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The map label for this gene is spoVB [H]

Identifier: 188584651

GI number: 188584651

Start: 16215

End: 17795

Strand: Direct

Name: spoVB [H]

Synonym: Nther_0009

Alternate gene names: 188584651

Gene position: 16215-17795 (Clockwise)

Preceding gene: 188584650

Following gene: 188584652

Centisome position: 0.51

GC content: 33.33

Gene sequence:

>1581_bases
ATGGAAAAAGACTCACTGGCTAAGGGGACAATAGTACTAGGCTCTGGAATGGTAATAGCGAAAATATTTGGATTGGTATA
CAGGCTTATATTGCCCAATATAATTGGTACTGAAGCCATGGGGTTATATGGCATGGCTTACGCAGTTTATACGGTTCTAT
TAACACTATCTATGGCCGGAATTCCTGTAGCTATTTCCAAAATAATTAGTAATGAATTATCTCAAGGTCATTATGTGGCG
GCTAATGACACATTTAAAGTTGCTCTATTATTGTTGTTAACTACAGGACTAATATTTACTACGGTATTATATTTTGGCTC
GACTATAATTGCTCATGCAATTACAGGAGATCATAGGGCTGAACTCAGTTTAAAGGCTGTTTCACCAGCAATAATCTTGG
TTTCTGTTATGTCAGCGTTAAGAGGGTATTTTCAAGGACATCTAGTAATGACTTATACTGCTGTGAGTCAGTTATTGGAG
CAGTTTGTCCGTGTCTTTGGGATTCTTTTCTTTGCTTATTTATTAATTCCTTATGGCAAAATCTACTCTGCTGCAGGTGC
AGTTTTTGGAAATGTTGTTGGAGCTTTAACAGGATTGGGATACTTAATCTGGCAATATTTCAATTCCAAGGATATAGTGA
AAAGACAAATTAATAATTCAAGTATTAGTATTTCTAGAATTCAACAAACTGCAATACAAATTATGGTATTGGCTTTTCCA
ATTATAATTGGAAATATGATCATGCCAATTATGAATTTGATAGATGCCAGTTTGGTAGTTAATCGACTTATGGAAATTGG
TTTTACTCAAGGCGAAGCCACTAGTAAATTTGCCTACTTAACACAATATGCTGCACCACTGACCATGTTTCCAGGAACTA
TGGGAATGGCTCTTTCCATGAGCCTAGTACCTGGGATTTCTGAAACAGTAACAAAACAAAATTATGACCAGTTAAAAGGT
CGAGTTAGGTTAGCAATCCGTTTTTCTTTATTAATCGGTTTTCCTTCTTTTTTTGGTTTATTTGTCTTAGCTACCCCAAT
TATATTATTAATTTTTCCAAATGATCCAGAGGCAGCTACTCCCTTACGCTATTTATCACCATCAGTAATTTTTTTACTAT
TAAAATTTGCAACAACAGGAGTTTTACAAGGGTTAAATAAACCCATGATACCTGTTAAAAATTTAATCATAGGTACATTT
TTGAAAGCTATTTTAACTTACTGGTTAACAGCTGTTCCTTATTTAAATGTCAATGGTGCAGCTATAGGAACTTTAATTTC
TTATGCAGTTTCTAGTATGTTTAATCTCTTTTATATCATCAAAATAACAGGGATAAAGATATCTCTGGTACAGGATATTT
TAAAACCAGCAATATTGAGTCTATTTATGGGTATCATAGCCTTTTCAACTCAGATTTTAACTTTAGATTTAATAGGAATA
AGATTGGCAGCATTACTTGCTATAATGGCAGGGGCTTTATTTTATATTTTATTGGGAATCAGCTTCAAAGTAATTAAAAA
AAATGAAATACAATTAATTCCCAAATTAGGCCCTAAAATTTCTCCTTATATTAAAGACTGA

Upstream 100 bases:

>100_bases
ATGAGAAGTAATGATGAGGTGAATTATAATAGTGAAGTTAAAAATTGTGGAAAATACTAAGATAATATTATTTAGAAAAT
AATTGAAAGGATTTACTGTC

Downstream 100 bases:

>100_bases
TTGGTTATTTCCCAGGAAATTAAAATTTATCAGAAAATTATTTAACTTTTTCAGAAGGATTTTAAAATAGACTAAGCGAA
TACATTGAAAGCATGGAATT

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 526; Mature: 526

Protein sequence:

>526_residues
MEKDSLAKGTIVLGSGMVIAKIFGLVYRLILPNIIGTEAMGLYGMAYAVYTVLLTLSMAGIPVAISKIISNELSQGHYVA
ANDTFKVALLLLLTTGLIFTTVLYFGSTIIAHAITGDHRAELSLKAVSPAIILVSVMSALRGYFQGHLVMTYTAVSQLLE
QFVRVFGILFFAYLLIPYGKIYSAAGAVFGNVVGALTGLGYLIWQYFNSKDIVKRQINNSSISISRIQQTAIQIMVLAFP
IIIGNMIMPIMNLIDASLVVNRLMEIGFTQGEATSKFAYLTQYAAPLTMFPGTMGMALSMSLVPGISETVTKQNYDQLKG
RVRLAIRFSLLIGFPSFFGLFVLATPIILLIFPNDPEAATPLRYLSPSVIFLLLKFATTGVLQGLNKPMIPVKNLIIGTF
LKAILTYWLTAVPYLNVNGAAIGTLISYAVSSMFNLFYIIKITGIKISLVQDILKPAILSLFMGIIAFSTQILTLDLIGI
RLAALLAIMAGALFYILLGISFKVIKKNEIQLIPKLGPKISPYIKD

Sequences:

>Translated_526_residues
MEKDSLAKGTIVLGSGMVIAKIFGLVYRLILPNIIGTEAMGLYGMAYAVYTVLLTLSMAGIPVAISKIISNELSQGHYVA
ANDTFKVALLLLLTTGLIFTTVLYFGSTIIAHAITGDHRAELSLKAVSPAIILVSVMSALRGYFQGHLVMTYTAVSQLLE
QFVRVFGILFFAYLLIPYGKIYSAAGAVFGNVVGALTGLGYLIWQYFNSKDIVKRQINNSSISISRIQQTAIQIMVLAFP
IIIGNMIMPIMNLIDASLVVNRLMEIGFTQGEATSKFAYLTQYAAPLTMFPGTMGMALSMSLVPGISETVTKQNYDQLKG
RVRLAIRFSLLIGFPSFFGLFVLATPIILLIFPNDPEAATPLRYLSPSVIFLLLKFATTGVLQGLNKPMIPVKNLIIGTF
LKAILTYWLTAVPYLNVNGAAIGTLISYAVSSMFNLFYIIKITGIKISLVQDILKPAILSLFMGIIAFSTQILTLDLIGI
RLAALLAIMAGALFYILLGISFKVIKKNEIQLIPKLGPKISPYIKD
>Mature_526_residues
MEKDSLAKGTIVLGSGMVIAKIFGLVYRLILPNIIGTEAMGLYGMAYAVYTVLLTLSMAGIPVAISKIISNELSQGHYVA
ANDTFKVALLLLLTTGLIFTTVLYFGSTIIAHAITGDHRAELSLKAVSPAIILVSVMSALRGYFQGHLVMTYTAVSQLLE
QFVRVFGILFFAYLLIPYGKIYSAAGAVFGNVVGALTGLGYLIWQYFNSKDIVKRQINNSSISISRIQQTAIQIMVLAFP
IIIGNMIMPIMNLIDASLVVNRLMEIGFTQGEATSKFAYLTQYAAPLTMFPGTMGMALSMSLVPGISETVTKQNYDQLKG
RVRLAIRFSLLIGFPSFFGLFVLATPIILLIFPNDPEAATPLRYLSPSVIFLLLKFATTGVLQGLNKPMIPVKNLIIGTF
LKAILTYWLTAVPYLNVNGAAIGTLISYAVSSMFNLFYIIKITGIKISLVQDILKPAILSLFMGIIAFSTQILTLDLIGI
RLAALLAIMAGALFYILLGISFKVIKKNEIQLIPKLGPKISPYIKD

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 57224; Mature: 57224

Theoretical pI: Translated: 10.12; Mature: 10.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKDSLAKGTIVLGSGMVIAKIFGLVYRLILPNIIGTEAMGLYGMAYAVYTVLLTLSMAG
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHHHHHHCC
IPVAISKIISNELSQGHYVAANDTFKVALLLLLTTGLIFTTVLYFGSTIIAHAITGDHRA
CHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELSLKAVSPAIILVSVMSALRGYFQGHLVMTYTAVSQLLEQFVRVFGILFFAYLLIPYGK
CEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IYSAAGAVFGNVVGALTGLGYLIWQYFNSKDIVKRQINNSSISISRIQQTAIQIMVLAFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IIIGNMIMPIMNLIDASLVVNRLMEIGFTQGEATSKFAYLTQYAAPLTMFPGTMGMALSM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHH
SLVPGISETVTKQNYDQLKGRVRLAIRFSLLIGFPSFFGLFVLATPIILLIFPNDPEAAT
HHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCC
PLRYLSPSVIFLLLKFATTGVLQGLNKPMIPVKNLIIGTFLKAILTYWLTAVPYLNVNGA
CHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AIGTLISYAVSSMFNLFYIIKITGIKISLVQDILKPAILSLFMGIIAFSTQILTLDLIGI
HHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAALLAIMAGALFYILLGISFKVIKKNEIQLIPKLGPKISPYIKD
HHHHHHHHHHHHHHHHHHHCHHEEEECCCEEECCCCCCCCCCCCCC
>Mature Secondary Structure
MEKDSLAKGTIVLGSGMVIAKIFGLVYRLILPNIIGTEAMGLYGMAYAVYTVLLTLSMAG
CCCCCCCCCEEEEECCHHHHHHHHHHHHHHHCHHHCHHHHHHHHHHHHHHHHHHHHHHCC
IPVAISKIISNELSQGHYVAANDTFKVALLLLLTTGLIFTTVLYFGSTIIAHAITGDHRA
CHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
ELSLKAVSPAIILVSVMSALRGYFQGHLVMTYTAVSQLLEQFVRVFGILFFAYLLIPYGK
CEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
IYSAAGAVFGNVVGALTGLGYLIWQYFNSKDIVKRQINNSSISISRIQQTAIQIMVLAFP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IIIGNMIMPIMNLIDASLVVNRLMEIGFTQGEATSKFAYLTQYAAPLTMFPGTMGMALSM
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHCCCCCHHHHHHH
SLVPGISETVTKQNYDQLKGRVRLAIRFSLLIGFPSFFGLFVLATPIILLIFPNDPEAAT
HHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEECCCCCCCC
PLRYLSPSVIFLLLKFATTGVLQGLNKPMIPVKNLIIGTFLKAILTYWLTAVPYLNVNGA
CHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
AIGTLISYAVSSMFNLFYIIKITGIKISLVQDILKPAILSLFMGIIAFSTQILTLDLIGI
HHHHHHHHHHHHHHHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLAALLAIMAGALFYILLGISFKVIKKNEIQLIPKLGPKISPYIKD
HHHHHHHHHHHHHHHHHHHCHHEEEECCCEEECCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]