Definition | Natranaerobius thermophilus JW/NM-WN-LF, complete genome. |
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Accession | NC_010718 |
Length | 3,165,557 |
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The map label for this gene is fusA [H]
Identifier: 188584652
GI number: 188584652
Start: 18000
End: 20078
Strand: Direct
Name: fusA [H]
Synonym: Nther_0010
Alternate gene names: 188584652
Gene position: 18000-20078 (Clockwise)
Preceding gene: 188584651
Following gene: 188584653
Centisome position: 0.57
GC content: 37.42
Gene sequence:
>2079_bases ATGAAGAGTTATCAACCGGATCAAATTAGAAATGTGGGATTATGTTCTCATGGTGGTGCGGGCAAGACATCCTTAACCGA AGCTCTACTGTACTCTTCCAACTCCATTGATCGACTAGGTAATGTAGAAGATGGTACTACTACTACAGATTTTGATAAAG AAGAAGTAGATCGAGGTATTACCATCAATACTTCAGTGGCCCCTTGTGAGTGGAAAGGTCATAAGCTCAATTTAGTGGAT ACCCCGGGATATTTTGACTTCATTGGCGATGTGAAAAGTTCTTTGCGTATCGTAGATGGAGCTTTAATAGTAGTTTGTGC TGCTTCTGGTGTGCAAGTTGGGACAGAACAAGTATGGCATTATGCTGATGAAAATGACCTACCAAGAGTGGTATTTATAA ATAAAATGGAAAGAGAAAATGCCAGCTTTAATAGGACTTTAGAACAATTAAGGGAAAATTTTGGGGATCAAGTTGTTCCC GTTATGATACCAATCGGAAGTGAAGATTCCTTTGAAGGTGTAATTAATTTAGTCACGATGAAAGCTAATTACCATAAAGG AGATGGCAAGGAGTTTAGCGAAGAAGAGATTCCTTCAGAATATCAAGAAGAAGCAGATAATTTTCGGGAAATGCTAATGG AAGCTGTGGCAGAATGTGATGATGAAATGCTAGAAAAATATTTAGAGGGCGAATCTTTAACAGAAGATGAGGTCATCAAT GGAGTGAAACAATTTACAAAAGAAGGAGAACTTATTCCCGTCCTTTGTGGCTCAGCAATTCAGAATATTGGTGTAACTCA GTTGATGGATTGCCTTAAATACTATATTCCTAGTCCGGTTGATTTAAATTATCAAGGTTTTAATCCTGAGACTGAGGAGG AAGTTAAGATAAATCCATCTGAAGAGGGACCCTTCAGTGCATTTGTCTTTAAAACCGTGGCAGACCCCTATGTGGGTAGA CTGAATTATTTCAGAGTATATTCTGGCCAACTTTCTGACGACAAAGAAGCATATAATTCTAATAATAAAACCTCTGAAAG AATTGGTAAGTTGTATTATTTAAAAGGAAAAGAACAAATCCCAGTGAATACTGTTTCTGTTGGAGATATAGCTGCAGTTA GTAAATTACAGAAAACTGCTACAGGGGATACACTATCAGATTCTGAAAAACCAGTTAAGCTACCAGAAGTTGAATTCCCA GATCCGGTCATTTCTTTTGCTGTTGTCACACAAGATAAAGGTGACGAAGAAAAAGTCGGTACAAGTTTGTCTAAATTTTT AGAAGAAGATCCAATTTTAAATTTAGAGAAGAATGACGAAACTAAAGAAACACTAATTTCTGGAATGGGAGAATTGCAGC TTGAAATAATAATTGAGAAAATGAAGAAAAAGTACGGAGTAGATGTAGAGTTGAAAACTCCCAAGGTTCCCTACAAAGAA ACAATTACTAAAACAGTTAATGCTGAAGAAAAATATAAAAAACAATCAGGTGGAAGAGGGCAATATGGCCATGTGTTTAT TGAATTTTCACCCTTACAAGAAGGGGAAGGTTTTCAGTTTGAAAACAATATTGTTGGCGGAGTAATTCCCAAAACATATA TTCCGGCTGTAGAAAAAGGAATATTTGAGGCTATGGAGACAGGAGTTTTGGCAGGATATCCTGTGATTGATATTAAAGCT AACCTATACGATGGTTCTCACCACAGTGTTGATTCTTCTGAAATGGCCTTCAAAGTTGCAGGTGCCAACGCATTCAAAAA AGGAATGCAGAATGCTCAACCAGTACTTTTAGAGCCAGTAATGGAAGTAGAAGTAAGAGTTCCAGAAAAATTCATGGGAG ATATTATGGGTGATATAAATAGTAAACGGGGTAAAATCCAGGGAATGGACCCTGATGGTGATTATCAAATAATAAAAGCT TATGTACCCCAAGCAGAGATGTTAAGGTACGCAATTGACTTGAGATCTATGGCTCAGGGTAGAGGGACATTCACTTCTGT ATTTAGCCATTACGAGCGAGTACCTGATGATGTTAGAGATGAGATCATTGAAGAGACTACTGCAGAGAAGGAAGCATAA
Upstream 100 bases:
>100_bases ACCTCTAGTTGTCAGTATTTTTTACGAAAATTAGTGAAAAAATTATTAAAATTAAATTTTAGAAAAGTTAAATAAAAAGC TACAAAGGAGGAATTTTCAC
Downstream 100 bases:
>100_bases AATAAAACCAATAAATTTTGGAAGTTATTAGCAATCAAATTTGATTTGACCATGTTATCGACTTATATTAAAATTTAATA CAATTGGTAGGGACCGGGTG
Product: translation elongation factor 2 (EF-2/EF-G)
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 692; Mature: 692
Protein sequence:
>692_residues MKSYQPDQIRNVGLCSHGGAGKTSLTEALLYSSNSIDRLGNVEDGTTTTDFDKEEVDRGITINTSVAPCEWKGHKLNLVD TPGYFDFIGDVKSSLRIVDGALIVVCAASGVQVGTEQVWHYADENDLPRVVFINKMERENASFNRTLEQLRENFGDQVVP VMIPIGSEDSFEGVINLVTMKANYHKGDGKEFSEEEIPSEYQEEADNFREMLMEAVAECDDEMLEKYLEGESLTEDEVIN GVKQFTKEGELIPVLCGSAIQNIGVTQLMDCLKYYIPSPVDLNYQGFNPETEEEVKINPSEEGPFSAFVFKTVADPYVGR LNYFRVYSGQLSDDKEAYNSNNKTSERIGKLYYLKGKEQIPVNTVSVGDIAAVSKLQKTATGDTLSDSEKPVKLPEVEFP DPVISFAVVTQDKGDEEKVGTSLSKFLEEDPILNLEKNDETKETLISGMGELQLEIIIEKMKKKYGVDVELKTPKVPYKE TITKTVNAEEKYKKQSGGRGQYGHVFIEFSPLQEGEGFQFENNIVGGVIPKTYIPAVEKGIFEAMETGVLAGYPVIDIKA NLYDGSHHSVDSSEMAFKVAGANAFKKGMQNAQPVLLEPVMEVEVRVPEKFMGDIMGDINSKRGKIQGMDPDGDYQIIKA YVPQAEMLRYAIDLRSMAQGRGTFTSVFSHYERVPDDVRDEIIEETTAEKEA
Sequences:
>Translated_692_residues MKSYQPDQIRNVGLCSHGGAGKTSLTEALLYSSNSIDRLGNVEDGTTTTDFDKEEVDRGITINTSVAPCEWKGHKLNLVD TPGYFDFIGDVKSSLRIVDGALIVVCAASGVQVGTEQVWHYADENDLPRVVFINKMERENASFNRTLEQLRENFGDQVVP VMIPIGSEDSFEGVINLVTMKANYHKGDGKEFSEEEIPSEYQEEADNFREMLMEAVAECDDEMLEKYLEGESLTEDEVIN GVKQFTKEGELIPVLCGSAIQNIGVTQLMDCLKYYIPSPVDLNYQGFNPETEEEVKINPSEEGPFSAFVFKTVADPYVGR LNYFRVYSGQLSDDKEAYNSNNKTSERIGKLYYLKGKEQIPVNTVSVGDIAAVSKLQKTATGDTLSDSEKPVKLPEVEFP DPVISFAVVTQDKGDEEKVGTSLSKFLEEDPILNLEKNDETKETLISGMGELQLEIIIEKMKKKYGVDVELKTPKVPYKE TITKTVNAEEKYKKQSGGRGQYGHVFIEFSPLQEGEGFQFENNIVGGVIPKTYIPAVEKGIFEAMETGVLAGYPVIDIKA NLYDGSHHSVDSSEMAFKVAGANAFKKGMQNAQPVLLEPVMEVEVRVPEKFMGDIMGDINSKRGKIQGMDPDGDYQIIKA YVPQAEMLRYAIDLRSMAQGRGTFTSVFSHYERVPDDVRDEIIEETTAEKEA >Mature_692_residues MKSYQPDQIRNVGLCSHGGAGKTSLTEALLYSSNSIDRLGNVEDGTTTTDFDKEEVDRGITINTSVAPCEWKGHKLNLVD TPGYFDFIGDVKSSLRIVDGALIVVCAASGVQVGTEQVWHYADENDLPRVVFINKMERENASFNRTLEQLRENFGDQVVP VMIPIGSEDSFEGVINLVTMKANYHKGDGKEFSEEEIPSEYQEEADNFREMLMEAVAECDDEMLEKYLEGESLTEDEVIN GVKQFTKEGELIPVLCGSAIQNIGVTQLMDCLKYYIPSPVDLNYQGFNPETEEEVKINPSEEGPFSAFVFKTVADPYVGR LNYFRVYSGQLSDDKEAYNSNNKTSERIGKLYYLKGKEQIPVNTVSVGDIAAVSKLQKTATGDTLSDSEKPVKLPEVEFP DPVISFAVVTQDKGDEEKVGTSLSKFLEEDPILNLEKNDETKETLISGMGELQLEIIIEKMKKKYGVDVELKTPKVPYKE TITKTVNAEEKYKKQSGGRGQYGHVFIEFSPLQEGEGFQFENNIVGGVIPKTYIPAVEKGIFEAMETGVLAGYPVIDIKA NLYDGSHHSVDSSEMAFKVAGANAFKKGMQNAQPVLLEPVMEVEVRVPEKFMGDIMGDINSKRGKIQGMDPDGDYQIIKA YVPQAEMLRYAIDLRSMAQGRGTFTSVFSHYERVPDDVRDEIIEETTAEKEA
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=693, Percent_Identity=35.7864357864358, Blast_Score=430, Evalue=1e-120, Organism=Homo sapiens, GI19923640, Length=712, Percent_Identity=30.7584269662921, Blast_Score=355, Evalue=7e-98, Organism=Homo sapiens, GI25306287, Length=712, Percent_Identity=28.6516853932584, Blast_Score=297, Evalue=2e-80, Organism=Homo sapiens, GI25306283, Length=390, Percent_Identity=35.1282051282051, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI4503483, Length=831, Percent_Identity=23.1046931407942, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI217272892, Length=803, Percent_Identity=23.412204234122, Blast_Score=114, Evalue=3e-25, Organism=Homo sapiens, GI217272894, Length=803, Percent_Identity=23.412204234122, Blast_Score=114, Evalue=4e-25, Organism=Homo sapiens, GI157426893, Length=184, Percent_Identity=31.5217391304348, Blast_Score=84, Evalue=4e-16, Organism=Homo sapiens, GI94966754, Length=134, Percent_Identity=32.8358208955224, Blast_Score=73, Evalue=1e-12, Organism=Escherichia coli, GI1789738, Length=690, Percent_Identity=42.463768115942, Blast_Score=585, Evalue=1e-168, Organism=Escherichia coli, GI1790835, Length=472, Percent_Identity=25.8474576271186, Blast_Score=130, Evalue=2e-31, Organism=Escherichia coli, GI48994988, Length=149, Percent_Identity=34.2281879194631, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788922, Length=152, Percent_Identity=31.5789473684211, Blast_Score=67, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17533571, Length=692, Percent_Identity=32.514450867052, Blast_Score=395, Evalue=1e-110, Organism=Caenorhabditis elegans, GI17556745, Length=719, Percent_Identity=24.7566063977747, Blast_Score=234, Evalue=8e-62, Organism=Caenorhabditis elegans, GI17506493, Length=811, Percent_Identity=23.5511713933416, Blast_Score=149, Evalue=4e-36, Organism=Caenorhabditis elegans, GI17552882, Length=813, Percent_Identity=21.5252152521525, Blast_Score=105, Evalue=1e-22, Organism=Caenorhabditis elegans, GI17557151, Length=156, Percent_Identity=34.6153846153846, Blast_Score=89, Evalue=7e-18, Organism=Saccharomyces cerevisiae, GI6323098, Length=692, Percent_Identity=36.9942196531792, Blast_Score=441, Evalue=1e-124, Organism=Saccharomyces cerevisiae, GI6322359, Length=795, Percent_Identity=27.0440251572327, Blast_Score=287, Evalue=4e-78, Organism=Saccharomyces cerevisiae, GI6324707, Length=802, Percent_Identity=22.069825436409, Blast_Score=131, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6320593, Length=802, Percent_Identity=22.069825436409, Blast_Score=131, Evalue=4e-31, Organism=Saccharomyces cerevisiae, GI6323320, Length=153, Percent_Identity=30.0653594771242, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24582462, Length=691, Percent_Identity=35.1664254703329, Blast_Score=432, Evalue=1e-121, Organism=Drosophila melanogaster, GI221458488, Length=712, Percent_Identity=27.8089887640449, Blast_Score=276, Evalue=3e-74, Organism=Drosophila melanogaster, GI24585711, Length=816, Percent_Identity=23.5294117647059, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24585713, Length=816, Percent_Identity=23.5294117647059, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI24585709, Length=816, Percent_Identity=23.5294117647059, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI21357743, Length=423, Percent_Identity=22.6950354609929, Blast_Score=82, Evalue=1e-15, Organism=Drosophila melanogaster, GI78706572, Length=182, Percent_Identity=31.8681318681319, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 76997; Mature: 76997
Theoretical pI: Translated: 4.32; Mature: 4.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSYQPDQIRNVGLCSHGGAGKTSLTEALLYSSNSIDRLGNVEDGTTTTDFDKEEVDRGI CCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCCC TINTSVAPCEWKGHKLNLVDTPGYFDFIGDVKSSLRIVDGALIVVCAASGVQVGTEQVWH EEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHE YADENDLPRVVFINKMERENASFNRTLEQLRENFGDQVVPVMIPIGSEDSFEGVINLVTM ECCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEE KANYHKGDGKEFSEEEIPSEYQEEADNFREMLMEAVAECDDEMLEKYLEGESLTEDEVIN ECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH GVKQFTKEGELIPVLCGSAIQNIGVTQLMDCLKYYIPSPVDLNYQGFNPETEEEVKINPS HHHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCC EEGPFSAFVFKTVADPYVGRLNYFRVYSGQLSDDKEAYNSNNKTSERIGKLYYLKGKEQI CCCCCHHHHHHHHCCCHHCCCEEEEEECCCCCCCHHHHCCCCCHHHHHCEEEEECCCCCC PVNTVSVGDIAAVSKLQKTATGDTLSDSEKPVKLPEVEFPDPVISFAVVTQDKGDEEKVG CCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCHHHHH TSLSKFLEEDPILNLEKNDETKETLISGMGELQLEIIIEKMKKKYGVDVELKTPKVPYKE HHHHHHHHCCCCEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHH TITKTVNAEEKYKKQSGGRGQYGHVFIEFSPLQEGEGFQFENNIVGGVIPKTYIPAVEKG HHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHH IFEAMETGVLAGYPVIDIKANLYDGSHHSVDSSEMAFKVAGANAFKKGMQNAQPVLLEPV HHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHEEEEECCHHHHHHHCCCCCEECCHH MEVEVRVPEKFMGDIMGDINSKRGKIQGMDPDGDYQIIKAYVPQAEMLRYAIDLRSMAQG HHHEEECCHHHHHHHHHCCCCCCCEEECCCCCCCEEEHEECCCHHHHHHHHHHHHHHHCC RGTFTSVFSHYERVPDDVRDEIIEETTAEKEA CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKSYQPDQIRNVGLCSHGGAGKTSLTEALLYSSNSIDRLGNVEDGTTTTDFDKEEVDRGI CCCCCCCHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCHHHHCCCC TINTSVAPCEWKGHKLNLVDTPGYFDFIGDVKSSLRIVDGALIVVCAASGVQVGTEQVWH EEECCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCHHHHHE YADENDLPRVVFINKMERENASFNRTLEQLRENFGDQVVPVMIPIGSEDSFEGVINLVTM ECCCCCCCEEEEEECHHHCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCEEEEEEE KANYHKGDGKEFSEEEIPSEYQEEADNFREMLMEAVAECDDEMLEKYLEGESLTEDEVIN ECCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHH GVKQFTKEGELIPVLCGSAIQNIGVTQLMDCLKYYIPSPVDLNYQGFNPETEEEVKINPS HHHHHHHCCCEEEEHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCC EEGPFSAFVFKTVADPYVGRLNYFRVYSGQLSDDKEAYNSNNKTSERIGKLYYLKGKEQI CCCCCHHHHHHHHCCCHHCCCEEEEEECCCCCCCHHHHCCCCCHHHHHCEEEEECCCCCC PVNTVSVGDIAAVSKLQKTATGDTLSDSEKPVKLPEVEFPDPVISFAVVTQDKGDEEKVG CCEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHEEEEEEECCCCCHHHHH TSLSKFLEEDPILNLEKNDETKETLISGMGELQLEIIIEKMKKKYGVDVELKTPKVPYKE HHHHHHHHCCCCEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCEEECCCCCCHHH TITKTVNAEEKYKKQSGGRGQYGHVFIEFSPLQEGEGFQFENNIVGGVIPKTYIPAVEKG HHHHHCCCHHHHHHHCCCCCCCCEEEEEEECCCCCCCCEECCCCCCCCCCHHHHHHHHHH IFEAMETGVLAGYPVIDIKANLYDGSHHSVDSSEMAFKVAGANAFKKGMQNAQPVLLEPV HHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCHHHEEEEECCHHHHHHHCCCCCEECCHH MEVEVRVPEKFMGDIMGDINSKRGKIQGMDPDGDYQIIKAYVPQAEMLRYAIDLRSMAQG HHHEEECCHHHHHHHHHCCCCCCCEEECCCCCCCEEEHEECCCHHHHHHHHHHHHHHHCC RGTFTSVFSHYERVPDDVRDEIIEETTAEKEA CCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA