Definition Treponema pallidum subsp. pallidum SS14, complete genome.
Accession NC_010741
Length 1,139,457

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The map label for this gene is 189026106

Identifier: 189026106

GI number: 189026106

Start: 961717

End: 962814

Strand: Reverse

Name: 189026106

Synonym: TPASS_0883

Alternate gene names: NA

Gene position: 962814-961717 (Counterclockwise)

Preceding gene: 189026107

Following gene: 189026105

Centisome position: 84.5

GC content: 37.92

Gene sequence:

>1098_bases
ATGTTGGACATGTTCTTACCAATTTTTTTTCTAGTGCTCGTGTGTGCGAGTATGATTCTCGATGCTATTGATATTCTGGT
TAATCTTACGCAGTTTATTTCGAATGGGTATCGTTTTTCTTCTTTGGTGAAGATATGGTATGTATCTATCCCACATTATG
TACTGCTGTGCTGTCCTTTGTCTGTGCTTTTTGCTGCAACGTATACTGTGCGAATCTTGTATGTCCAAAATGAATTTCTT
GCCATCCATTTCGGTGGGTTATCTTTTTTTAGTATCGTAGGCCCGTGGTTTGGTTTTATGTGTTTCTTAGCAATTGGAAT
ATTTGCATTTGACAATAGTGTGGTAGTTGTTTCTCAGTCAAAAAAGGATGAAATCATTGCACGTACTGTGAGCTATGCTC
AGGGGAATAGTGAAAATGACGTTGTTGCTTCTTCTTTTGATGGTAAGATAATCTCCATTGCGGGTGCGTATCACAGAGGA
CAAAAGGTGCTCGTTGATATGTTAGTTATTATGAAAAATAGTAACGGTACTATTCAGAAGCTTATCGAAGCACACACTGC
ACATTGGCAGAAAGACAGGTGGGTTCTTATAAAACCGGTTGTATATACTATCACTCATGAAATGAAACTTATGGTTTCTG
AATATCTTGATTCTTTCGAGTTGAGAGAACCGCTTGAATTATTTGATCATCAGGATTTTTTAACAAAAGGKATGTCCATC
CAGAAAATAAAAGAGACGCTTCATACGTTAAAATATGCGTCAAAGCCTCATAGAGAGTTGTCAATCCGATTCTACAAGAA
ATTTTATTTTCCTCTTACGATGTGCATTATGCTCTGTTTGTCCTTTTTGACAGGTTCTTTTCTAAAAAAGAGATCGCTCA
TCATGTACATCTTTTGTAGTGTAGTCCTTGCAAGCGCATACTATGTTGTTGAAATGACGAGTATCGTCTGTGCGAGGGAA
GAATATTTTTCTCCATTTTGGGGAGTGTTTTTTCCCGTCTTGACGTTTTTGTTTTTGATCTTTTACGTGTGGTGTGCTGG
ATTCATGCAGGAAAGACAGTATCGTGCATCTTCGCTCAGACAGTCCGTCTGTCTTTAA

Upstream 100 bases:

>100_bases
TTCCTTCCCTTGCACTGTGGATTCCAAACGCCGCATTGTTTTTTACTGCATTGATTTTGTCAATGAGAAAATCTGCAGTA
TGAAAATACTGCAGGTGTAT

Downstream 100 bases:

>100_bases
AATAGAGAGATATAGAATGGAACGGAGGGGAAATGGGGTGAAAGGGAGCAGTCTTTTCGTGCACTACTGTAGCGTGCATG
TAGCAATCCTTTTCTTAGGG

Product: hypothetical protein

Products: NA

Alternate protein names: Permease; Permease YjgP/YjgQ

Number of amino acids: Translated: 365; Mature: 365

Protein sequence:

>365_residues
MLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHYVLLCCPLSVLFAATYTVRILYVQNEFL
AIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQSKKDEIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRG
QKVLVDMLVIMKNSNGTIQKLIEAHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKGMSI
QKIKETLHTLKYASKPHRELSIRFYKKFYFPLTMCIMLCLSFLTGSFLKKRSLIMYIFCSVVLASAYYVVEMTSIVCARE
EYFSPFWGVFFPVLTFLFLIFYVWCAGFMQERQYRASSLRQSVCL

Sequences:

>Translated_365_residues
MLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHYVLLCCPLSVLFAATYTVRILYVQNEFL
AIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQSKKDEIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRG
QKVLVDMLVIMKNSNGTIQKLIEAHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKGMSI
QKIKETLHTLKYASKPHRELSIRFYKKFYFPLTMCIMLCLSFLTGSFLKKRSLIMYIFCSVVLASAYYVVEMTSIVCARE
EYFSPFWGVFFPVLTFLFLIFYVWCAGFMQERQYRASSLRQSVCL
>Mature_365_residues
MLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHYVLLCCPLSVLFAATYTVRILYVQNEFL
AIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQSKKDEIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRG
QKVLVDMLVIMKNSNGTIQKLIEAHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKGMSI
QKIKETLHTLKYASKPHRELSIRFYKKFYFPLTMCIMLCLSFLTGSFLKKRSLIMYIFCSVVLASAYYVVEMTSIVCARE
EYFSPFWGVFFPVLTFLFLIFYVWCAGFMQERQYRASSLRQSVCL

Specific function: Unknown

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42123; Mature: 42123

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHYVLLCCPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SVLFAATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQS
HHHHHHHHHEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
KKDEIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMKNSNGTIQK
CCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHH
LIEAHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKGMSI
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCH
QKIKETLHTLKYASKPHRELSIRFYKKFYFPLTMCIMLCLSFLTGSFLKKRSLIMYIFCS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYVWCAGFMQERQYRASSLR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVCL
HHHCC
>Mature Secondary Structure
MLDMFLPIFFLVLVCASMILDAIDILVNLTQFISNGYRFSSLVKIWYVSIPHYVLLCCPL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
SVLFAATYTVRILYVQNEFLAIHFGGLSFFSIVGPWFGFMCFLAIGIFAFDNSVVVVSQS
HHHHHHHHHEEEEEEECCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
KKDEIIARTVSYAQGNSENDVVASSFDGKIISIAGAYHRGQKVLVDMLVIMKNSNGTIQK
CCHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCHHHH
LIEAHTAHWQKDRWVLIKPVVYTITHEMKLMVSEYLDSFELREPLELFDHQDFLTKGMSI
HHHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHHHCCCH
QKIKETLHTLKYASKPHRELSIRFYKKFYFPLTMCIMLCLSFLTGSFLKKRSLIMYIFCS
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVLASAYYVVEMTSIVCAREEYFSPFWGVFFPVLTFLFLIFYVWCAGFMQERQYRASSLR
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSVCL
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA