| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is mjaIM [H]
Identifier: 189499109
GI number: 189499109
Start: 109124
End: 110071
Strand: Direct
Name: mjaIM [H]
Synonym: Cphamn1_0117
Alternate gene names: 189499109
Gene position: 109124-110071 (Clockwise)
Preceding gene: 189499108
Following gene: 189499110
Centisome position: 3.99
GC content: 49.58
Gene sequence:
>948_bases TTGCCTTTATCGGTTTCCACGCTTGAAAACCCTCAAACCGATATACCTCGTATTGCAAAGGATCGACAACTGATCAGCAA AATCGAAGCGGGAGTACAACAGATTGAGACAAATCACAGATTGGTCACTGGAGATGCTCGCAAGTTAGGCTTTATCGAAG ATGAATCAGTTCATCTTGTGGTTACCTCCCCCCCCTATTGGACACTGAAGAAGTATCGAGATTATGAGAATCAGTTGGGT GATGTGGCTGATTATGAAGAGTTTCTTACTGAGCTCGACAAGGTTTGGGAACATTGCTACCGGGTTCTTGTTCCGGGCGG CAGGTTGATTTGCGTTGTCGGTGACGTCTGTCTTTCCAGGAGAAAAAATGACGGACGCCATACTGTCGTGCCTCTTCATG CGTCCATTCAGGAGCATTGCAGAAAGATGGGTTTCGATAATCTGTCGCCTATTATCTGGCACAAGATTGCAAACGCCTCT TACGAGGCGAACGGGAACGGCGGGGGTTTCCTGGGAAAACCCTATGAGCCGAATGCAGTGATCAAGAACGATATCGAGTA CATCCTGATGGAGCGCAAGCCAGGCGGCTATCGTAAACCTTCGGTTGCTACGCGCGTGCTGTCGGTCATATCTGATGAAA ACCACAGGCAATGGTTTCAGTCAATATGGACTGGTCTTACCGGTGCGTCAACCAGAACTCATCCCGCCCCCTATCCCGAG GGGTTGGTTGAGCGTCTGATTCGTATGTTTTCCTTTGTCGGCGACACTGTGCTTGATCCCTTTATGGGAACAGGTACGAC AACAGTAGCGGCTGCGAAATGGGGCAGGAATTCAATCGGTGTGGAAATCGATCCGCATTACTATGCAATGGCCGAGAAGC GCATTCGTCAGGCAACGGCATCCCTGTTTTCCACGGCGGAAATCGTAACGCAGGCAAAAAGCGTATAA
Upstream 100 bases:
>100_bases GAATGTTTTTATATTCAAAGATACAGATAACAGTGAATGAAAATATGAATACAGTTTGAATACAATATTTGATATAGCAA CCAAGACTCACGAGCAGTGT
Downstream 100 bases:
>100_bases GTATGGATTTGAACACAAGGGTTGCAAAAGCGGTTCGCCACTTCTGGAAAGTAAGAACCCGACAGCACAAGAAGCAGGGT TCTTCGACGGGAAAAAAAGA
Product: DNA methylase N-4/N-6 domain-containing protein
Products: NA
Alternate protein names: M.MjaI; N-4 cytosine-specific methyltransferase MjaI [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MPLSVSTLENPQTDIPRIAKDRQLISKIEAGVQQIETNHRLVTGDARKLGFIEDESVHLVVTSPPYWTLKKYRDYENQLG DVADYEEFLTELDKVWEHCYRVLVPGGRLICVVGDVCLSRRKNDGRHTVVPLHASIQEHCRKMGFDNLSPIIWHKIANAS YEANGNGGGFLGKPYEPNAVIKNDIEYILMERKPGGYRKPSVATRVLSVISDENHRQWFQSIWTGLTGASTRTHPAPYPE GLVERLIRMFSFVGDTVLDPFMGTGTTTVAAAKWGRNSIGVEIDPHYYAMAEKRIRQATASLFSTAEIVTQAKSV
Sequences:
>Translated_315_residues MPLSVSTLENPQTDIPRIAKDRQLISKIEAGVQQIETNHRLVTGDARKLGFIEDESVHLVVTSPPYWTLKKYRDYENQLG DVADYEEFLTELDKVWEHCYRVLVPGGRLICVVGDVCLSRRKNDGRHTVVPLHASIQEHCRKMGFDNLSPIIWHKIANAS YEANGNGGGFLGKPYEPNAVIKNDIEYILMERKPGGYRKPSVATRVLSVISDENHRQWFQSIWTGLTGASTRTHPAPYPE GLVERLIRMFSFVGDTVLDPFMGTGTTTVAAAKWGRNSIGVEIDPHYYAMAEKRIRQATASLFSTAEIVTQAKSV >Mature_314_residues PLSVSTLENPQTDIPRIAKDRQLISKIEAGVQQIETNHRLVTGDARKLGFIEDESVHLVVTSPPYWTLKKYRDYENQLGD VADYEEFLTELDKVWEHCYRVLVPGGRLICVVGDVCLSRRKNDGRHTVVPLHASIQEHCRKMGFDNLSPIIWHKIANASY EANGNGGGFLGKPYEPNAVIKNDIEYILMERKPGGYRKPSVATRVLSVISDENHRQWFQSIWTGLTGASTRTHPAPYPEG LVERLIRMFSFVGDTVLDPFMGTGTTTVAAAKWGRNSIGVEIDPHYYAMAEKRIRQATASLFSTAEIVTQAKSV
Specific function: This methylase recognizes the double-stranded sequence CTAG, causes specific methylation on C-1 on both strands, and protects the DNA from cleavage by the MjaI endonuclease (Potential) [H]
COG id: COG0863
COG function: function code L; DNA modification methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family. N(4) subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082238, Length=286, Percent_Identity=28.6713286713287, Blast_Score=75, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002941 - InterPro: IPR017985 - InterPro: IPR001091 [H]
Pfam domain/function: PF01555 N6_N4_Mtase [H]
EC number: =2.1.1.113 [H]
Molecular weight: Translated: 35371; Mature: 35239
Theoretical pI: Translated: 7.66; Mature: 7.66
Prosite motif: PS00093 N4_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLSVSTLENPQTDIPRIAKDRQLISKIEAGVQQIETNHRLVTGDARKLGFIEDESVHLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCEEEE VTSPPYWTLKKYRDYENQLGDVADYEEFLTELDKVWEHCYRVLVPGGRLICVVGDVCLSR EECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHC RKNDGRHTVVPLHASIQEHCRKMGFDNLSPIIWHKIANASYEANGNGGGFLGKPYEPNAV CCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH IKNDIEYILMERKPGGYRKPSVATRVLSVISDENHRQWFQSIWTGLTGASTRTHPAPYPE HHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH GLVERLIRMFSFVGDTVLDPFMGTGTTTVAAAKWGRNSIGVEIDPHYYAMAEKRIRQATA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHH SLFSTAEIVTQAKSV HHHHHHHHHHHHCCC >Mature Secondary Structure PLSVSTLENPQTDIPRIAKDRQLISKIEAGVQQIETNHRLVTGDARKLGFIEDESVHLV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHCCCCCCCCEEEE VTSPPYWTLKKYRDYENQLGDVADYEEFLTELDKVWEHCYRVLVPGGRLICVVGDVCLSR EECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHC RKNDGRHTVVPLHASIQEHCRKMGFDNLSPIIWHKIANASYEANGNGGGFLGKPYEPNAV CCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH IKNDIEYILMERKPGGYRKPSVATRVLSVISDENHRQWFQSIWTGLTGASTRTHPAPYPE HHCCCEEEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCHH GLVERLIRMFSFVGDTVLDPFMGTGTTTVAAAKWGRNSIGVEIDPHYYAMAEKRIRQATA HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHH SLFSTAEIVTQAKSV HHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]