Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is mlhB [H]
Identifier: 187927418
GI number: 187927418
Start: 331364
End: 332335
Strand: Direct
Name: mlhB [H]
Synonym: Rpic_0315
Alternate gene names: 187927418
Gene position: 331364-332335 (Clockwise)
Preceding gene: 187927415
Following gene: 187927419
Centisome position: 8.4
GC content: 66.26
Gene sequence:
>972_bases ATGAGCTGGCAGAACTGGGTCGTCTCTAGGATGGTGCGCAACCAGATCAAGAAGCCGACCGAGCGGGAGCCCTTCGACCC GATCGCCACACGCCTGCATGCCGAGAAGCGCAAGATGCCTTCGCCGGTGGAGCTGCCGCCGGATTGGCGTATCGTCCCGG CCGATGGTGTCAACGGCGATGGCCTCACCGGCGAATGGATTGAACCCGCCGATCCGGACCTGCATGACGACGCGCCGGTC GTGCTTTATCTGCATGGCGGCGGCTATTTCTTCTGCAGCCCGCGCACACATCGCCCGATCACCATTGGCCTCGCCACGCA TGCCCGGGCGCGGGTGTGCGTGCCGGACTACCGGTTGGCACCCGAGCATCCGTTTCCTGCGCCGGTGGAAGATGCGCTCT TCACGTATCGCACGCTGGTGACGCAGGGCGTGTCGCCCTCGCGCATTGTGGTGGCCGGCGATTCCGCGGGCGGCGGGCTG GCGTTGGCGCTGCTGGTGGCCTTGCGTGATGCGGCAGACCCGCTGCCGGCGGGCGCGGTGCTGTATTCGCCGTGGACGGA TCTTGCCGCCACCGGCCAGAGCCTGATCGACAACGATGAATCCGACGTGATGTTTCGCGGCGCGTGGATGGCGCATGGTG CGGCGTTGTACCTGGGCGATTCGGGCGCACCGGCCGACCATCCGCTCGCCTCGCCGCTGTATGCCGATTTCACGGGCCTG CCCACACTGCACTGCTATGTCAGCACCAGCGAAGTGCTGCGCGACGATACCCTCCGAATGGCCGAGCGGGCGCGGGCGGC CGGGGTATCCGTATCGGTAGAAATGGGGCGGCGGCTTCCTCACGTGTGGCCGATCTTCTATCCTTTCCTTCCAGAGGCGC GCGTAGCGCTCAAACGATCGGGCGAGCAGATCAGGCGACTGGTTGCCGCCCAGCACAAGAACCGAGAACCGGTGGAACTG ACACCGGCCTGA
Upstream 100 bases:
>100_bases GTTGCCCGATGGGGACACTCGCCGTTCAAACAGGGTGCGAACCGATTGTCTGGGTAGCGCTTCCTCGCTAGGCTGGGACT TTGCAGCGGAGGGTTGCGCG
Downstream 100 bases:
>100_bases CCCAGCCGGCGGCGCCCCTGCGTAGCCCGGTCGGGATGCGCAAACGGGGAGCCCAGCATGCGTCGGGTGGTGGTATTGGG TGTGGTGCTGGCCGTGGTGG
Product: alpha/beta hydrolase fold-3 domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 323; Mature: 322
Protein sequence:
>323_residues MSWQNWVVSRMVRNQIKKPTEREPFDPIATRLHAEKRKMPSPVELPPDWRIVPADGVNGDGLTGEWIEPADPDLHDDAPV VLYLHGGGYFFCSPRTHRPITIGLATHARARVCVPDYRLAPEHPFPAPVEDALFTYRTLVTQGVSPSRIVVAGDSAGGGL ALALLVALRDAADPLPAGAVLYSPWTDLAATGQSLIDNDESDVMFRGAWMAHGAALYLGDSGAPADHPLASPLYADFTGL PTLHCYVSTSEVLRDDTLRMAERARAAGVSVSVEMGRRLPHVWPIFYPFLPEARVALKRSGEQIRRLVAAQHKNREPVEL TPA
Sequences:
>Translated_323_residues MSWQNWVVSRMVRNQIKKPTEREPFDPIATRLHAEKRKMPSPVELPPDWRIVPADGVNGDGLTGEWIEPADPDLHDDAPV VLYLHGGGYFFCSPRTHRPITIGLATHARARVCVPDYRLAPEHPFPAPVEDALFTYRTLVTQGVSPSRIVVAGDSAGGGL ALALLVALRDAADPLPAGAVLYSPWTDLAATGQSLIDNDESDVMFRGAWMAHGAALYLGDSGAPADHPLASPLYADFTGL PTLHCYVSTSEVLRDDTLRMAERARAAGVSVSVEMGRRLPHVWPIFYPFLPEARVALKRSGEQIRRLVAAQHKNREPVEL TPA >Mature_322_residues SWQNWVVSRMVRNQIKKPTEREPFDPIATRLHAEKRKMPSPVELPPDWRIVPADGVNGDGLTGEWIEPADPDLHDDAPVV LYLHGGGYFFCSPRTHRPITIGLATHARARVCVPDYRLAPEHPFPAPVEDALFTYRTLVTQGVSPSRIVVAGDSAGGGLA LALLVALRDAADPLPAGAVLYSPWTDLAATGQSLIDNDESDVMFRGAWMAHGAALYLGDSGAPADHPLASPLYADFTGLP TLHCYVSTSEVLRDDTLRMAERARAAGVSVSVEMGRRLPHVWPIFYPFLPEARVALKRSGEQIRRLVAAQHKNREPVELT PA
Specific function: Lactone hydrolase that is required for the degradation of monocyclic monoterpenes such as menthol and carvone. Catalyzes the ring opening of lactones formed during degradation of monocyclic monoterpenes. Can hydrolyze epsilon-caprolactone, the lactone der
COG id: COG0657
COG function: function code I; Esterase/lipase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the 'GDXG' lipolytic enzyme family [H]
Homologues:
Organism=Homo sapiens, GI206597554, Length=101, Percent_Identity=41.5841584158416, Blast_Score=68, Evalue=1e-11, Organism=Homo sapiens, GI157041239, Length=99, Percent_Identity=38.3838383838384, Blast_Score=66, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115533410, Length=112, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI115533412, Length=112, Percent_Identity=35.7142857142857, Blast_Score=67, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013094 [H]
Pfam domain/function: PF07859 Abhydrolase_3 [H]
EC number: =3.1.1.83 [H]
Molecular weight: Translated: 35338; Mature: 35206
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: PS01173 LIPASE_GDXG_HIS ; PS01174 LIPASE_GDXG_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWQNWVVSRMVRNQIKKPTEREPFDPIATRLHAEKRKMPSPVELPPDWRIVPADGVNGD CCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC GLTGEWIEPADPDLHDDAPVVLYLHGGGYFFCSPRTHRPITIGLATHARARVCVPDYRLA CCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEEEECCCCEEEECCCCCCC PEHPFPAPVEDALFTYRTLVTQGVSPSRIVVAGDSAGGGLALALLVALRDAADPLPAGAV CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEE LYSPWTDLAATGQSLIDNDESDVMFRGAWMAHGAALYLGDSGAPADHPLASPLYADFTGL EECCCHHHHHCCHHHHCCCCCCEEEEEEHHHCCEEEEECCCCCCCCCCCCCCHHHCCCCC PTLHCYVSTSEVLRDDTLRMAERARAAGVSVSVEMGRRLPHVWPIFYPFLPEARVALKRS CEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHHHHHCCCCHHHHHHHHC GEQIRRLVAAQHKNREPVELTPA HHHHHHHHHHHHCCCCCEEECCC >Mature Secondary Structure SWQNWVVSRMVRNQIKKPTEREPFDPIATRLHAEKRKMPSPVELPPDWRIVPADGVNGD CHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCC GLTGEWIEPADPDLHDDAPVVLYLHGGGYFFCSPRTHRPITIGLATHARARVCVPDYRLA CCCCCCCCCCCCCCCCCCCEEEEEECCEEEEECCCCCCCEEEEEECCCCEEEECCCCCCC PEHPFPAPVEDALFTYRTLVTQGVSPSRIVVAGDSAGGGLALALLVALRDAADPLPAGAV CCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEE LYSPWTDLAATGQSLIDNDESDVMFRGAWMAHGAALYLGDSGAPADHPLASPLYADFTGL EECCCHHHHHCCHHHHCCCCCCEEEEEEHHHCCEEEEECCCCCCCCCCCCCCHHHCCCCC PTLHCYVSTSEVLRDDTLRMAERARAAGVSVSVEMGRRLPHVWPIFYPFLPEARVALKRS CEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEHHHHCCCCCHHHHHHCCCCHHHHHHHHC GEQIRRLVAAQHKNREPVELTPA HHHHHHHHHHHHCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA