Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is cysK [H]
Identifier: 187735794
GI number: 187735794
Start: 1577395
End: 1578324
Strand: Reverse
Name: cysK [H]
Synonym: Amuc_1301
Alternate gene names: 187735794
Gene position: 1578324-1577395 (Counterclockwise)
Preceding gene: 187735795
Following gene: 187735793
Centisome position: 59.24
GC content: 51.94
Gene sequence:
>930_bases ATGAACATTTACACCTCCATATCGGAACTGGTCGGGAAAACACCTCTTCTGGAGCCAAGGAATTATGCTCAGGCACATCG TCTGAATGCCCGGCTCCTGCTCAAGCTGGACCACTTGAACCCGGCAGGCAGCATGAAAGACCGTATCGCACTCGCCATGA TCAACGAGGCAGAAGCATCGGGCCAACTCAAATCGGGATCTGTCATCATTGAACCAACCAGCGGCAACACGGGCATTGGC CTGGCGGCTATTGCTGCTTCCCGGGGATACCGCATCATTCTTACCATGCCGGAAAGCATGAGCGTTGAACGACGAAATAT TCTAAAAGCCTACGGAGCCGATATTGTCCTTACAGAAGACAGCCAAGGAATGAAAGGAGCCATCGCCAAAGCCCAGGATC TGGCGGCCACAACTCCGGGCTCCTTCATTCCCAGTCAATTCACCAACCCAACCAATCCCAGAGCCCACTATGAAACAACA GGGGTTGAAATATGGGAAGATACGGACGGAGAAGTAGATATCGTCGTAGCCGGAGTAGGCACCGGGGGAACAATAACCGG CATAGGCAGACTGCTCAAGGAACGCAAACCCGGAGGAATCACCGTCATTGCCGTGGAACCGGCAGATTCCCCCGTATTAT CCGCCGGCCAGGCCGGAAGCCATCAAATTCAAGGAATAGGAGCTGGCTTTATCCCAGAAACCCTGGATACGGATATCTAT GATGAAGTCATCACAGTTTCCAACGAAGATGCCTTTTCCACAGCTAAAGAATTGGGCGTCAAAGAAGGCATTCTAACTGG GATTTCCAGCGGAGCTGCCCTATGGGCTGCCGTCCAGGTTGCTAAAAGAAAAGAGAACACAGGGAAAAATGTAGTAGTGA TCCTCCCCGATTCAGCGGATCGGTACTACTCAACTCCTCTGTTCATCTGA
Upstream 100 bases:
>100_bases AATTCACATTGACACTTCCAGAATATAAGAGTAACTAATTCCTATTATTCCTATCGGAATACAAAAGAAATCTAAATCCA TCCCTGTAAAGTACGACACG
Downstream 100 bases:
>100_bases CATCCCGTTCTTTTCTACCGGATACGGCTATCCACCTTCAACCAGCGCCAACATTCATGAACGCTCATTCCCCAACCGCT ACAGACACGTTGCGACAAGC
Product: cysteine synthase A
Products: NA
Alternate protein names: OAS sulfhydrylase; OASS; Cysteine synthase A; CSase A; O-acetylserine (thiol)-lyase A; OAS-TL A; O-acetylserine-specific cysteine synthase; Sulfide-dependent cysteine synthase [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MNIYTSISELVGKTPLLEPRNYAQAHRLNARLLLKLDHLNPAGSMKDRIALAMINEAEASGQLKSGSVIIEPTSGNTGIG LAAIAASRGYRIILTMPESMSVERRNILKAYGADIVLTEDSQGMKGAIAKAQDLAATTPGSFIPSQFTNPTNPRAHYETT GVEIWEDTDGEVDIVVAGVGTGGTITGIGRLLKERKPGGITVIAVEPADSPVLSAGQAGSHQIQGIGAGFIPETLDTDIY DEVITVSNEDAFSTAKELGVKEGILTGISSGAALWAAVQVAKRKENTGKNVVVILPDSADRYYSTPLFI
Sequences:
>Translated_309_residues MNIYTSISELVGKTPLLEPRNYAQAHRLNARLLLKLDHLNPAGSMKDRIALAMINEAEASGQLKSGSVIIEPTSGNTGIG LAAIAASRGYRIILTMPESMSVERRNILKAYGADIVLTEDSQGMKGAIAKAQDLAATTPGSFIPSQFTNPTNPRAHYETT GVEIWEDTDGEVDIVVAGVGTGGTITGIGRLLKERKPGGITVIAVEPADSPVLSAGQAGSHQIQGIGAGFIPETLDTDIY DEVITVSNEDAFSTAKELGVKEGILTGISSGAALWAAVQVAKRKENTGKNVVVILPDSADRYYSTPLFI >Mature_309_residues MNIYTSISELVGKTPLLEPRNYAQAHRLNARLLLKLDHLNPAGSMKDRIALAMINEAEASGQLKSGSVIIEPTSGNTGIG LAAIAASRGYRIILTMPESMSVERRNILKAYGADIVLTEDSQGMKGAIAKAQDLAATTPGSFIPSQFTNPTNPRAHYETT GVEIWEDTDGEVDIVVAGVGTGGTITGIGRLLKERKPGGITVIAVEPADSPVLSAGQAGSHQIQGIGAGFIPETLDTDIY DEVITVSNEDAFSTAKELGVKEGILTGISSGAALWAAVQVAKRKENTGKNVVVILPDSADRYYSTPLFI
Specific function: Catalyzes the conversion of O-acetylserine (OAS) to cysteine through the elimination of acetate and addition of hydrogen sulfide [H]
COG id: COG0031
COG function: function code E; Cysteine synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cysteine synthase/cystathionine beta- synthase family [H]
Homologues:
Organism=Homo sapiens, GI295821202, Length=314, Percent_Identity=42.6751592356688, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI295821200, Length=314, Percent_Identity=42.6751592356688, Blast_Score=234, Evalue=9e-62, Organism=Homo sapiens, GI4557415, Length=314, Percent_Identity=42.6751592356688, Blast_Score=234, Evalue=9e-62, Organism=Escherichia coli, GI1788754, Length=316, Percent_Identity=51.8987341772152, Blast_Score=285, Evalue=3e-78, Organism=Escherichia coli, GI2367138, Length=305, Percent_Identity=42.2950819672131, Blast_Score=230, Evalue=8e-62, Organism=Caenorhabditis elegans, GI17535051, Length=301, Percent_Identity=49.8338870431894, Blast_Score=298, Evalue=3e-81, Organism=Caenorhabditis elegans, GI17562970, Length=299, Percent_Identity=47.4916387959866, Blast_Score=283, Evalue=5e-77, Organism=Caenorhabditis elegans, GI115535073, Length=300, Percent_Identity=52.6666666666667, Blast_Score=281, Evalue=3e-76, Organism=Caenorhabditis elegans, GI32566674, Length=293, Percent_Identity=47.7815699658703, Blast_Score=277, Evalue=6e-75, Organism=Caenorhabditis elegans, GI17561720, Length=299, Percent_Identity=47.8260869565217, Blast_Score=255, Evalue=2e-68, Organism=Caenorhabditis elegans, GI32566672, Length=213, Percent_Identity=47.4178403755869, Blast_Score=209, Evalue=2e-54, Organism=Caenorhabditis elegans, GI17534315, Length=315, Percent_Identity=41.2698412698413, Blast_Score=187, Evalue=4e-48, Organism=Caenorhabditis elegans, GI25147552, Length=317, Percent_Identity=38.4858044164038, Blast_Score=174, Evalue=4e-44, Organism=Caenorhabditis elegans, GI17561716, Length=119, Percent_Identity=46.218487394958, Blast_Score=98, Evalue=6e-21, Organism=Caenorhabditis elegans, GI71996324, Length=317, Percent_Identity=25.5520504731861, Blast_Score=65, Evalue=4e-11, Organism=Saccharomyces cerevisiae, GI6321594, Length=313, Percent_Identity=40.5750798722045, Blast_Score=198, Evalue=7e-52, Organism=Saccharomyces cerevisiae, GI6321449, Length=327, Percent_Identity=34.5565749235474, Blast_Score=142, Evalue=6e-35, Organism=Drosophila melanogaster, GI24643623, Length=311, Percent_Identity=39.5498392282958, Blast_Score=199, Evalue=2e-51, Organism=Drosophila melanogaster, GI20129101, Length=311, Percent_Identity=39.5498392282958, Blast_Score=199, Evalue=2e-51,
Paralogues:
None
Copy number: 2820 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001216 - InterPro: IPR005856 - InterPro: IPR005859 - InterPro: IPR001926 [H]
Pfam domain/function: PF00291 PALP [H]
EC number: =2.5.1.47 [H]
Molecular weight: Translated: 32558; Mature: 32558
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIYTSISELVGKTPLLEPRNYAQAHRLNARLLLKLDHLNPAGSMKDRIALAMINEAEAS CCHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCCHHEEEEEEEECCCCC GQLKSGSVIIEPTSGNTGIGLAAIAASRGYRIILTMPESMSVERRNILKAYGADIVLTED CCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECC SQGMKGAIAKAQDLAATTPGSFIPSQFTNPTNPRAHYETTGVEIWEDTDGEVDIVVAGVG CCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEECCEEEEECCCCCEEEEEEECC TGGTITGIGRLLKERKPGGITVIAVEPADSPVLSAGQAGSHQIQGIGAGFIPETLDTDIY CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHH DEVITVSNEDAFSTAKELGVKEGILTGISSGAALWAAVQVAKRKENTGKNVVVILPDSAD HHEEEECCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC RYYSTPLFI CEECCCCCC >Mature Secondary Structure MNIYTSISELVGKTPLLEPRNYAQAHRLNARLLLKLDHLNPAGSMKDRIALAMINEAEAS CCHHHHHHHHHCCCCCCCCCCHHHHHHCCEEEEEEEECCCCCCCCHHEEEEEEEECCCCC GQLKSGSVIIEPTSGNTGIGLAAIAASRGYRIILTMPESMSVERRNILKAYGADIVLTED CCCCCCCEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEECC SQGMKGAIAKAQDLAATTPGSFIPSQFTNPTNPRAHYETTGVEIWEDTDGEVDIVVAGVG CCCCHHHHHHHHHHHCCCCCCCCCHHCCCCCCCCCEEEECCEEEEECCCCCEEEEEEECC TGGTITGIGRLLKERKPGGITVIAVEPADSPVLSAGQAGSHQIQGIGAGFIPETLDTDIY CCCHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHH DEVITVSNEDAFSTAKELGVKEGILTGISSGAALWAAVQVAKRKENTGKNVVVILPDSAD HHEEEECCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCC RYYSTPLFI CEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]