Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is nahA [H]
Identifier: 187736498
GI number: 187736498
Start: 2452124
End: 2453638
Strand: Direct
Name: nahA [H]
Synonym: Amuc_2019
Alternate gene names: 187736498
Gene position: 2452124-2453638 (Clockwise)
Preceding gene: 187736497
Following gene: 187736499
Centisome position: 92.04
GC content: 56.04
Gene sequence:
>1515_bases ATGGTAGAATCTTTTCCGAAACAGTTCTTCATGATGTTTAAACTGCCCCTCATCCTGGCCTGCGCCATTTTTTCCGCCCA CATGGCATGTGCCGCCGCAGCGGACAAATACAGCGTTATCCCTGAACCGGAAAAAACGGAGCTGCAGCACAACAGTACCA GAACCTTAAAACTTCTTTCCGACCAGGAGGCTCCGACCCTGGGAACGGACGCCTACCGGCTCACAGTCACCCCGCAGGGG GCGCACCTTGCTTCCGGAGGAAGGGAAGGCAGAATTTACGGGCTGGCAACCCTCCGCCAGCTCCGGGACCAGCTGGCGGG ACAGCCGGAGGGCATCCCCTGCGGCGTCATCACGGACAAGCCGCGCTATCCGTGGCGCGGCCTCATGGTAGATCCCGCAC GCTTTTTCATCCCCACGGCCGATCTGAAAAAATTTGTGGATATGATGGCCTACTACAAATTCAACAAGCTCCAGATCCAC TTGACGGACGACCAGGGGTGGCGTCTTCCGGTGCCCGGCTACCCCAAACTCAAAAGCATCTCCTCCAAACGGAAAGAAAG CATGCGCAACGGAATCCCCCATGAAGGGATGTACACCAAACAGGAACTGAAAGAGCTGGTGGCGTACTGCGCAGCGCGCG GCATTGAGGTCATCCCTGAAATAGACGTGCCGGGGCACAACCAAGCCCTGGCGGCAGCCTACCCTGAATTCTTCTGCTTC CCGAACCCGGATACGAAAGTGAAGACCGATGAAGGCGTCACCCTCCACCTCATCTGCCCGCATAAACCGGAAGTCTGGAA ATTTTATGCCGCTGTTTTCAAGGAACTCAAAGATATTTTCCCGTCCGGCATCGTCCATCTGGGCGGCGATGAAGCACCCC TGGAAAAAACCTGGGCCAAATGCCCCCTCAGCATCCAGTACCGGGAGCAAAAAGGCATGAAGGACGTCCACGAGGAATTG AAGGAATTCATCAAAAAAATGTCCTCCATGCTGGCTGTTCACGGCAAGCGCATCCAACTATGGTATGAAAAACCGTGGGC CAGGGCCAACATCTACAACAAAGGAGACACCGTCTTCACCTGGCGCATGGGACTGACACCGTCCACCATCACGGAGACGA AAAAGCAGGGGCTCTCCCTGATCATTGCTGCCGGGGAATACTGTTACCTGGACTATCCGCAACTTCCAGGGCAAAGCAAC CGGGGATGGATGCCCACCACCACGCTGGAGCAAAGCTACAGGCTGGACCCCGCCTACGGCAGACCAGAAAAGGAAACAAA CCATATCACCGGCGTTCAGGGCACCGTGTGGGGAGAACATCTCCCTACCCTGAACCACATTCTCTACCGCGCCTATCCGC GTGCCTGCGCCATTGCGGAAGCCGGCTGGTCACCGATGAACGTGCGCTCCTGGGAAAACTTCCGGCGCAAGCTGGCCGAC CACCGTCAATTCATCCTCAAACGCTTCAATTATGATATGGAGCGCACCAAAGAAAACGAACCGCCTTTCAAATAA
Upstream 100 bases:
>100_bases TTCAATTATGATATGGAGCGCACTCAGGGGAATGAACCGGCCTTCCGCTGGGAAAACAACAAGTAATTTCACCGTTTTTC CTTATCACGCATCCCTTACC
Downstream 100 bases:
>100_bases TCCGCACTCTCTTTTCCCATGAGCAACATCAAATTTGCACGTCCGCACCGCCCTTCCGTAGAAGAACTGGCCCAGGGAGT ACTGGCCGGAAACCGCGCCC
Product: Beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 504; Mature: 504
Protein sequence:
>504_residues MVESFPKQFFMMFKLPLILACAIFSAHMACAAAADKYSVIPEPEKTELQHNSTRTLKLLSDQEAPTLGTDAYRLTVTPQG AHLASGGREGRIYGLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDPARFFIPTADLKKFVDMMAYYKFNKLQIH LTDDQGWRLPVPGYPKLKSISSKRKESMRNGIPHEGMYTKQELKELVAYCAARGIEVIPEIDVPGHNQALAAAYPEFFCF PNPDTKVKTDEGVTLHLICPHKPEVWKFYAAVFKELKDIFPSGIVHLGGDEAPLEKTWAKCPLSIQYREQKGMKDVHEEL KEFIKKMSSMLAVHGKRIQLWYEKPWARANIYNKGDTVFTWRMGLTPSTITETKKQGLSLIIAAGEYCYLDYPQLPGQSN RGWMPTTTLEQSYRLDPAYGRPEKETNHITGVQGTVWGEHLPTLNHILYRAYPRACAIAEAGWSPMNVRSWENFRRKLAD HRQFILKRFNYDMERTKENEPPFK
Sequences:
>Translated_504_residues MVESFPKQFFMMFKLPLILACAIFSAHMACAAAADKYSVIPEPEKTELQHNSTRTLKLLSDQEAPTLGTDAYRLTVTPQG AHLASGGREGRIYGLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDPARFFIPTADLKKFVDMMAYYKFNKLQIH LTDDQGWRLPVPGYPKLKSISSKRKESMRNGIPHEGMYTKQELKELVAYCAARGIEVIPEIDVPGHNQALAAAYPEFFCF PNPDTKVKTDEGVTLHLICPHKPEVWKFYAAVFKELKDIFPSGIVHLGGDEAPLEKTWAKCPLSIQYREQKGMKDVHEEL KEFIKKMSSMLAVHGKRIQLWYEKPWARANIYNKGDTVFTWRMGLTPSTITETKKQGLSLIIAAGEYCYLDYPQLPGQSN RGWMPTTTLEQSYRLDPAYGRPEKETNHITGVQGTVWGEHLPTLNHILYRAYPRACAIAEAGWSPMNVRSWENFRRKLAD HRQFILKRFNYDMERTKENEPPFK >Mature_504_residues MVESFPKQFFMMFKLPLILACAIFSAHMACAAAADKYSVIPEPEKTELQHNSTRTLKLLSDQEAPTLGTDAYRLTVTPQG AHLASGGREGRIYGLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDPARFFIPTADLKKFVDMMAYYKFNKLQIH LTDDQGWRLPVPGYPKLKSISSKRKESMRNGIPHEGMYTKQELKELVAYCAARGIEVIPEIDVPGHNQALAAAYPEFFCF PNPDTKVKTDEGVTLHLICPHKPEVWKFYAAVFKELKDIFPSGIVHLGGDEAPLEKTWAKCPLSIQYREQKGMKDVHEEL KEFIKKMSSMLAVHGKRIQLWYEKPWARANIYNKGDTVFTWRMGLTPSTITETKKQGLSLIIAAGEYCYLDYPQLPGQSN RGWMPTTTLEQSYRLDPAYGRPEKETNHITGVQGTVWGEHLPTLNHILYRAYPRACAIAEAGWSPMNVRSWENFRRKLAD HRQFILKRFNYDMERTKENEPPFK
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=448, Percent_Identity=28.5714285714286, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI189181666, Length=467, Percent_Identity=26.9807280513919, Blast_Score=141, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17569815, Length=360, Percent_Identity=26.6666666666667, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI281365639, Length=475, Percent_Identity=22.9473684210526, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI24657474, Length=475, Percent_Identity=22.9473684210526, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI24657468, Length=475, Percent_Identity=22.9473684210526, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI17647501, Length=475, Percent_Identity=22.9473684210526, Blast_Score=108, Evalue=9e-24, Organism=Drosophila melanogaster, GI45551090, Length=473, Percent_Identity=22.8329809725159, Blast_Score=86, Evalue=6e-17, Organism=Drosophila melanogaster, GI24653074, Length=473, Percent_Identity=22.8329809725159, Blast_Score=86, Evalue=7e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 57607; Mature: 57607
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVESFPKQFFMMFKLPLILACAIFSAHMACAAAADKYSVIPEPEKTELQHNSTRTLKLLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEC DQEAPTLGTDAYRLTVTPQGAHLASGGREGRIYGLATLRQLRDQLAGQPEGIPCGVITDK CCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCC PRYPWRGLMVDPARFFIPTADLKKFVDMMAYYKFNKLQIHLTDDQGWRLPVPGYPKLKSI CCCCCCCEEECCHHHEECHHHHHHHHHHHHHHEECEEEEEEECCCCCEECCCCCCCHHHH SSKRKESMRNGIPHEGMYTKQELKELVAYCAARGIEVIPEIDVPGHNQALAAAYPEFFCF HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCCEEEC PNPDTKVKTDEGVTLHLICPHKPEVWKFYAAVFKELKDIFPSGIVHLGGDEAPLEKTWAK CCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH CPLSIQYREQKGMKDVHEELKEFIKKMSSMLAVHGKRIQLWYEKPWARANIYNKGDTVFT CCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEE WRMGLTPSTITETKKQGLSLIIAAGEYCYLDYPQLPGQSNRGWMPTTTLEQSYRLDPAYG EEECCCCHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCC RPEKETNHITGVQGTVWGEHLPTLNHILYRAYPRACAIAEAGWSPMNVRSWENFRRKLAD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHH HRQFILKRFNYDMERTKENEPPFK HHHHHHHHHCCCHHHCCCCCCCCC >Mature Secondary Structure MVESFPKQFFMMFKLPLILACAIFSAHMACAAAADKYSVIPEPEKTELQHNSTRTLKLLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCEEEEEC DQEAPTLGTDAYRLTVTPQGAHLASGGREGRIYGLATLRQLRDQLAGQPEGIPCGVITDK CCCCCCCCCCCEEEEECCCCCEECCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCC PRYPWRGLMVDPARFFIPTADLKKFVDMMAYYKFNKLQIHLTDDQGWRLPVPGYPKLKSI CCCCCCCEEECCHHHEECHHHHHHHHHHHHHHEECEEEEEEECCCCCEECCCCCCCHHHH SSKRKESMRNGIPHEGMYTKQELKELVAYCAARGIEVIPEIDVPGHNQALAAAYPEFFCF HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCCEEEC PNPDTKVKTDEGVTLHLICPHKPEVWKFYAAVFKELKDIFPSGIVHLGGDEAPLEKTWAK CCCCCCEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHH CPLSIQYREQKGMKDVHEELKEFIKKMSSMLAVHGKRIQLWYEKPWARANIYNKGDTVFT CCCEEEEHHHCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEE WRMGLTPSTITETKKQGLSLIIAAGEYCYLDYPQLPGQSNRGWMPTTTLEQSYRLDPAYG EEECCCCHHHHHHHHCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCHHHHCCCCCCCCC RPEKETNHITGVQGTVWGEHLPTLNHILYRAYPRACAIAEAGWSPMNVRSWENFRRKLAD CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHCCCCCCCCHHHHHHHHHHHH HRQFILKRFNYDMERTKENEPPFK HHHHHHHHHCCCHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]