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The map label for this gene is ycdQ [C]

Identifier: 187927415

GI number: 187927415

Start: 328838

End: 329608

Strand: Direct

Name: ycdQ [C]

Synonym: Rpic_0311

Alternate gene names: 187927415

Gene position: 328838-329608 (Clockwise)

Preceding gene: 187927414

Following gene: 187927418

Centisome position: 8.34

GC content: 66.54

Gene sequence:

>771_bases
ATGCCGATGACCGGCGCTTCCACTTCGCACCTCGTTCTGATTCCAAGCTACAACCCTGGCCACAAGGTTGACGACACCGT
GCGCAGTGCGCGCGCACAGTGGAACCCGGTCTGGGTGGTGGTGGACGGCAGTACCGACGGCAGCACCGAACGCTTGCAGG
CCATGGCCGCGCAAGACCCGGGGCTGCGGGTGATCGTGCTGCCGCGCAATCGCGGCAAGGGCGTGGCTGTATTGGCTGGT
CTGGAGGCCGCTGCGGCAGCAGGCTTTACCTACGTGCTGACCATGGACGCCGATGGGCAGCATCCCGCCAACCTGATCCC
CGAATTCATGGCTGCCTCGCAGGCGGCCCCCGACGCGATGATCCTCGGCCAGCCGGTGTTCGACGCAACGGCGCCGCAGA
TGCGTGTGCAGGGCCGGCGCCTGTCCAATGGCTGCGCGGACATCGAGACCCTGTGGGCTGGAATTGGCGATACGCTGTTC
GGCTTTCGCGTTTATCCAATTGCACCGCTGGCCGAGATCATGCGCCAGCAGAGCTGGATGCGCGGTTTCGATTTCGACCC
GGAAGCGGCAGTGCGCCTGTGCTGGGCCGGCGTGCGTCCGATCCGGCTGGCGGCGCCGGTGCGCTACTTCCGCCCGAACG
AGGGCGGCGTGTCGCATTTCCGGTATCTGCGTGACAACATCCTGCTGATCGCAATGCATCTGCGCCTGGCGGCTGAGGGC
TTGCTGCGCTTGCCCTCGATGATCGCGCGGCGCCTGCAGCGCGGCTGGTAG

Upstream 100 bases:

>100_bases
GCTGGGCTCGCTCGCGGCCTACGTGGCAGAGCACCGCACGCGATAGGCTCGCGCCAGCGCCCGACGCATTCCGCTTTCAA
CGTTTGGCCGGACCGACGCC

Downstream 100 bases:

>100_bases
TCCGCGGCAGGCGGGTTCACACCGCTTCCGTGGCGGCCCTGGCCTGGTGCAGCAGGGTTTCTGCGGCGTGCCAGGCCTGT
GACGCGGCAGACGGATCGCC

Product: family 2 glycosyl transferase

Products: NA

Alternate protein names: Glycosyl Transferase Group 2 Family Protein; Glycosyl Transferase; Glycosyltransferase; Acyltransferase; Glycosyl Transferase Group 2 Family; Dolichyl-Phosphate Mannose Synthase; Family 2 Glycosyl Transferase; Glycosyl Transferase Family 2 And Acyltransferase Domains; Dolichol-Phosphate Mannosyltransferase; Bacterial Lipid A Biosynthesis Acyltransferase Family; Transmembrane Family-2 Glycosyl Transferase; B-Glycosyltransferase; Cell Wall Biogenesis Glycosyltransferase; B-Glycosyltransferase Glycosyltransferase Family 2 Protein; Bifunctional Glycosyl Transferase/Acyl Transferase; Glycosyltransferase Involved In Cell Wall Biogenesis; Glycosyl Transferase Gt2J; Dolichyl-Phosphate Mannose Synthase-Like Protein; Glycosyl Transferase Domain-Containing Protein

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPMTGASTSHLVLIPSYNPGHKVDDTVRSARAQWNPVWVVVDGSTDGSTERLQAMAAQDPGLRVIVLPRNRGKGVAVLAG
LEAAAAAGFTYVLTMDADGQHPANLIPEFMAASQAAPDAMILGQPVFDATAPQMRVQGRRLSNGCADIETLWAGIGDTLF
GFRVYPIAPLAEIMRQQSWMRGFDFDPEAAVRLCWAGVRPIRLAAPVRYFRPNEGGVSHFRYLRDNILLIAMHLRLAAEG
LLRLPSMIARRLQRGW

Sequences:

>Translated_256_residues
MPMTGASTSHLVLIPSYNPGHKVDDTVRSARAQWNPVWVVVDGSTDGSTERLQAMAAQDPGLRVIVLPRNRGKGVAVLAG
LEAAAAAGFTYVLTMDADGQHPANLIPEFMAASQAAPDAMILGQPVFDATAPQMRVQGRRLSNGCADIETLWAGIGDTLF
GFRVYPIAPLAEIMRQQSWMRGFDFDPEAAVRLCWAGVRPIRLAAPVRYFRPNEGGVSHFRYLRDNILLIAMHLRLAAEG
LLRLPSMIARRLQRGW
>Mature_255_residues
PMTGASTSHLVLIPSYNPGHKVDDTVRSARAQWNPVWVVVDGSTDGSTERLQAMAAQDPGLRVIVLPRNRGKGVAVLAGL
EAAAAAGFTYVLTMDADGQHPANLIPEFMAASQAAPDAMILGQPVFDATAPQMRVQGRRLSNGCADIETLWAGIGDTLFG
FRVYPIAPLAEIMRQQSWMRGFDFDPEAAVRLCWAGVRPIRLAAPVRYFRPNEGGVSHFRYLRDNILLIAMHLRLAAEGL
LRLPSMIARRLQRGW

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27999; Mature: 27868

Theoretical pI: Translated: 9.56; Mature: 9.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPMTGASTSHLVLIPSYNPGHKVDDTVRSARAQWNPVWVVVDGSTDGSTERLQAMAAQDP
CCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCC
GLRVIVLPRNRGKGVAVLAGLEAAAAAGFTYVLTMDADGQHPANLIPEFMAASQAAPDAM
CCEEEEEECCCCCCEEEEECCHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
ILGQPVFDATAPQMRVQGRRLSNGCADIETLWAGIGDTLFGFRVYPIAPLAEIMRQQSWM
EECCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHCCCHHHCEEECCCHHHHHHHHHHHHH
RGFDFDPEAAVRLCWAGVRPIRLAAPVRYFRPNEGGVSHFRYLRDNILLIAMHLRLAAEG
CCCCCCHHHHHHHHHCCCCCEEEECCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
LLRLPSMIARRLQRGW
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PMTGASTSHLVLIPSYNPGHKVDDTVRSARAQWNPVWVVVDGSTDGSTERLQAMAAQDP
CCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCCC
GLRVIVLPRNRGKGVAVLAGLEAAAAAGFTYVLTMDADGQHPANLIPEFMAASQAAPDAM
CCEEEEEECCCCCCEEEEECCHHHHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCEE
ILGQPVFDATAPQMRVQGRRLSNGCADIETLWAGIGDTLFGFRVYPIAPLAEIMRQQSWM
EECCCCCCCCCCHHHHCCCHHCCCHHHHHHHHHHCCCHHHCEEECCCHHHHHHHHHHHHH
RGFDFDPEAAVRLCWAGVRPIRLAAPVRYFRPNEGGVSHFRYLRDNILLIAMHLRLAAEG
CCCCCCHHHHHHHHHCCCCCEEEECCEEEECCCCCCHHHHHHHHHCHHHHHHHHHHHHHH
LLRLPSMIARRLQRGW
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA