| Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
|---|---|
| Accession | NC_010655 |
| Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is mutA [H]
Identifier: 187736464
GI number: 187736464
Start: 2408273
End: 2410327
Strand: Reverse
Name: mutA [H]
Synonym: Amuc_1984
Alternate gene names: 187736464
Gene position: 2410327-2408273 (Counterclockwise)
Preceding gene: 187736470
Following gene: 187736463
Centisome position: 90.47
GC content: 60.68
Gene sequence:
>2055_bases ATGCAACAGGGAAATAAAACAACGGCTCCGGAAATTGATTTCGGAGAATTCGCACCAGCCACATACGCCGAATGGCGCGA GGCAGCAGTCGCTGCCCTGAAAGGGGCTGATTTTGACAAAAAGCTTTTTACCAAGCTTGTGGAGGGAATTACCCTGCATC CCATCTATAACAAATGGGATGAACATTCCCCGGTAATGCCTGCCGGGCAATTTCCGTACCGCCGCGGAACGCGCGCCCTG GGCTATATGGAAAAGCCCTGCGAAATCGCCCAGAGCATTCCCGCTTCCTCTCCGGAAGACTTCAACGCCAAGCTTCTGCA TGACCTGGACCGCGGCCTGACCGCCGTAAACGTTCAGCTCAACTGCAAATGCGGCCTGAAGCTGCGCAAGCAGGCTGACT GGGATGCGGCCCTCAGGGGCGTCCGGCTGGACGGGCTTCCCGTATATGTCACTCCCGGTTCCTGCGGCCTGGGAACCCTC TCCATGTTCCTGAACACCTGCAAGGCCGCCGGCGTCAAGACGGCGGACCTCAAGGGCGGCGTTCTGTATGACCCGGTGGG GAAAGCTGTGATGAAGGGCTCCCTTTGCGGGGGGAAGGGCATCTGCGCCTACTATGACCAGATGGCCGTGATGACCAAAT GGGCTGTTGCCAACGCTCCCGGCTTCCAGACCATCGGCGTCAGCGGGCTGCCTTACGCGGACTCCGGAGCTTCCGCCTTT GAGGAAGTGGGCGCCATGCTGTCCACTGCCGTGGCCTACCTGCGCGCCATGGAGGAACGCGGCCTCTCCGTGGATGAAAC TGCGGCGCACATGCGCTTTACGGTTTCCATCGGCGCCAACCTGTTCCTGGAAATCGCCAAAATCCGCGCTCTGCGCGAAC TTTGGGCCATCATCGTAAAAGAATGCGGCGGCAGCGAGGAAGCTGCCAAAATCAAGCTCCATGCCCGCACCTCCTTCTGG ACCCTCTCCAAGGTGGATCCCTGGGTCAACCTGCTGCGCGGCTCCGCCCAGGCGTTCTCCGCCATCATGGGCGGCGTGGA CAGTATTGACGTTCTTCCCTTTGACGCTGCCGTGCGCATGCCGGACGAATTCTCTCGCCGCATTGCCCGCAACTGCCCGC TGATTCTGCTGGGCGAATGCAATCTGGACAAGGTCGTTGACCCCGCCGGCGGTTCCTGGTACCTGGAAAACCTGACGGAT GAAGCCTCCCGGAAGATATGGGAATTCTTCCAGGGCATCGAAAAGGAAGGCGGCATCGTCAAGGCCCTCAAAGCCGGCAG CATCCAGAAGAAGGTGAACGCCACCGCCGCCAGGCGTTACGAGCTGGCGGACCAGCGCCGGCAGTCCATCGTGGGCGTCA ACCAGTATGTCAACCTGGCGGAGAAAAAGCTGGAAGTTCCGGAAGGCTCCTGCTGTTCCGCCCACAAGGGCCACGGCTGC TGCAAGAATGCGGATATTCAGCTCCCGGTCGTGGAAATGAGCGTGGACTCCGCCTGCAAGGCCGCCGAAGAAGGCTTTTC CACCTGCCTTATCAACAAGGCCCTGGTGGCCGGCGCTGACTGCAAGTGCGGCGAACCCCTGGAAATGGAAGCCCTGCCGA AGCGCCGCCTGGCGGAACGTTTTGAATCCCTGCTCGCCAAGGCTGACGCCTGGGTGGCAGAAAAGGGTTCCCGCCCGATG GTCTTCTTCGCCAACATGGGGCCGCTCCGCCAGCACAAGGCCCGCGCGGACTTCTCCCGCGACTTCCTGCGCGCCGGCGG TCTGGATGTGGTTTATCCGGCCGGCTTCCAAACTCCGGAAGACGCGGCCAGGGCAGCTGCGGAAAGCGGCTGCGCCGTGT GCGTCATCTGCTCCACGGATGACACTTATCCGGAAATCGTCCCCGCCTTCTGCAAGGCTCTCAGGGAGACCAGACCGGAC ATGATGGTGGCCCTTGCCGGTTATCCGGCCGACTATGTGGAAGCATTCAAGGAAGCCGGCGTGGACATCTTCATCCACGT CAAGGCCAACTGCTACAACACCGTTGAAGCCATTCAAAACAAAATCGGCCTTTAA
Upstream 100 bases:
>100_bases TTTACACTTTGATTTCCTAAAATAATGTTGCGCTTTAAACTTGGCCTGGTTTGCGCATAGTTAAAAACCAACATATTAGG CCTTACCCATTGACTTCGCC
Downstream 100 bases:
>100_bases TAACCACCAACCTATTCCACCCAATGAGCAATATTCCTGATTTTGCATCCGCCTCCTATCCTGAAATCAAGGCTGGTGCC CCGTCCCCGGCTTCCGAAAC
Product: Methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM-beta [H]
Number of amino acids: Translated: 684; Mature: 684
Protein sequence:
>684_residues MQQGNKTTAPEIDFGEFAPATYAEWREAAVAALKGADFDKKLFTKLVEGITLHPIYNKWDEHSPVMPAGQFPYRRGTRAL GYMEKPCEIAQSIPASSPEDFNAKLLHDLDRGLTAVNVQLNCKCGLKLRKQADWDAALRGVRLDGLPVYVTPGSCGLGTL SMFLNTCKAAGVKTADLKGGVLYDPVGKAVMKGSLCGGKGICAYYDQMAVMTKWAVANAPGFQTIGVSGLPYADSGASAF EEVGAMLSTAVAYLRAMEERGLSVDETAAHMRFTVSIGANLFLEIAKIRALRELWAIIVKECGGSEEAAKIKLHARTSFW TLSKVDPWVNLLRGSAQAFSAIMGGVDSIDVLPFDAAVRMPDEFSRRIARNCPLILLGECNLDKVVDPAGGSWYLENLTD EASRKIWEFFQGIEKEGGIVKALKAGSIQKKVNATAARRYELADQRRQSIVGVNQYVNLAEKKLEVPEGSCCSAHKGHGC CKNADIQLPVVEMSVDSACKAAEEGFSTCLINKALVAGADCKCGEPLEMEALPKRRLAERFESLLAKADAWVAEKGSRPM VFFANMGPLRQHKARADFSRDFLRAGGLDVVYPAGFQTPEDAARAAAESGCAVCVICSTDDTYPEIVPAFCKALRETRPD MMVALAGYPADYVEAFKEAGVDIFIHVKANCYNTVEAIQNKIGL
Sequences:
>Translated_684_residues MQQGNKTTAPEIDFGEFAPATYAEWREAAVAALKGADFDKKLFTKLVEGITLHPIYNKWDEHSPVMPAGQFPYRRGTRAL GYMEKPCEIAQSIPASSPEDFNAKLLHDLDRGLTAVNVQLNCKCGLKLRKQADWDAALRGVRLDGLPVYVTPGSCGLGTL SMFLNTCKAAGVKTADLKGGVLYDPVGKAVMKGSLCGGKGICAYYDQMAVMTKWAVANAPGFQTIGVSGLPYADSGASAF EEVGAMLSTAVAYLRAMEERGLSVDETAAHMRFTVSIGANLFLEIAKIRALRELWAIIVKECGGSEEAAKIKLHARTSFW TLSKVDPWVNLLRGSAQAFSAIMGGVDSIDVLPFDAAVRMPDEFSRRIARNCPLILLGECNLDKVVDPAGGSWYLENLTD EASRKIWEFFQGIEKEGGIVKALKAGSIQKKVNATAARRYELADQRRQSIVGVNQYVNLAEKKLEVPEGSCCSAHKGHGC CKNADIQLPVVEMSVDSACKAAEEGFSTCLINKALVAGADCKCGEPLEMEALPKRRLAERFESLLAKADAWVAEKGSRPM VFFANMGPLRQHKARADFSRDFLRAGGLDVVYPAGFQTPEDAARAAAESGCAVCVICSTDDTYPEIVPAFCKALRETRPD MMVALAGYPADYVEAFKEAGVDIFIHVKANCYNTVEAIQNKIGL >Mature_684_residues MQQGNKTTAPEIDFGEFAPATYAEWREAAVAALKGADFDKKLFTKLVEGITLHPIYNKWDEHSPVMPAGQFPYRRGTRAL GYMEKPCEIAQSIPASSPEDFNAKLLHDLDRGLTAVNVQLNCKCGLKLRKQADWDAALRGVRLDGLPVYVTPGSCGLGTL SMFLNTCKAAGVKTADLKGGVLYDPVGKAVMKGSLCGGKGICAYYDQMAVMTKWAVANAPGFQTIGVSGLPYADSGASAF EEVGAMLSTAVAYLRAMEERGLSVDETAAHMRFTVSIGANLFLEIAKIRALRELWAIIVKECGGSEEAAKIKLHARTSFW TLSKVDPWVNLLRGSAQAFSAIMGGVDSIDVLPFDAAVRMPDEFSRRIARNCPLILLGECNLDKVVDPAGGSWYLENLTD EASRKIWEFFQGIEKEGGIVKALKAGSIQKKVNATAARRYELADQRRQSIVGVNQYVNLAEKKLEVPEGSCCSAHKGHGC CKNADIQLPVVEMSVDSACKAAEEGFSTCLINKALVAGADCKCGEPLEMEALPKRRLAERFESLLAKADAWVAEKGSRPM VFFANMGPLRQHKARADFSRDFLRAGGLDVVYPAGFQTPEDAARAAAESGCAVCVICSTDDTYPEIVPAFCKALRETRPD MMVALAGYPADYVEAFKEAGVDIFIHVKANCYNTVEAIQNKIGL
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=699, Percent_Identity=26.3233190271817, Blast_Score=206, Evalue=9e-53, Organism=Escherichia coli, GI1789284, Length=704, Percent_Identity=27.2727272727273, Blast_Score=235, Evalue=7e-63, Organism=Caenorhabditis elegans, GI25144500, Length=700, Percent_Identity=26.2857142857143, Blast_Score=219, Evalue=4e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 74101; Mature: 74101
Theoretical pI: Translated: 6.74; Mature: 6.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQGNKTTAPEIDFGEFAPATYAEWREAAVAALKGADFDKKLFTKLVEGITLHPIYNKWD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCHHCCCC EHSPVMPAGQFPYRRGTRALGYMEKPCEIAQSIPASSPEDFNAKLLHDLDRGLTAVNVQL CCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEE NCKCGLKLRKQADWDAALRGVRLDGLPVYVTPGSCGLGTLSMFLNTCKAAGVKTADLKGG EEEECCEECCCCCHHHHHCCEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCC VLYDPVGKAVMKGSLCGGKGICAYYDQMAVMTKWAVANAPGFQTIGVSGLPYADSGASAF EEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHH EEVGAMLSTAVAYLRAMEERGLSVDETAAHMRFTVSIGANLFLEIAKIRALRELWAIIVK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHH ECGGSEEAAKIKLHARTSFWTLSKVDPWVNLLRGSAQAFSAIMGGVDSIDVLPFDAAVRM HCCCCCCCEEEEEEECCCEEEHHHCCHHHHHHHCCHHHHHHHHCCCCCEEEECCCHHHCC PDEFSRRIARNCPLILLGECNLDKVVDPAGGSWYLENLTDEASRKIWEFFQGIEKEGGIV CHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEE KALKAGSIQKKVNATAARRYELADQRRQSIVGVNQYVNLAEKKLEVPEGSCCSAHKGHGC EEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC CKNADIQLPVVEMSVDSACKAAEEGFSTCLINKALVAGADCKCGEPLEMEALPKRRLAER CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHH FESLLAKADAWVAEKGSRPMVFFANMGPLRQHKARADFSRDFLRAGGLDVVYPAGFQTPE HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHH DAARAAAESGCAVCVICSTDDTYPEIVPAFCKALRETRPDMMVALAGYPADYVEAFKEAG HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCC VDIFIHVKANCYNTVEAIQNKIGL CEEEEEEECCCHHHHHHHHHHCCC >Mature Secondary Structure MQQGNKTTAPEIDFGEFAPATYAEWREAAVAALKGADFDKKLFTKLVEGITLHPIYNKWD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEECCHHCCCC EHSPVMPAGQFPYRRGTRALGYMEKPCEIAQSIPASSPEDFNAKLLHDLDRGLTAVNVQL CCCCCCCCCCCCCCCCCCHHCCCCCHHHHHHHCCCCCCCCCCHHHHHHHHCCCEEEEEEE NCKCGLKLRKQADWDAALRGVRLDGLPVYVTPGSCGLGTLSMFLNTCKAAGVKTADLKGG EEEECCEECCCCCHHHHHCCEEECCEEEEECCCCCCHHHHHHHHHHHHHCCCEEECCCCC VLYDPVGKAVMKGSLCGGKGICAYYDQMAVMTKWAVANAPGFQTIGVSGLPYADSGASAF EEECCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHH EEVGAMLSTAVAYLRAMEERGLSVDETAAHMRFTVSIGANLFLEIAKIRALRELWAIIVK HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEEEEEECCHHHHHHHHHHHHHHHHHHHHH ECGGSEEAAKIKLHARTSFWTLSKVDPWVNLLRGSAQAFSAIMGGVDSIDVLPFDAAVRM HCCCCCCCEEEEEEECCCEEEHHHCCHHHHHHHCCHHHHHHHHCCCCCEEEECCCHHHCC PDEFSRRIARNCPLILLGECNLDKVVDPAGGSWYLENLTDEASRKIWEFFQGIEKEGGIV CHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCCCCEE KALKAGSIQKKVNATAARRYELADQRRQSIVGVNQYVNLAEKKLEVPEGSCCSAHKGHGC EEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC CKNADIQLPVVEMSVDSACKAAEEGFSTCLINKALVAGADCKCGEPLEMEALPKRRLAER CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCHHHHHHH FESLLAKADAWVAEKGSRPMVFFANMGPLRQHKARADFSRDFLRAGGLDVVYPAGFQTPE HHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHH DAARAAAESGCAVCVICSTDDTYPEIVPAFCKALRETRPDMMVALAGYPADYVEAFKEAG HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCC VDIFIHVKANCYNTVEAIQNKIGL CEEEEEEECCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8566763; 12949112 [H]