| Definition | Chlorobium phaeobacteroides BS1 chromosome, complete genome. |
|---|---|
| Accession | NC_010831 |
| Length | 2,736,403 |
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The map label for this gene is 189499108
Identifier: 189499108
GI number: 189499108
Start: 107282
End: 108520
Strand: Direct
Name: 189499108
Synonym: Cphamn1_0115
Alternate gene names: NA
Gene position: 107282-108520 (Clockwise)
Preceding gene: 189499107
Following gene: 189499109
Centisome position: 3.92
GC content: 49.07
Gene sequence:
>1239_bases ATGAGAAGCAACAGAAAAAGAATTACTATCAAGGCGATATCGCGTAGACTTCCTCGCAGTTTCCGTTCACTCTACACGTC ATTGCGGTTCTGTCTTAAGTGGTTTCGAACACTCAGGGTTGAGTTCCGGGTTCTTGAAGGGCAAGAGCCCGGAAGTCGCT CGCCACTCTCAATTCTGTGCGCCGCAGGAGAGAAGGACAGGAACTATCTTGCCGGACTTGCTTTCGGGGAAGACTATCGC GAGAGGTTTCTCTGTCGAGCCTGGTTGTGGAACGCCAACAGGGTGAGCGGGAAAAATGATGGCAGGTATGCCATGATGTT CGTCAAGATCCACAAATCTCAGCGCTGGATACTCGGATCAGGTAACCGGTTTTCCATACCTGACTGGGTGATAGGGGAGG TTGCTTTGCCCGTCGATTCAGGGAGCATGACTGCCGAGAAAGTCAAGTCGGACACAAGAAGAATCCGGACAAACGGTCTT GAGTATGAGGTCACGCGGGATATCAAAAGGTTTGATGATTTTTATCACAATATGTATCTGCCTCATATCCTCAGGGTTCA TGGCAGAAGCGCTTTTGTGACGCCCTACGAGCTCATGAGAAAGCGCCTCGAACATTGTGACCTGCTCCTGGTGATGAAAC AGGGCGAGCCGATTTCCGGATGCATGATTTCGTATTTCGAGGCGGTACCCCGTATGAAATCTCTGGGGGTGCGCGACGGC GACCCGGAGTATCTCAAGTTCGGCGCGACAGGGGCGCTGTACTATTTTTCCCTGCTCTATTTGGAGGGAAAGGGATTTCC CTGGATTGGATTAGGCGGATCAAGAGCATTTCTGCACGACGGCGTACTTCGATACAAGAGAAAATGGGCTCAGAAGCTCG TTGACTCCTCCCCGGATATATTTGAATTCAGGATACTTGCAGACTCAAACGCAACAAGATCATTTCTGAGGAGCAACCCG TTCATTTTTAAGAAACGCGGGTCGCTGTATGCCGCGGTTTTTGTTGATAGGGAAAGGCCGCTTGATCCAAAGGAGCTTGG CCGGATCGGCAAAGAGTATCTCTATCCCGGCTTGTCAAAACTGTATGTGTATGTTTTTCAGCAAAACCTTCCGGAATATC CGAACACAGTTTCCGAAGAACTTTCTGATCGGCTTGTTATCCAATCCGCGGAAAAGGTCATGGGTGGACACTACAATAGT AAGATGGTAACTGATTTAAATATATTGTTGAATGCATAA
Upstream 100 bases:
>100_bases AGTGGAGAATAGGAACATCAGACAGTATTGCTGCTTTCATCCTGATGGTTGCTTTTACACTGAGGTCCTATGCGAAGCGC TTGATTCAGGTTCGCACGTG
Downstream 100 bases:
>100_bases AGCAACGAGTAAAATTGATCTTGCTTTATGCAATTCAACTACGGATATCATCATTCGCTTTTCGGAGGAAGCCGATGCAG GCATGCTTGCAGCCTGTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 412; Mature: 412
Protein sequence:
>412_residues MRSNRKRITIKAISRRLPRSFRSLYTSLRFCLKWFRTLRVEFRVLEGQEPGSRSPLSILCAAGEKDRNYLAGLAFGEDYR ERFLCRAWLWNANRVSGKNDGRYAMMFVKIHKSQRWILGSGNRFSIPDWVIGEVALPVDSGSMTAEKVKSDTRRIRTNGL EYEVTRDIKRFDDFYHNMYLPHILRVHGRSAFVTPYELMRKRLEHCDLLLVMKQGEPISGCMISYFEAVPRMKSLGVRDG DPEYLKFGATGALYYFSLLYLEGKGFPWIGLGGSRAFLHDGVLRYKRKWAQKLVDSSPDIFEFRILADSNATRSFLRSNP FIFKKRGSLYAAVFVDRERPLDPKELGRIGKEYLYPGLSKLYVYVFQQNLPEYPNTVSEELSDRLVIQSAEKVMGGHYNS KMVTDLNILLNA
Sequences:
>Translated_412_residues MRSNRKRITIKAISRRLPRSFRSLYTSLRFCLKWFRTLRVEFRVLEGQEPGSRSPLSILCAAGEKDRNYLAGLAFGEDYR ERFLCRAWLWNANRVSGKNDGRYAMMFVKIHKSQRWILGSGNRFSIPDWVIGEVALPVDSGSMTAEKVKSDTRRIRTNGL EYEVTRDIKRFDDFYHNMYLPHILRVHGRSAFVTPYELMRKRLEHCDLLLVMKQGEPISGCMISYFEAVPRMKSLGVRDG DPEYLKFGATGALYYFSLLYLEGKGFPWIGLGGSRAFLHDGVLRYKRKWAQKLVDSSPDIFEFRILADSNATRSFLRSNP FIFKKRGSLYAAVFVDRERPLDPKELGRIGKEYLYPGLSKLYVYVFQQNLPEYPNTVSEELSDRLVIQSAEKVMGGHYNS KMVTDLNILLNA >Mature_412_residues MRSNRKRITIKAISRRLPRSFRSLYTSLRFCLKWFRTLRVEFRVLEGQEPGSRSPLSILCAAGEKDRNYLAGLAFGEDYR ERFLCRAWLWNANRVSGKNDGRYAMMFVKIHKSQRWILGSGNRFSIPDWVIGEVALPVDSGSMTAEKVKSDTRRIRTNGL EYEVTRDIKRFDDFYHNMYLPHILRVHGRSAFVTPYELMRKRLEHCDLLLVMKQGEPISGCMISYFEAVPRMKSLGVRDG DPEYLKFGATGALYYFSLLYLEGKGFPWIGLGGSRAFLHDGVLRYKRKWAQKLVDSSPDIFEFRILADSNATRSFLRSNP FIFKKRGSLYAAVFVDRERPLDPKELGRIGKEYLYPGLSKLYVYVFQQNLPEYPNTVSEELSDRLVIQSAEKVMGGHYNS KMVTDLNILLNA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47754; Mature: 47754
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSNRKRITIKAISRRLPRSFRSLYTSLRFCLKWFRTLRVEFRVLEGQEPGSRSPLSILC CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEE AAGEKDRNYLAGLAFGEDYRERFLCRAWLWNANRVSGKNDGRYAMMFVKIHKSQRWILGS ECCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEEEC GNRFSIPDWVIGEVALPVDSGSMTAEKVKSDTRRIRTNGLEYEVTRDIKRFDDFYHNMYL CCCCCCCCCEECEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH PHILRVHGRSAFVTPYELMRKRLEHCDLLLVMKQGEPISGCMISYFEAVPRMKSLGVRDG HHHHHHCCCCEEECHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC DPEYLKFGATGALYYFSLLYLEGKGFPWIGLGGSRAFLHDGVLRYKRKWAQKLVDSSPDI CCCCEEECCCHHHHHHEEHEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCE FEFRILADSNATRSFLRSNPFIFKKRGSLYAAVFVDRERPLDPKELGRIGKEYLYPGLSK EEEEEEECCCHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHH LYVYVFQQNLPEYPNTVSEELSDRLVIQSAEKVMGGHYNSKMVTDLNILLNA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC >Mature Secondary Structure MRSNRKRITIKAISRRLPRSFRSLYTSLRFCLKWFRTLRVEFRVLEGQEPGSRSPLSILC CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCEEEEE AAGEKDRNYLAGLAFGEDYRERFLCRAWLWNANRVSGKNDGRYAMMFVKIHKSQRWILGS ECCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCEEEEEC GNRFSIPDWVIGEVALPVDSGSMTAEKVKSDTRRIRTNGLEYEVTRDIKRFDDFYHNMYL CCCCCCCCCEECEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH PHILRVHGRSAFVTPYELMRKRLEHCDLLLVMKQGEPISGCMISYFEAVPRMKSLGVRDG HHHHHHCCCCEEECHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC DPEYLKFGATGALYYFSLLYLEGKGFPWIGLGGSRAFLHDGVLRYKRKWAQKLVDSSPDI CCCCEEECCCHHHHHHEEHEECCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCE FEFRILADSNATRSFLRSNPFIFKKRGSLYAAVFVDRERPLDPKELGRIGKEYLYPGLSK EEEEEEECCCHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCHHH LYVYVFQQNLPEYPNTVSEELSDRLVIQSAEKVMGGHYNSKMVTDLNILLNA HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA