVHPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKD
EVEHPLAKF
>Mature_168_residues
PFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGVAVRPPTLITPTVTIENMAQGE
KIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFVHPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKDE
VEHPLAKF

Specific function: Catalyzes the formation of ribulose-5-phosphate and formaldehyde from 3-hexulose-6-phosphate [H]

COG id: COG1795

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the HPS/KGPDC family. HPS subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR020868
- InterPro:   IPR014826
- InterPro:   IPR001754
- InterPro:   IPR020568
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF08714 Fae; PF00215 OMPdecase [H]

EC number: =4.1.2.43 [H]

Molecular weight: Translated: 18286; Mature: 18155

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGV
CCCEEECCHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCC
AVRPPTLITPTVTIENMAQGEKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFV
EECCCCEECCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
HPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKDEVEHPLAKF
CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCC
>Mature Secondary Structure 
PFALRVGEAFVGEPDEPEIAHIDLVMGSVEGPVGRAFAEALASPSKGHTPLLAVLTPGV
CCEEECCHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCC
AVRPPTLITPTVTIENMAQGEKIFGPVQRGIAEAVVESVEEGIIPRDIVDDVVIIANTFV
EECCCCEECCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCC
HPEAEDDRRLYENNKEAMKKAIECAMKGEPTIDELIEKKDEVEHPLAKF
CCCCCHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA