Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187736307

Identifier: 187736307

GI number: 187736307

Start: 2210328

End: 2210609

Strand: Reverse

Name: 187736307

Synonym: Amuc_1820

Alternate gene names: NA

Gene position: 2210609-2210328 (Counterclockwise)

Preceding gene: 187736308

Following gene: 187736303

Centisome position: 82.98

GC content: 58.16

Gene sequence:

>282_bases
ATGCATCCTGCCGTAGAACAAATCCGCCAGTACCTGCAATTGATCGCCCTGCAATTCGTGCAACACCCGGAACAGGCGGA
ATTGCGCGTTGCGGAATCCCCGCAGGGAGACGCCGTCCGCTTCCGCCTGATTCTGGAAAAAACGGACGTGGCGCGCATCA
TCGGCCGCAATGGAATGACGGCCTCCGCCATTCGTTCCCTGGCGAAGGCGGCTGGGGAAAAACACGGCATCAAGGTCATT
GTGCATATGCTTTCCCATGAAGAGGCGGCTGAACAGCCGTAA

Upstream 100 bases:

>100_bases
GGCCGGGGCGACTTTCTTTTTCAGGGAATGTCTGGAATTGCATCTTTTCAATCAGGCGGCTTTATAGTATGGTTCATGAA
AATAACCCATATTTCCCTTC

Downstream 100 bases:

>100_bases
ACGCACTCCTGCGCCTATAATTCCACATCCAGCACCAGGGCCAGAAGGTTAAATGGAGCCGGAGTCTCCACACGGAGGGC
AAAGGAAGACTGCTCATCCA

Product: KH domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMTASAIRSLAKAAGEKHGIKVI
VHMLSHEEAAEQP

Sequences:

>Translated_93_residues
MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMTASAIRSLAKAAGEKHGIKVI
VHMLSHEEAAEQP
>Mature_93_residues
MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMTASAIRSLAKAAGEKHGIKVI
VHMLSHEEAAEQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10345; Mature: 10345

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMT
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCCC
ASAIRSLAKAAGEKHGIKVIVHMLSHEEAAEQP
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MHPAVEQIRQYLQLIALQFVQHPEQAELRVAESPQGDAVRFRLILEKTDVARIIGRNGMT
CCHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEEHHHHHHHHHHHHHCCCCCC
ASAIRSLAKAAGEKHGIKVIVHMLSHEEAAEQP
HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA