Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is nahA [H]
Identifier: 187736497
GI number: 187736497
Start: 2450608
End: 2452089
Strand: Direct
Name: nahA [H]
Synonym: Amuc_2018
Alternate gene names: 187736497
Gene position: 2450608-2452089 (Clockwise)
Preceding gene: 187736496
Following gene: 187736498
Centisome position: 91.99
GC content: 57.76
Gene sequence:
>1482_bases ATGGCACGTCCCTTACCCATTCTCGGCGGCATTCTGCTATCCTTCTCCCCTCCGGCAGAAGCAACAGCCCAATACAGCAT TATCCCTGAGCCGTCCAGAACGGAACTCAGACAGGAAACAGCTAAAACTTTACAGCTTCTTTCCGACCAGGAAGTTCCGA CCCTGGAAACGGACGCCTACCGGCTCACGGTCACCCCGCAGGGGGCGCACCTTGCTTCCGGAGGAAGGGAAGGCAGAATT TACGGGCTGGCAACCCTCCGCCAGCTCCGGGACCAGCTGGCGGGACAGCCGGAGGGCATTCCCTGCGGCGTCATCACGGA CAAGCCGCGCTATCCGTGGCGCGGCCTCATGGTGGATCCCGCGCGGCATTTCATCCCCGCGGCCGATCTGAAAAAATTTG TGGATATGATGGCCTACTACAAATTCAACAGGCTGCACCTGCATCTGACGGACAACCAGGGCTGGAGGCTGCCCGTGCCC GGCTACCCCAAATTGAAAAGCGTCGCATCCAGGCGGGAGGAAAGCTTCGGAGACGGAATCCCCCACGAAGGGATGTACAC CAAACAGGAACTGAAGGAACTGGTGGCGTACTGCGCAGCGCGCGGCATTGATGTCATCCCTGAAATAGACATGCCGGGCC ACAACCAGGCGCTTCATGCCGCCTACCCGGAATTTTTCTGCTTCCCCAAACCGGACATGAACGTGCGGACGACAGCGGGA AACAGCAAGGAACTGGTCTGTCCCCAGAAGCCGGAAGTCTGGAAATTTTATGCCTCCGTCTTTAATGAACTCAAGGATAT CTTCCCGTCCGGTATCGTTCATCTGGGCGGGGACGAGGCCCCCACGGAACTCTGGGAAAAATGCCCTCTGTGCCGGGAAG CCCGGACCAGGGCAGCCATGAAAGACGAACAGGAACAGATGAAAGCCTTTTTTGCGAAAACGGCAGCTCTGCTTGCCAAA AACGGGCAAACGCCGCAATTCTGGTATGAGGGGAACGCCGGCATTTACCATCCGGGGGAAACGGTTTACGCATGGCGGCA AGGCCAGGCCCTCCAGTCCATTGAGAAGACGAAAAAGGCGGGATTGAACCTGATTATGGCCTCCAGCGAATACTGTTACC TGGATTTTCCCCAGATTCAGGGGCAGCGCAACTGGGGATGGATGAAAACCACCACCCTGCAAAAATGTTATGACCTGGAT CCCGCTTTTGGAAAACCGGAGAAAGAGGCAGGCCATATCCGGGGCGTGCATGCCCCCGTATGGGCGGAACGCCTGCCGGA CTTGAACCACTTGCTTTACCGCGCCTATCCCCGCGCCTGCGCCATTGCGGAAGCCGGCTGGTCACCGATGGGCGTGCGCT CCTGGGAAAACTTCCGGCGCAAGCTGGCCGACCACCGTCAATTCATCCTCAAACGCTTCAATTATGATATGGAGCGCACT CAGGGGAATGAACCGGCCTTCCGCTGGGAAAACAACAAGTAA
Upstream 100 bases:
>100_bases TTACCGATTCCGCTCTGGACAACAAGGAGACGGCAAAAAATCTGGAAGCAAAAGATGATTCTTTGACAGAACCTGTTTCC TCCCCGTTTATATTGGAAAT
Downstream 100 bases:
>100_bases TTTCACCGTTTTTCCTTATCACGCATCCCTTACCATGGTAGAATCTTTTCCGAAACAGTTCTTCATGATGTTTAAACTGC CCCTCATCCTGGCCTGCGCC
Product: Beta-N-acetylhexosaminidase
Products: NA
Alternate protein names: Beta-GlcNAcase; Beta-N-acetylhexosaminidase; Beta-NAHase; N-acetyl-beta-glucosaminidase [H]
Number of amino acids: Translated: 493; Mature: 492
Protein sequence:
>493_residues MARPLPILGGILLSFSPPAEATAQYSIIPEPSRTELRQETAKTLQLLSDQEVPTLETDAYRLTVTPQGAHLASGGREGRI YGLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDPARHFIPAADLKKFVDMMAYYKFNRLHLHLTDNQGWRLPVP GYPKLKSVASRREESFGDGIPHEGMYTKQELKELVAYCAARGIDVIPEIDMPGHNQALHAAYPEFFCFPKPDMNVRTTAG NSKELVCPQKPEVWKFYASVFNELKDIFPSGIVHLGGDEAPTELWEKCPLCREARTRAAMKDEQEQMKAFFAKTAALLAK NGQTPQFWYEGNAGIYHPGETVYAWRQGQALQSIEKTKKAGLNLIMASSEYCYLDFPQIQGQRNWGWMKTTTLQKCYDLD PAFGKPEKEAGHIRGVHAPVWAERLPDLNHLLYRAYPRACAIAEAGWSPMGVRSWENFRRKLADHRQFILKRFNYDMERT QGNEPAFRWENNK
Sequences:
>Translated_493_residues MARPLPILGGILLSFSPPAEATAQYSIIPEPSRTELRQETAKTLQLLSDQEVPTLETDAYRLTVTPQGAHLASGGREGRI YGLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDPARHFIPAADLKKFVDMMAYYKFNRLHLHLTDNQGWRLPVP GYPKLKSVASRREESFGDGIPHEGMYTKQELKELVAYCAARGIDVIPEIDMPGHNQALHAAYPEFFCFPKPDMNVRTTAG NSKELVCPQKPEVWKFYASVFNELKDIFPSGIVHLGGDEAPTELWEKCPLCREARTRAAMKDEQEQMKAFFAKTAALLAK NGQTPQFWYEGNAGIYHPGETVYAWRQGQALQSIEKTKKAGLNLIMASSEYCYLDFPQIQGQRNWGWMKTTTLQKCYDLD PAFGKPEKEAGHIRGVHAPVWAERLPDLNHLLYRAYPRACAIAEAGWSPMGVRSWENFRRKLADHRQFILKRFNYDMERT QGNEPAFRWENNK >Mature_492_residues ARPLPILGGILLSFSPPAEATAQYSIIPEPSRTELRQETAKTLQLLSDQEVPTLETDAYRLTVTPQGAHLASGGREGRIY GLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDPARHFIPAADLKKFVDMMAYYKFNRLHLHLTDNQGWRLPVPG YPKLKSVASRREESFGDGIPHEGMYTKQELKELVAYCAARGIDVIPEIDMPGHNQALHAAYPEFFCFPKPDMNVRTTAGN SKELVCPQKPEVWKFYASVFNELKDIFPSGIVHLGGDEAPTELWEKCPLCREARTRAAMKDEQEQMKAFFAKTAALLAKN GQTPQFWYEGNAGIYHPGETVYAWRQGQALQSIEKTKKAGLNLIMASSEYCYLDFPQIQGQRNWGWMKTTTLQKCYDLDP AFGKPEKEAGHIRGVHAPVWAERLPDLNHLLYRAYPRACAIAEAGWSPMGVRSWENFRRKLADHRQFILKRFNYDMERTQ GNEPAFRWENNK
Specific function: Unknown
COG id: COG3525
COG function: function code G; N-acetyl-beta-hexosaminidase
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 20 family [H]
Homologues:
Organism=Homo sapiens, GI4504373, Length=454, Percent_Identity=25.9911894273128, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI189181666, Length=458, Percent_Identity=27.9475982532751, Blast_Score=153, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17569815, Length=357, Percent_Identity=27.1708683473389, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24657468, Length=472, Percent_Identity=25.4237288135593, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI17647501, Length=472, Percent_Identity=25.4237288135593, Blast_Score=119, Evalue=4e-27, Organism=Drosophila melanogaster, GI281365639, Length=472, Percent_Identity=25.2118644067797, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24657474, Length=472, Percent_Identity=25.2118644067797, Blast_Score=119, Evalue=5e-27, Organism=Drosophila melanogaster, GI24653074, Length=419, Percent_Identity=25.2983293556086, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI45551090, Length=424, Percent_Identity=25.4716981132075, Blast_Score=95, Evalue=1e-19, Organism=Drosophila melanogaster, GI17933586, Length=466, Percent_Identity=23.3905579399142, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015882 - InterPro: IPR001540 - InterPro: IPR015883 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR011658 [H]
Pfam domain/function: PF00728 Glyco_hydro_20; PF02838 Glyco_hydro_20b [H]
EC number: =3.2.1.52 [H]
Molecular weight: Translated: 56045; Mature: 55913
Theoretical pI: Translated: 8.44; Mature: 8.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPLPILGGILLSFSPPAEATAQYSIIPEPSRTELRQETAKTLQLLSDQEVPTLETDAY CCCCCCHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCE RLTVTPQGAHLASGGREGRIYGLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDP EEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECC ARHFIPAADLKKFVDMMAYYKFNRLHLHLTDNQGWRLPVPGYPKLKSVASRREESFGDGI HHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCC PHEGMYTKQELKELVAYCAARGIDVIPEIDMPGHNQALHAAYPEFFCFPKPDMNVRTTAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCEEECCC NSKELVCPQKPEVWKFYASVFNELKDIFPSGIVHLGGDEAPTELWEKCPLCREARTRAAM CCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHH KDEQEQMKAFFAKTAALLAKNGQTPQFWYEGNAGIYHPGETVYAWRQGQALQSIEKTKKA HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCEEEEECCCHHHHHHHHHHHC GLNLIMASSEYCYLDFPQIQGQRNWGWMKTTTLQKCYDLDPAFGKPEKEAGHIRGVHAPV CCEEEEECCCEEEEECHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH WAERLPDLNHLLYRAYPRACAIAEAGWSPMGVRSWENFRRKLADHRQFILKRFNYDMERT HHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHC QGNEPAFRWENNK CCCCCCEECCCCC >Mature Secondary Structure ARPLPILGGILLSFSPPAEATAQYSIIPEPSRTELRQETAKTLQLLSDQEVPTLETDAY CCCCCHHHHHHHCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCE RLTVTPQGAHLASGGREGRIYGLATLRQLRDQLAGQPEGIPCGVITDKPRYPWRGLMVDP EEEECCCCCCCCCCCCCCEEEHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCEECC ARHFIPAADLKKFVDMMAYYKFNRLHLHLTDNQGWRLPVPGYPKLKSVASRREESFGDGI HHHHCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCEECCCCCHHHHHHHHHHHHHHCCCC PHEGMYTKQELKELVAYCAARGIDVIPEIDMPGHNQALHAAYPEFFCFPKPDMNVRTTAG CCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHCCCCCEECCCCCCCEEECCC NSKELVCPQKPEVWKFYASVFNELKDIFPSGIVHLGGDEAPTELWEKCPLCREARTRAAM CCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHCCCHHHHHHHHHH KDEQEQMKAFFAKTAALLAKNGQTPQFWYEGNAGIYHPGETVYAWRQGQALQSIEKTKKA HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEECCCCEEEEECCCHHHHHHHHHHHC GLNLIMASSEYCYLDFPQIQGQRNWGWMKTTTLQKCYDLDPAFGKPEKEAGHIRGVHAPV CCEEEEECCCEEEEECHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCH WAERLPDLNHLLYRAYPRACAIAEAGWSPMGVRSWENFRRKLADHRQFILKRFNYDMERT HHHHCCCHHHHHHHHCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHC QGNEPAFRWENNK CCCCCCEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7881557; 12949112 [H]