Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187736117

Identifier: 187736117

GI number: 187736117

Start: 1962245

End: 1962706

Strand: Direct

Name: 187736117

Synonym: Amuc_1628

Alternate gene names: NA

Gene position: 1962245-1962706 (Clockwise)

Preceding gene: 187736116

Following gene: 187736118

Centisome position: 73.66

GC content: 47.84

Gene sequence:

>462_bases
ATGGCGCGAGTCATCTATGCGGAAGCCGATACGAAGGGTGCCGAGATAAGGACGAGTGCATTGGTGATGTTGAATCGTCC
CGGCAGCACGAAAGGGAATGCTTATCGAAATCCCTTGTTGAGTATATTGACGGAATTTGGCGAAATCAAAGACGGTAAGA
ATCCTGATTGGGCCTCCGTAATAAATCAGCAATATGCCAAGGTTGAAGTGGATGAGTACAGGGATATTGACAGGCTGAGC
TGTGAAAAACTGGAAGAAGCCAGAAAGGCGCTCCTTGAGGTTCTGAGCGGTGGCGTGACTGTTCCTTATGATGAATTTAG
AACGGCAGTCACTACTCCCACGCCTCATGTCACTATTGGCGGAACTGACTTTTTGACTGAAAAGCAGTATCGGAACTGTA
TTGTCAAACCAGACGGATGCGATAGTTTGTCTGTCTGGCCCGGTGGACCTTTGGATAGATAA

Upstream 100 bases:

>100_bases
ATGTAGAAGATCGTACTGACACTTGGAAAGGATACATTAGAGTAGAAAAAGCAGAACGGCATTATTTCCTCATCGACGGA
GACGATGTTATGACTCTCCA

Downstream 100 bases:

>100_bases
ATCATTCTGAAGCATCATCAGGCGGATCAGGTGATTGAGACTTGAGCCGTCTTTTTGACGAAGTAATATCTGGAGGATGA
ATGCCTCTCTTAAAACGCTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASVINQQYAKVEVDEYRDIDRLS
CEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIGGTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR

Sequences:

>Translated_153_residues
MARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASVINQQYAKVEVDEYRDIDRLS
CEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIGGTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR
>Mature_152_residues
ARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASVINQQYAKVEVDEYRDIDRLSC
EKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIGGTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16936; Mature: 16805

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASV
CCEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
INQQYAKVEVDEYRDIDRLSCEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIG
HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCEEEEC
GTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR
CCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARVIYAEADTKGAEIRTSALVMLNRPGSTKGNAYRNPLLSILTEFGEIKDGKNPDWASV
CEEEEECCCCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHH
INQQYAKVEVDEYRDIDRLSCEKLEEARKALLEVLSGGVTVPYDEFRTAVTTPTPHVTIG
HHHHHHEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHEECCCCCEEEEC
GTDFLTEKQYRNCIVKPDGCDSLSVWPGGPLDR
CCHHHHHHHHCCEECCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA