Definition | Ralstonia pickettii 12J chromosome chromosome 1, complete sequence. |
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Accession | NC_010682 |
Length | 3,942,557 |
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The map label for this gene is 187927419
Identifier: 187927419
GI number: 187927419
Start: 332393
End: 333187
Strand: Direct
Name: 187927419
Synonym: Rpic_0316
Alternate gene names: NA
Gene position: 332393-333187 (Clockwise)
Preceding gene: 187927418
Following gene: 187927421
Centisome position: 8.43
GC content: 65.03
Gene sequence:
>795_bases ATGCGTCGGGTGGTGGTATTGGGTGTGGTGCTGGCCGTGGTGGCCGGCGCCTGGCATTGGAGTCGGCTGCATCGGCTGAG GCTGGCCGATGTGCGCTTCGCGCCGATCGAAAACGTCGCGGCCGCGACTGGCTCGGCAGGCGCCCCCGTACTCAATGCCA ACAAGTCGCACTGGCTCAAGGCCTGCGATCAGGCGCTCGGGCCGATGCGCGTGGAGGTGCGTGCCACCGAAACGCCGCTG TCCTTCTCCAACGACCGTTCGGTCGATCAACTCACTGCCGAGGCGCCGCCGTATGACCGATCAGCCCGCGTACTGGGCAA AACGTACGCGACGCTGGTCGCACGCTTCGACGTCAACAGCCGCTACATGGCCATCGCCACGCAGCCGCCAACGACCTGCC TGCGGCCTTCCATCTCGGTGGAGTTGGTGCTGAATAATTTTCGGGTGACGGTGGCGCGTGAATTTGCGCCGGGCACTTGC GCCTACAACGCCATCCGCGAGCATGAGTTGCGGCATGTGGCCGTCAACCGAGCGGTGCTGCCGCACGCCGCCGAGGTGAT CCGCAAGGAAATCGAGAGCGAATACGGCGGCCGGCTTTATTTTGGCGATCCGGACCGCATTGCGGCTGATTTGCAAGCAG CGCTCACGCGCCATTGGCTGCCGCGTGCGCAATCGCTGATCGAACTGGGCTTGCAGGCGCACGAGCAGATCGATACGGCG CGTGAGCGGGAGCGTATGAGCCGCGTGTGCAATGGCGAGGTGCAGGCCGTGTTGCAGCAACTCACGCGCAGCTAG
Upstream 100 bases:
>100_bases CCAGCACAAGAACCGAGAACCGGTGGAACTGACACCGGCCTGACCCAGCCGGCGGCGCCCCTGCGTAGCCCGGTCGGGAT GCGCAAACGGGGAGCCCAGC
Downstream 100 bases:
>100_bases CGCGTGGACGCGTGCGAGTTCAGGCGGCCGGACGGTGCGCGGCGCGTGCCTGCAGTTGGGCGACAGCCTCGTCGACGATA GCTTCGGGCGGCAGCGCGAT
Product: putative signal peptide protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MRRVVVLGVVLAVVAGAWHWSRLHRLRLADVRFAPIENVAAATGSAGAPVLNANKSHWLKACDQALGPMRVEVRATETPL SFSNDRSVDQLTAEAPPYDRSARVLGKTYATLVARFDVNSRYMAIATQPPTTCLRPSISVELVLNNFRVTVAREFAPGTC AYNAIREHELRHVAVNRAVLPHAAEVIRKEIESEYGGRLYFGDPDRIAADLQAALTRHWLPRAQSLIELGLQAHEQIDTA RERERMSRVCNGEVQAVLQQLTRS
Sequences:
>Translated_264_residues MRRVVVLGVVLAVVAGAWHWSRLHRLRLADVRFAPIENVAAATGSAGAPVLNANKSHWLKACDQALGPMRVEVRATETPL SFSNDRSVDQLTAEAPPYDRSARVLGKTYATLVARFDVNSRYMAIATQPPTTCLRPSISVELVLNNFRVTVAREFAPGTC AYNAIREHELRHVAVNRAVLPHAAEVIRKEIESEYGGRLYFGDPDRIAADLQAALTRHWLPRAQSLIELGLQAHEQIDTA RERERMSRVCNGEVQAVLQQLTRS >Mature_264_residues MRRVVVLGVVLAVVAGAWHWSRLHRLRLADVRFAPIENVAAATGSAGAPVLNANKSHWLKACDQALGPMRVEVRATETPL SFSNDRSVDQLTAEAPPYDRSARVLGKTYATLVARFDVNSRYMAIATQPPTTCLRPSISVELVLNNFRVTVAREFAPGTC AYNAIREHELRHVAVNRAVLPHAAEVIRKEIESEYGGRLYFGDPDRIAADLQAALTRHWLPRAQSLIELGLQAHEQIDTA RERERMSRVCNGEVQAVLQQLTRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29319; Mature: 29319
Theoretical pI: Translated: 9.52; Mature: 9.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRVVVLGVVLAVVAGAWHWSRLHRLRLADVRFAPIENVAAATGSAGAPVLNANKSHWLK CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCHHHHHHCCCCCCCCEECCCHHHHHH ACDQALGPMRVEVRATETPLSFSNDRSVDQLTAEAPPYDRSARVLGKTYATLVARFDVNS HHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC RYMAIATQPPTTCLRPSISVELVLNNFRVTVAREFAPGTCAYNAIREHELRHVAVNRAVL CEEEEECCCCCHHHCCCCEEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH PHAAEVIRKEIESEYGGRLYFGDPDRIAADLQAALTRHWLPRAQSLIELGLQAHEQIDTA HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RERERMSRVCNGEVQAVLQQLTRS HHHHHHHHHHCHHHHHHHHHHHCC >Mature Secondary Structure MRRVVVLGVVLAVVAGAWHWSRLHRLRLADVRFAPIENVAAATGSAGAPVLNANKSHWLK CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEECCHHHHHHCCCCCCCCEECCCHHHHHH ACDQALGPMRVEVRATETPLSFSNDRSVDQLTAEAPPYDRSARVLGKTYATLVARFDVNS HHHHHCCCEEEEEEECCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCC RYMAIATQPPTTCLRPSISVELVLNNFRVTVAREFAPGTCAYNAIREHELRHVAVNRAVL CEEEEECCCCCHHHCCCCEEEEEEECEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHH PHAAEVIRKEIESEYGGRLYFGDPDRIAADLQAALTRHWLPRAQSLIELGLQAHEQIDTA HHHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RERERMSRVCNGEVQAVLQQLTRS HHHHHHHHHHCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA