Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is cysH [H]
Identifier: 187735793
GI number: 187735793
Start: 1576655
End: 1577338
Strand: Reverse
Name: cysH [H]
Synonym: Amuc_1300
Alternate gene names: 187735793
Gene position: 1577338-1576655 (Counterclockwise)
Preceding gene: 187735794
Following gene: 187735792
Centisome position: 59.21
GC content: 51.32
Gene sequence:
>684_bases ATGAACGCTCATTCCCCAACCGCTACAGACACGTTGCGACAAGCCGCAGCGCAATACGAAGGAAACCTTGTTTTTGCCAC ATCATTCGGGGCAGAAGACCAAGTGCTTACCCATATGATCTCCCATCTTGGCCTGAATATTCCTCTGGCGACTCTGGACA CGGGGCGATTATTTCCGGAAACCTATGAACTCTGGACAAGAACGGAGGAAATATACGGCATTCGCATTATTCCTTATTTT CCGGCAGCGGAAGAAGTGGAAAGCATGATTCTGGACAAAGGTGTCAATCTGTTCCGCAACAGTGTGGAATACCGTCACGA ATGCTGCAATATCCGTAAACTGCGCCCTCTGGAAAGACTCCTTGCCGGGAAAAAAGCGTGGATCTGCGGATTACGCTCCA CTCAGTCCATCACCCGGAAAGGGCTTCATATCACAGAAAACGATGAGGCGAACGGCATCATCAAAATCAGCCCACTGGCC AACTGGTCAGAAGAGGATGTCTGGAACTATATCCGCGCCTACGGCGTTCCCTACAATCCCCTTCACGATGCAGGATTCCC CAGTATCGGGTGCGCCTGCTGCACAAGAGCTGTCAAGAGGACAGAAGATGTACGCGACGGACGATGGTGGTGGGAAGAGA AAGAACACAAGGAGTGCGGTCTACACCGCAAACCAAGACATTGA
Upstream 100 bases:
>100_bases CCGATTCAGCGGATCGGTACTACTCAACTCCTCTGTTCATCTGACATCCCGTTCTTTTCTACCGGATACGGCTATCCACC TTCAACCAGCGCCAACATTC
Downstream 100 bases:
>100_bases TAACCAAAAATATACAAAATGAACAGCATTTACAGACTCAGCCAGCTAAAACAGTTGGAGGCAGAAAGCATTCACATTTT CCGGGATGCCATCAGCCAGT
Product: adenylylsulfate reductase, thioredoxin dependent
Products: NA
Alternate protein names: 3'-phosphoadenylylsulfate reductase; PAPS reductase, thioredoxin dependent; PAPS sulfotransferase; PAdoPS reductase [H]
Number of amino acids: Translated: 227; Mature: 227
Protein sequence:
>227_residues MNAHSPTATDTLRQAAAQYEGNLVFATSFGAEDQVLTHMISHLGLNIPLATLDTGRLFPETYELWTRTEEIYGIRIIPYF PAAEEVESMILDKGVNLFRNSVEYRHECCNIRKLRPLERLLAGKKAWICGLRSTQSITRKGLHITENDEANGIIKISPLA NWSEEDVWNYIRAYGVPYNPLHDAGFPSIGCACCTRAVKRTEDVRDGRWWWEEKEHKECGLHRKPRH
Sequences:
>Translated_227_residues MNAHSPTATDTLRQAAAQYEGNLVFATSFGAEDQVLTHMISHLGLNIPLATLDTGRLFPETYELWTRTEEIYGIRIIPYF PAAEEVESMILDKGVNLFRNSVEYRHECCNIRKLRPLERLLAGKKAWICGLRSTQSITRKGLHITENDEANGIIKISPLA NWSEEDVWNYIRAYGVPYNPLHDAGFPSIGCACCTRAVKRTEDVRDGRWWWEEKEHKECGLHRKPRH >Mature_227_residues MNAHSPTATDTLRQAAAQYEGNLVFATSFGAEDQVLTHMISHLGLNIPLATLDTGRLFPETYELWTRTEEIYGIRIIPYF PAAEEVESMILDKGVNLFRNSVEYRHECCNIRKLRPLERLLAGKKAWICGLRSTQSITRKGLHITENDEANGIIKISPLA NWSEEDVWNYIRAYGVPYNPLHDAGFPSIGCACCTRAVKRTEDVRDGRWWWEEKEHKECGLHRKPRH
Specific function: Reduction of activated sulfate into sulfite [H]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysH subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789121, Length=204, Percent_Identity=28.4313725490196, Blast_Score=90, Evalue=1e-19, Organism=Saccharomyces cerevisiae, GI6325425, Length=214, Percent_Identity=35.5140186915888, Blast_Score=95, Evalue=8e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011798 - InterPro: IPR004511 - InterPro: IPR002500 - InterPro: IPR014729 [H]
Pfam domain/function: PF01507 PAPS_reduct [H]
EC number: =1.8.4.8 [H]
Molecular weight: Translated: 26025; Mature: 26025
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHSPTATDTLRQAAAQYEGNLVFATSFGAEDQVLTHMISHLGLNIPLATLDTGRLFPE CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHH TYELWTRTEEIYGIRIIPYFPAAEEVESMILDKGVNLFRNSVEYRHECCNIRKLRPLERL HHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHH LAGKKAWICGLRSTQSITRKGLHITENDEANGIIKISPLANWSEEDVWNYIRAYGVPYNP HCCCHHEEECCCCHHHHHHCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCC LHDAGFPSIGCACCTRAVKRTEDVRDGRWWWEEKEHKECGLHRKPRH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCC >Mature Secondary Structure MNAHSPTATDTLRQAAAQYEGNLVFATSFGAEDQVLTHMISHLGLNIPLATLDTGRLFPE CCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCCCEEECCCCCCCHH TYELWTRTEEIYGIRIIPYFPAAEEVESMILDKGVNLFRNSVEYRHECCNIRKLRPLERL HHHHHHHHHHHEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHH LAGKKAWICGLRSTQSITRKGLHITENDEANGIIKISPLANWSEEDVWNYIRAYGVPYNP HCCCHHEEECCCCHHHHHHCCCEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCC LHDAGFPSIGCACCTRAVKRTEDVRDGRWWWEEKEHKECGLHRKPRH CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10464198; 11481430 [H]