Definition Geobacter bemidjiensis Bem chromosome, complete genome.
Accession NC_011146
Length 4,615,150

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The map label for this gene is 197116900

Identifier: 197116900

GI number: 197116900

Start: 608857

End: 609387

Strand: Direct

Name: 197116900

Synonym: Gbem_0502

Alternate gene names: NA

Gene position: 608857-609387 (Clockwise)

Preceding gene: 197116896

Following gene: 197116901

Centisome position: 13.19

GC content: 42.94

Gene sequence:

>531_bases
ATGGTGGAGGATGATGATCGTGGTGTTGGCAGCAGGTGGTGGAAGTGGGTGTGCTATGTACAAGTGAATGCAACTGACCT
TGAGCTGCTGGCACGTCAGCCTGCAATGCATGTGTGCAATAAAGTCATGGCTAGCAATCTATTCTTGCAACTAACTATGA
CTTCATATAGAGTTTGTATCATGAAGTTATTTACTGCTAATTCCACAACGAAAAAATTTATGCTGCCTTTAATCCTGGCT
GTAGCAGTCTTTTTTGTTACGCAAGGGATAGAAGTACCTAATTTCAGTGATTTGCTGGAACCTCAGCTTTCCTTGTCACA
GAAATCCAACGGCTCCGATACCGCTGTTGTTAAAACTCTGACAAAATGCTCGCATATAAAATCCATAAAAAACGTCAATT
TTTCAGCTCTCGTCAGCAATGCATTCCAGATAAATAGTCCAGTCGTTCCCGTTACGGTTTTTCAGCATCAATCCCAATCC
TTTATCTCGTCTGTAGTCTCAATTCTTCCTGCCAGAGCACCACCCGCGTAG

Upstream 100 bases:

>100_bases
AGGGTGAGGAAGAAGGAGAGAGGAGGAGGAGAGAGAGGAGGAGGTGGTGGTGAAATGGTGGAGGAGGTGGTGGTGAAATG
GTGGAGGAGGTGGTGGTGAA

Downstream 100 bases:

>100_bases
CACACATCATTCCTCAGTAGCAGCCATAGTTTGCACTTTCCGCGCGTTTTTTTGCGCAGGAAAAAATGCGTTCGCAGCGT
ATTCATTTTTTAATGCACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 176

Protein sequence:

>176_residues
MVEDDDRGVGSRWWKWVCYVQVNATDLELLARQPAMHVCNKVMASNLFLQLTMTSYRVCIMKLFTANSTTKKFMLPLILA
VAVFFVTQGIEVPNFSDLLEPQLSLSQKSNGSDTAVVKTLTKCSHIKSIKNVNFSALVSNAFQINSPVVPVTVFQHQSQS
FISSVVSILPARAPPA

Sequences:

>Translated_176_residues
MVEDDDRGVGSRWWKWVCYVQVNATDLELLARQPAMHVCNKVMASNLFLQLTMTSYRVCIMKLFTANSTTKKFMLPLILA
VAVFFVTQGIEVPNFSDLLEPQLSLSQKSNGSDTAVVKTLTKCSHIKSIKNVNFSALVSNAFQINSPVVPVTVFQHQSQS
FISSVVSILPARAPPA
>Mature_176_residues
MVEDDDRGVGSRWWKWVCYVQVNATDLELLARQPAMHVCNKVMASNLFLQLTMTSYRVCIMKLFTANSTTKKFMLPLILA
VAVFFVTQGIEVPNFSDLLEPQLSLSQKSNGSDTAVVKTLTKCSHIKSIKNVNFSALVSNAFQINSPVVPVTVFQHQSQS
FISSVVSILPARAPPA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19481; Mature: 19481

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEDDDRGVGSRWWKWVCYVQVNATDLELLARQPAMHVCNKVMASNLFLQLTMTSYRVCI
CCCCCCCCCCHHHEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHHHH
MKLFTANSTTKKFMLPLILAVAVFFVTQGIEVPNFSDLLEPQLSLSQKSNGSDTAVVKTL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHCCCCCCHHHHHHHH
TKCSHIKSIKNVNFSALVSNAFQINSPVVPVTVFQHQSQSFISSVVSILPARAPPA
HHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVEDDDRGVGSRWWKWVCYVQVNATDLELLARQPAMHVCNKVMASNLFLQLTMTSYRVCI
CCCCCCCCCCHHHEEEEEEEEECCHHHHHHHCCHHHHHHHHHHHHHHHEEEHHHHHHHHH
MKLFTANSTTKKFMLPLILAVAVFFVTQGIEVPNFSDLLEPQLSLSQKSNGSDTAVVKTL
HHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCHHHHHHCCCCCCHHHHHHHH
TKCSHIKSIKNVNFSALVSNAFQINSPVVPVTVFQHQSQSFISSVVSILPARAPPA
HHHHHHHHHHCCCHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA