Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is argK [C]
Identifier: 187736499
GI number: 187736499
Start: 2453657
End: 2454676
Strand: Direct
Name: argK [C]
Synonym: Amuc_2020
Alternate gene names: 187736499
Gene position: 2453657-2454676 (Clockwise)
Preceding gene: 187736498
Following gene: 187736501
Centisome position: 92.1
GC content: 59.22
Gene sequence:
>1020_bases ATGAGCAACATCAAATTTGCACGTCCGCACCGCCCTTCCGTAGAAGAACTGGCCCAGGGAGTACTGGCCGGAAACCGCGC CCTGCTGGGAAGGGCCATTACACTGATAGAAAGCAATGCCGTCCGGGACCAGGAATCTTCCCGCGCCCTCATCTCCAGGC TCCTTCCCCATTCGGGCAACGCCGTCCGCATCGGCATTACGGGCGTTCCGGGCGCCGGGAAATCCTCTTTCATTGAAGCC TTCGGCACTTACCTGTGCAAAAAAGGGTTCAAGGTGGCTGTGCTGGCTATTGACCCGTCTTCTTCAGTCTCCCGCGGTTC CATTATGGGAGACAAAACACGCATGGAGGAACTCTCCGGAGAGGAAAACGCCTTCATCCGCCCTTCCCCCTCCGGCGGCT CTTTGGGCGGCGTAGCCCGGAAAACGCGTGAAACCATGATTGCATGCGAAGCTGCGGGCTTTGACATTATTCTCATTGAA ACCGTGGGAGTCGGCCAGTCGGAAACTACGGTGCGCTCCATGGTGGACATTTTCATGCTCCTGCTCATCACCGGAGCCGG GGACGATCTCCAGGGCATCAAGCGGGGCATCATGGAACTGGCGGATATCCTAGTAGTTACCAAAGATGACGGCGACAACC GCCAGCGCGCCGCAGCCCACTGCCAGGAACTGAAAATGGTACTCCACTACCTGCAAAGCCCCACTCCCGGCTGGACGCCC TCCGTCCTCACCTGTTCCTCCCTGGAGGGACGCGGCCTGGACACCATTGAAGAGACGCTCTTCCGCTTCCGGGACAGCAT GAAGGAATCCGGATTCTGGTACAGCCGCCGCCGGAGCCAGTCCCTTTCATGGGTCCAGTCCCTGGTGCATGAAGCCCTGC TCACCGCTTTTGAACAGCACCCCGCCGTAGCGTCCCGCATGCCCATTCTGGAAAACATGGTGGCGGGGGACAAAATGGAC CCCGTTTCCGCCGCACATGACCTGCTGAGCCACTTTACTTATCCCGCGCCCGGACATTAA
Upstream 100 bases:
>100_bases GGCCGACCACCGTCAATTCATCCTCAAACGCTTCAATTATGATATGGAGCGCACCAAAGAAAACGAACCGCCTTTCAAAT AATCCGCACTCTCTTTTCCC
Downstream 100 bases:
>100_bases AGAAATCTTCCAGAACCCTGGCGTAAACTTTCTTTTTAAACTCCGGCAGCCACTCCAGCTTAAATTCGGCTGGGGCTATC CACTTGTAATCGCAAAACTC
Product: LAO/AO transporter ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 339; Mature: 338
Protein sequence:
>339_residues MSNIKFARPHRPSVEELAQGVLAGNRALLGRAITLIESNAVRDQESSRALISRLLPHSGNAVRIGITGVPGAGKSSFIEA FGTYLCKKGFKVAVLAIDPSSSVSRGSIMGDKTRMEELSGEENAFIRPSPSGGSLGGVARKTRETMIACEAAGFDIILIE TVGVGQSETTVRSMVDIFMLLLITGAGDDLQGIKRGIMELADILVVTKDDGDNRQRAAAHCQELKMVLHYLQSPTPGWTP SVLTCSSLEGRGLDTIEETLFRFRDSMKESGFWYSRRRSQSLSWVQSLVHEALLTAFEQHPAVASRMPILENMVAGDKMD PVSAAHDLLSHFTYPAPGH
Sequences:
>Translated_339_residues MSNIKFARPHRPSVEELAQGVLAGNRALLGRAITLIESNAVRDQESSRALISRLLPHSGNAVRIGITGVPGAGKSSFIEA FGTYLCKKGFKVAVLAIDPSSSVSRGSIMGDKTRMEELSGEENAFIRPSPSGGSLGGVARKTRETMIACEAAGFDIILIE TVGVGQSETTVRSMVDIFMLLLITGAGDDLQGIKRGIMELADILVVTKDDGDNRQRAAAHCQELKMVLHYLQSPTPGWTP SVLTCSSLEGRGLDTIEETLFRFRDSMKESGFWYSRRRSQSLSWVQSLVHEALLTAFEQHPAVASRMPILENMVAGDKMD PVSAAHDLLSHFTYPAPGH >Mature_338_residues SNIKFARPHRPSVEELAQGVLAGNRALLGRAITLIESNAVRDQESSRALISRLLPHSGNAVRIGITGVPGAGKSSFIEAF GTYLCKKGFKVAVLAIDPSSSVSRGSIMGDKTRMEELSGEENAFIRPSPSGGSLGGVARKTRETMIACEAAGFDIILIET VGVGQSETTVRSMVDIFMLLLITGAGDDLQGIKRGIMELADILVVTKDDGDNRQRAAAHCQELKMVLHYLQSPTPGWTPS VLTCSSLEGRGLDTIEETLFRFRDSMKESGFWYSRRRSQSLSWVQSLVHEALLTAFEQHPAVASRMPILENMVAGDKMDP VSAAHDLLSHFTYPAPGH
Specific function: May have GTPase activity. May also bind and hydrolyze ATP. May function as chaperone [H]
COG id: COG1703
COG function: function code E; Putative periplasmic protein kinase ArgK and related GTPases of G3E family
Gene ontology:
Cell location: Inner Membrane-Associated [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ArgK family [H]
Homologues:
Organism=Homo sapiens, GI26892295, Length=333, Percent_Identity=45.3453453453453, Blast_Score=278, Evalue=6e-75, Organism=Escherichia coli, GI1789285, Length=272, Percent_Identity=50.7352941176471, Blast_Score=288, Evalue=3e-79, Organism=Caenorhabditis elegans, GI71994271, Length=332, Percent_Identity=42.1686746987952, Blast_Score=263, Evalue=1e-70, Organism=Caenorhabditis elegans, GI71994275, Length=271, Percent_Identity=46.1254612546125, Blast_Score=245, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005129 - InterPro: IPR003593 [H]
Pfam domain/function: PF03308 ArgK [H]
EC number: 2.7.-.- [C]
Molecular weight: Translated: 36695; Mature: 36564
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIKFARPHRPSVEELAQGVLAGNRALLGRAITLIESNAVRDQESSRALISRLLPHSGN CCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC AVRIGITGVPGAGKSSFIEAFGTYLCKKGFKVAVLAIDPSSSVSRGSIMGDKTRMEELSG EEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCC EENAFIRPSPSGGSLGGVARKTRETMIACEAAGFDIILIETVGVGQSETTVRSMVDIFML CCCCEECCCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEEECCCCCHHHHHHHHHHHHH LLITGAGDDLQGIKRGIMELADILVVTKDDGDNRQRAAAHCQELKMVLHYLQSPTPGWTP HHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC SVLTCSSLEGRGLDTIEETLFRFRDSMKESGFWYSRRRSQSLSWVQSLVHEALLTAFEQH CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAVASRMPILENMVAGDKMDPVSAAHDLLSHFTYPAPGH CHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SNIKFARPHRPSVEELAQGVLAGNRALLGRAITLIESNAVRDQESSRALISRLLPHSGN CCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCC AVRIGITGVPGAGKSSFIEAFGTYLCKKGFKVAVLAIDPSSSVSRGSIMGDKTRMEELSG EEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHCC EENAFIRPSPSGGSLGGVARKTRETMIACEAAGFDIILIETVGVGQSETTVRSMVDIFML CCCCEECCCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEEEECCCCCHHHHHHHHHHHHH LLITGAGDDLQGIKRGIMELADILVVTKDDGDNRQRAAAHCQELKMVLHYLQSPTPGWTP HHHHCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC SVLTCSSLEGRGLDTIEETLFRFRDSMKESGFWYSRRRSQSLSWVQSLVHEALLTAFEQH CEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC PAVASRMPILENMVAGDKMDPVSAAHDLLSHFTYPAPGH CHHHHHCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Arg [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8421698; 11259647 [H]