Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189026107

Identifier: 189026107

GI number: 189026107

Start: 962832

End: 963920

Strand: Reverse

Name: 189026107

Synonym: TPASS_0884

Alternate gene names: NA

Gene position: 963920-962832 (Counterclockwise)

Preceding gene: 189026108

Following gene: 189026106

Centisome position: 84.59

GC content: 45.09

Gene sequence:

>1089_bases
GTGTACGTGTGCGAGGTAGTGTTCAAACACATCCTGGTGGGCGTGCTGTGCTTTTTCTTGGTTTTTTTTGTGAACAACGT
ACTGCTTTTTGCGCAGACATTACTTACCAAGCACGTGAGCGCTGCGGACGTGGTCCGGCTGTTGCTGTATTCCATTCCCG
CTGCGTTGATTTACGTTACTCCTTTTGCCGTGTTGGTCGGTTCCCTCTTGGGGTTGGGGCGGCTGCGTAACAACCTTGAA
CTGCTTGCGCTGCAAGTGCTGGGCGTTTCGCCGCGGTTTTTGATATTCCCTCTTTTGTCGATTGGTTTGTGCAGTGCGCT
TTTTGTATTTGTTTTTAGCGACGTGGTGGTACCTGCAAGCTTTATACGATTAAGGCAGGTGTATTGGCGCGTACTCAGTT
CCGTGCCATCCTTGGGATTTGAATCTCACACAACTAGAAAACACAATGGGGTTATACTGTCGGTTGGTGAAGTATTTCAC
TCCGTTATGTATCAACTTTTAATTGTCGACAAAAGCGATTCCCGTAGTTTGAAGGTTGTGAGTAGTAGAAAGTCCGTACT
CGAATCGAGCGCAGATCAAACTGTACCGTTTACGATACGAATGCATGATCCTTGTATGCTCATTGTATATCGCACCCGCC
CCCGTATTTGCGATCTCATTTACGGTGGAAGAGCTGACTATCACGTGCATACGCAGCAAACACAACCAGAGTATTTTATG
GGATTGGGGCCGGGTGGCTTTTCGACCTGTAGTTTATACCGGGAGATACAGGAAAAAATAAAAGCAAAGGAAAACCCGAG
ACATATCGCGACGTACCAATTGGAATTCCAAAAAAAATTTTCTCACCCGATAAGCGTAGTGCTTTTTATTTTTTTGTCTT
TTGGTTTGAGTACACTTAGCAATATTTCTTCCCAGGGGAAAGGATTTGTAGGAGGGCTTATTGTTGTACTAGGGTATTGG
ATTATCTCTATCGGAGGACAAGAACTTGCGTTGAGGCTTAGTATTGTTCCTTCCCTTGCACTGTGGATTCCAAACGCCGC
ATTGTTTTTTACTGCATTGATTTTGTCAATGAGAAAATCTGCAGTATGA

Upstream 100 bases:

>100_bases
ATGTGCGCTCCGGTAGTATCTCGCTGACTGAACGGGGAAAAGGAGGGTACGGATCCACAGGGGTTCTGTAGTTACCTAGA
TGTGGAGAAGAGTGCTTTTT

Downstream 100 bases:

>100_bases
AAATACTGCAGGTGTATATGTTGGACATGTTCTTACCAATTTTTTTTCTAGTGCTCGTGTGTGCGAGTATGATTCTCGAT
GCTATTGATATTCTGGTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MYVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVTPFAVLVGSLLGLGRLRNNLE
LLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPASFIRLRQVYWRVLSSVPSLGFESHTTRKHNGVILSVGEVFH
SVMYQLLIVDKSDSRSLKVVSSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYFM
GLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTLSNISSQGKGFVGGLIVVLGYW
IISIGGQELALRLSIVPSLALWIPNAALFFTALILSMRKSAV

Sequences:

>Translated_362_residues
MYVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVTPFAVLVGSLLGLGRLRNNLE
LLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPASFIRLRQVYWRVLSSVPSLGFESHTTRKHNGVILSVGEVFH
SVMYQLLIVDKSDSRSLKVVSSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYFM
GLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTLSNISSQGKGFVGGLIVVLGYW
IISIGGQELALRLSIVPSLALWIPNAALFFTALILSMRKSAV
>Mature_362_residues
MYVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVTPFAVLVGSLLGLGRLRNNLE
LLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPASFIRLRQVYWRVLSSVPSLGFESHTTRKHNGVILSVGEVFH
SVMYQLLIVDKSDSRSLKVVSSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYFM
GLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTLSNISSQGKGFVGGLIVVLGYW
IISIGGQELALRLSIVPSLALWIPNAALFFTALILSMRKSAV

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40352; Mature: 40352

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: PS01258 BH2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PFAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPAS
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIRLRQVYWRVLSSVPSLGFESHTTRKHNGVILSVGEVFHSVMYQLLIVDKSDSRSLKVV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHEECCCCCCCHHHH
SSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYFM
HHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHCCCCCCEEEECCCCCCCCEE
GLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTLS
EECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHH
NISSQGKGFVGGLIVVLGYWIISIGGQELALRLSIVPSLALWIPNAALFFTALILSMRKS
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AV
CC
>Mature Secondary Structure
MYVCEVVFKHILVGVLCFFLVFFVNNVLLFAQTLLTKHVSAADVVRLLLYSIPAALIYVT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
PFAVLVGSLLGLGRLRNNLELLALQVLGVSPRFLIFPLLSIGLCSALFVFVFSDVVVPAS
HHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FIRLRQVYWRVLSSVPSLGFESHTTRKHNGVILSVGEVFHSVMYQLLIVDKSDSRSLKVV
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHEECCCCCCCHHHH
SSRKSVLESSADQTVPFTIRMHDPCMLIVYRTRPRICDLIYGGRADYHVHTQQTQPEYFM
HHHHHHHHCCCCCCCCEEEEECCCEEEEEECCCCCHHHHHCCCCCCEEEECCCCCCCCEE
GLGPGGFSTCSLYREIQEKIKAKENPRHIATYQLEFQKKFSHPISVVLFIFLSFGLSTLS
EECCCCHHHHHHHHHHHHHHHCCCCCCEEEEEEEHHHHHHCCHHHHHHHHHHHHHHHHHH
NISSQGKGFVGGLIVVLGYWIISIGGQELALRLSIVPSLALWIPNAALFFTALILSMRKS
HHHHCCCCHHHHHHHHHHHHHHHCCCHHHEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHH
AV
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA