Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is mepA [H]

Identifier: 187736300

GI number: 187736300

Start: 2199958

End: 2201343

Strand: Reverse

Name: mepA [H]

Synonym: Amuc_1813

Alternate gene names: 187736300

Gene position: 2201343-2199958 (Counterclockwise)

Preceding gene: 187736303

Following gene: 187736299

Centisome position: 82.63

GC content: 58.95

Gene sequence:

>1386_bases
ATGGCAGCCCAGTCACGCAACATCGCAGAATTGGAAAACGCATCCGTATGGCGTCTGCTGATCCAGTACTCCCTGCCCTC
CATCGCCGGCATGGTGGTATACTCCCTGTACAACATCATTGACAGCGTGTTTATCGGTCACGGCGTGGGGCCTCTGGCCC
TGTCCGGCCTGGCCGTCACCTTCCCCATCATGAACCTGACTTTCGCCCTGGGCACGCTGGTAGGCATCGGCGGGGCGGCC
ATCAGCTCCATCCGGCTGGGAAGAAAAGACCAGGAAGGAACTGAGCGTACGCTTGGCAACGTCCTCATCATGAGTCTGAT
TGCCGCTGTGGTGCTGGTGATTCCCACGCTTCTTTTCCTTACGGAAATCCTGACCGCCTTCGGCGCCAGCGGGCAAACCC
TCACCTATGCGTACGACTTCATGCTTATTACCTTGCTGGGCCTGCCCGTCACGTACGTCTTCTTCAACCTCAATCATGTG
ATGAGAGCTACCGGCTACCCTAAAAAAGCCATGGGCTCCACCCTTCTTTCCGTAGGAATCAACATCATTCTGGCTCCCAT
CTTCATCTTCTGGTTCAAATGGGGCATTACCGGAGCAGCCGTGGCCACCCTTCTCGCCCAGGTCGTCGGCATGGTGCGCG
TGCTGTTACACTTTTCCGATGCGGCCAGCACGGTCCACTTCCGCCGCGGCATCTGGCAGCTGCGCAAGACCATCGTCACC
GGCATCCTGTCCATCGGGATGGCTCCCTGCCTGGTAAACGTCTGCGGCAGCGCGGTCACCGTCGCCATCAACAGGCAACT
TGCGGATCACGGGGGGGACCTGGCCATCGGGGCCTACGGCATCATCAACCGCATTCTTATTCTGTTCGCCATGCTCGTCA
TCGGCCTCACTCAGGGAATGCAGCCCATCATCGGCTACAACCACGGAGCCATGAAGCCGGGCCGCGTTCTGCTCACCCTT
AAATACGGAGTTCTGGCAGGGACATCCTTCACCACGCTGGGATTCCTGGCCTGCGTCTTCTTTCCCCGCGGCATTGCCGG
GCTCTTCACGGATGACGCCTCGCTCATCAGCCTGGCGGCCAACGGTCTGATCATCTGCGTGCTGGCCTTTCCGCTCATCG
GCAGCCAGATCATCATCGGGAACTTCTTCCAGGCCATTGGAAAAGCCCGTCTGGCAATCTTCCTGTCCCTGACGCGCCAA
ATGCTCTTCCTCCTGCCGTTCCTGCTGGTCCTGCCCCGTTTCTGGGGACAGGACGGAGTCTGGGCATCCCTTCCTCTGGC
AGACGTGCTTTCCTTTATCGTCACCCTGCTCTTCATCCGCCGGTTCCTGAAATACTACCGGCTGAAAAACAGGCACTACC
TGGTTCCCGGCACGGGAAAGGCATAA

Upstream 100 bases:

>100_bases
AAACTGGGGGAAAAAGGCCGTTTTCCGGACAGGTGGACAGCTTGACAACCCATCCGTGCGTTTTTATAGTTTGCCACCTG
TTTTGAAAGGAGGAACGTCC

Downstream 100 bases:

>100_bases
CCTTTCTCCCCACCTGTCTTACTTACACGAACCCTCGTTCCCGGCCCATTCTTTCCGGGGTGCGGCAGGGGGGAGTGAAA
CCGCTTTTTCCCATCCTTCG

Product: MATE efflux family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MAAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVTFPIMNLTFALGTLVGIGGAA
ISSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFLTEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHV
MRATGYPKKAMGSTLLSVGINIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVT
GILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGMQPIIGYNHGAMKPGRVLLTL
KYGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAANGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQ
MLFLLPFLLVLPRFWGQDGVWASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA

Sequences:

>Translated_461_residues
MAAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVTFPIMNLTFALGTLVGIGGAA
ISSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFLTEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHV
MRATGYPKKAMGSTLLSVGINIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVT
GILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGMQPIIGYNHGAMKPGRVLLTL
KYGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAANGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQ
MLFLLPFLLVLPRFWGQDGVWASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA
>Mature_460_residues
AAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVTFPIMNLTFALGTLVGIGGAAI
SSIRLGRKDQEGTERTLGNVLIMSLIAAVVLVIPTLLFLTEILTAFGASGQTLTYAYDFMLITLLGLPVTYVFFNLNHVM
RATGYPKKAMGSTLLSVGINIILAPIFIFWFKWGITGAAVATLLAQVVGMVRVLLHFSDAASTVHFRRGIWQLRKTIVTG
ILSIGMAPCLVNVCGSAVTVAINRQLADHGGDLAIGAYGIINRILILFAMLVIGLTQGMQPIIGYNHGAMKPGRVLLTLK
YGVLAGTSFTTLGFLACVFFPRGIAGLFTDDASLISLAANGLIICVLAFPLIGSQIIIGNFFQAIGKARLAIFLSLTRQM
LFLLPFLLVLPRFWGQDGVWASLPLADVLSFIVTLLFIRRFLKYYRLKNRHYLVPGTGKA

Specific function: Multidrug resistance efflux protein [H]

COG id: COG0534

COG function: function code V; Na+-driven multidrug efflux pump

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MepA subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR015522 [H]

Pfam domain/function: PF01554 MatE [H]

EC number: NA

Molecular weight: Translated: 49731; Mature: 49600

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
>Mature Secondary Structure 
AAQSRNIAELENASVWRLLIQYSLPSIAGMVVYSLYNIIDSVFIGHGVGPLALSGLAVT
CCCCCCHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH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EECCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA