Definition Clostridium botulinum B str. Eklund 17B, complete genome.
Accession NC_010674
Length 3,800,327

Click here to switch to the map view.

The map label for this gene is resE [H]

Identifier: 187933777

GI number: 187933777

Start: 2749525

End: 2750733

Strand: Reverse

Name: resE [H]

Synonym: CLL_A2639

Alternate gene names: 187933777

Gene position: 2750733-2749525 (Counterclockwise)

Preceding gene: 187934660

Following gene: 187933059

Centisome position: 72.38

GC content: 22.66

Gene sequence:

>1209_bases
ATGAGAAATCCGTATAAGGAATTAGCAGAATCATTAAATAAAAAAAATAAAATATTAGATGAATTATCAGAAGATATATT
TATAAAAAATAAAGAGTTAGAAACATCTATATTAAATTTAAAGAATAAAGAATATTTATATGAAACATTTTTTAGATTTA
TGCCTCATCCAATAATATTGATTAGTTTAGAAAACAATAGAATATTATTTGCAAATAAAGCTTTTTTAAATTTAGTTGAT
GTAAAAAATGTTAGAGATGTAATAAATAAAAAAATAAACAAGTATATACATTTTGTTACATCTAGCAATGATACAGATCT
TATTTTCAATGCTATTTTAAGTTCTAAAACTGAGGAAAGATTTGTTAATGCTAAATTTTTATCAATGTATAAAGATAAAA
TGGAAGATTTAATTTTAATAGAAGATAACACATCTAAAGTATTGACAGAAGAGATAAAAAAAGAAGTTGAGAGTAGAATG
GTTGAAGAAAGAATAAGAACTGAATTTTTATCTAGTATAAGTCATGATTTAAAGACGCCTATAAATGTTATATATTCATC
TATACAAGTTCAACGAATATATACTAATAAAAATGATATCAAATCATTAGAAAAATATAATTCTATATCTAAAATGAATT
GTATCTCACTTATTAAGTTAACTAATAACTTAATTGATATGTCAAAAATAAATTCGAATTTTTTAATGCCAAATTTAGAA
ATGATTAATGTTGTTGAAACAACAGAAGATATAGTTACATCTCTTGTAGATTATGCACAAAGTAATAGTATAGAAATAAT
ATTTAATACTAACACTGAAGAAAGCTATTTAAATTTAGATTATGAATTTTTACAAAGAATAATTTTAAATTTAATATCTA
ATTCAATAAAGTTTACTCCGATCGATGGAAAGATAATAATAGATATATTAGATGAAGAAGAAAGTGTAAAAATAAGCATA
ATGGATAATGGAGCAGGAATGAATGAAGAGTTTATAAAAGAAGCTTTCTGTAAGTATTCAATGGATAAATATTCAAAAAA
ATCTAAAAAGGGGACAGGCATAGGATTATTTGTTGTTAAAAAATTAGTTGAACTACAGTCAGGGAAGATTGAAATAAAAA
GTAAACTTGGCGAGGGAACAAAGATAACAATAATATTTCCGAAGGAGAATTTAGATGAGGAAGATGCAACAAGATTTAAA
TCTAAGTAG

Upstream 100 bases:

>100_bases
TTTATTTATGTATCCATTAAATGGAATTTTACTTAGATTTAGAGAAATACTACTTTTAAGTGTATTTAATATATTTTTTA
GTATGTTTTTTAAAAACTTT

Downstream 100 bases:

>100_bases
TTTAAAATTAGATACAAAAATTAAATTTTTATCTATTGAGTTTATAATGTACTTAATTTATAATTTGTATTTCTATCTTA
GTAAACAATACAAATTATAT

Product: sensor histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 402; Mature: 402

Protein sequence:

>402_residues
MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIILISLENNRILFANKAFLNLVD
VKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEERFVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRM
VEERIRTEFLSSISHDLKTPINVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE
MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTPIDGKIIIDILDEEESVKISI
MDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVKKLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFK
SK

Sequences:

>Translated_402_residues
MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIILISLENNRILFANKAFLNLVD
VKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEERFVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRM
VEERIRTEFLSSISHDLKTPINVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE
MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTPIDGKIIIDILDEEESVKISI
MDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVKKLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFK
SK
>Mature_402_residues
MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIILISLENNRILFANKAFLNLVD
VKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEERFVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRM
VEERIRTEFLSSISHDLKTPINVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE
MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTPIDGKIIIDILDEEESVKISI
MDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVKKLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFK
SK

Specific function: Member of the two-component regulatory system resD/resE involved in the global regulation of aerobic and anaerobic respiration. Probably phosphorylates resD [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1788713, Length=275, Percent_Identity=25.8181818181818, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1786912, Length=267, Percent_Identity=24.3445692883895, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI48994928, Length=240, Percent_Identity=27.9166666666667, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1788549, Length=239, Percent_Identity=25.1046025104602, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789149, Length=233, Percent_Identity=28.755364806867, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI145693157, Length=274, Percent_Identity=25.1824817518248, Blast_Score=79, Evalue=5e-16,
Organism=Escherichia coli, GI1786783, Length=225, Percent_Identity=21.7777777777778, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1786600, Length=234, Percent_Identity=24.7863247863248, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1790436, Length=129, Percent_Identity=31.0077519379845, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1788393, Length=229, Percent_Identity=20.9606986899563, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788279, Length=214, Percent_Identity=28.5046728971963, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR000014
- InterPro:   IPR013767
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA; PF00989 PAS [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 46607; Mature: 46607

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIIL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCEEE
ISLENNRILFANKAFLNLVDVKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEER
EEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCHHHH
FVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRMVEERIRTEFLSSISHDLKTP
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
INVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE
HHHHHHHHEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTP
HEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHEECCHHHHHHHHHHHHCCCCEEEE
IDGKIIIDILDEEESVKISIMDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVK
CCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFKSK
HHHHHCCCCEEEEHHCCCCCEEEEEECCCCCCHHHHHHCCCC
>Mature Secondary Structure
MRNPYKELAESLNKKNKILDELSEDIFIKNKELETSILNLKNKEYLYETFFRFMPHPIIL
CCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHCCCHHHHHHHHHHHCCCCEEE
ISLENNRILFANKAFLNLVDVKNVRDVINKKINKYIHFVTSSNDTDLIFNAILSSKTEER
EEECCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHCCCHHHH
FVNAKFLSMYKDKMEDLILIEDNTSKVLTEEIKKEVESRMVEERIRTEFLSSISHDLKTP
HHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
INVIYSSIQVQRIYTNKNDIKSLEKYNSISKMNCISLIKLTNNLIDMSKINSNFLMPNLE
HHHHHHHHEEEEEECCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHH
MINVVETTEDIVTSLVDYAQSNSIEIIFNTNTEESYLNLDYEFLQRIILNLISNSIKFTP
HEEHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHEECCHHHHHHHHHHHHCCCCEEEE
IDGKIIIDILDEEESVKISIMDNGAGMNEEFIKEAFCKYSMDKYSKKSKKGTGIGLFVVK
CCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
KLVELQSGKIEIKSKLGEGTKITIIFPKENLDEEDATRFKSK
HHHHHCCCCEEEEHHCCCCCEEEEEECCCCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934829; 9384377; 8631715 [H]