Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is phoU [H]
Identifier: 187735795
GI number: 187735795
Start: 1578998
End: 1579672
Strand: Reverse
Name: phoU [H]
Synonym: Amuc_1302
Alternate gene names: 187735795
Gene position: 1579672-1578998 (Counterclockwise)
Preceding gene: 187735796
Following gene: 187735794
Centisome position: 59.29
GC content: 58.07
Gene sequence:
>675_bases ATGACATCCCCCGGCAATCACATCCTCCCCCACTACGACGCGGCCCTGAACGCTATCCGCCTCCGCGTCAATGCCATCTG CGGCAGCCTGCTGAAATACATGGACATTCTGGAACGGGTCATTTCCGGCCCGGACAGCGACGGGGCCAACAGCATCATTG CGGACAGCGACCCGCTGCAGGAAGAAACCCGGCAGGTTCTCTCCCTCTGCTCCTCCGTACTCACCCAGTTCCATCCACTG GGACGCGACCTGAGGCTCGTCATCACTTTCTCCCGATGCGGGGACAAGCTCCAGGAATGCATGGAGGAAGTAACGGGTAT CGCCAAGCATGCCAAGTCCTCCATCAGGCATCAGGAATCCTTCTCCCCGGATATTGTGCTCCCTCTGCTGGAAATGGCCG TATCCGAATTCAGAGACGCCGCCAGGTGTCTGGAAACGCAGGATGTGGACGCCGCCAGGGAAATACGCCTGCGCGACAAA AAACTGGACAAAGCCCATCGCAAAGCGCTGGCCCTTCTGGTCTCCCCCGAACGGGAGGACTCCCCTTCCCTCAACGTCAA CCTTCTCTTCATTATCCGTTCTCTGGAACGGATAGGAGACATTGCCAAAACCATCGCCGCCACCGTCGTCTTCCTGAAGG AAGCCACGGATATCCGCCACGGAAAAGAAAGATAA
Upstream 100 bases:
>100_bases GGGGAAACGTCCCAAATCTTCACCAATCCTACGGAAAAAGAAACGGAAGCCTACATTACGGGCCGTTTCAGCTAAAAGCC CATTCCAAACCATTCTCCTC
Downstream 100 bases:
>100_bases AACCATTCCTGCCCGCACGGCGATTCCCTGTTTCCCGTACCGAAAAAATATCCGGAGTAATCATCATAGCCGAGGGAGAA GATGAAACCGTCATGCAGGA
Product: phosphate uptake regulator, PhoU
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTSPGNHILPHYDAALNAIRLRVNAICGSLLKYMDILERVISGPDSDGANSIIADSDPLQEETRQVLSLCSSVLTQFHPL GRDLRLVITFSRCGDKLQECMEEVTGIAKHAKSSIRHQESFSPDIVLPLLEMAVSEFRDAARCLETQDVDAAREIRLRDK KLDKAHRKALALLVSPEREDSPSLNVNLLFIIRSLERIGDIAKTIAATVVFLKEATDIRHGKER
Sequences:
>Translated_224_residues MTSPGNHILPHYDAALNAIRLRVNAICGSLLKYMDILERVISGPDSDGANSIIADSDPLQEETRQVLSLCSSVLTQFHPL GRDLRLVITFSRCGDKLQECMEEVTGIAKHAKSSIRHQESFSPDIVLPLLEMAVSEFRDAARCLETQDVDAAREIRLRDK KLDKAHRKALALLVSPEREDSPSLNVNLLFIIRSLERIGDIAKTIAATVVFLKEATDIRHGKER >Mature_223_residues TSPGNHILPHYDAALNAIRLRVNAICGSLLKYMDILERVISGPDSDGANSIIADSDPLQEETRQVLSLCSSVLTQFHPLG RDLRLVITFSRCGDKLQECMEEVTGIAKHAKSSIRHQESFSPDIVLPLLEMAVSEFRDAARCLETQDVDAAREIRLRDKK LDKAHRKALALLVSPEREDSPSLNVNLLFIIRSLERIGDIAKTIAATVVFLKEATDIRHGKER
Specific function: Not known; probably involved in phosphate transport and/or metabolism [H]
COG id: COG0704
COG function: function code P; Phosphate uptake regulator
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phoU family [H]
Homologues:
Organism=Escherichia coli, GI1790161, Length=221, Percent_Identity=26.6968325791855, Blast_Score=64, Evalue=9e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008170 [H]
Pfam domain/function: PF01895 PhoU [H]
EC number: NA
Molecular weight: Translated: 24949; Mature: 24818
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSPGNHILPHYDAALNAIRLRVNAICGSLLKYMDILERVISGPDSDGANSIIADSDPLQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH EETRQVLSLCSSVLTQFHPLGRDLRLVITFSRCGDKLQECMEEVTGIAKHAKSSIRHQES HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FSPDIVLPLLEMAVSEFRDAARCLETQDVDAAREIRLRDKKLDKAHRKALALLVSPERED CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SPSLNVNLLFIIRSLERIGDIAKTIAATVVFLKEATDIRHGKER CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TSPGNHILPHYDAALNAIRLRVNAICGSLLKYMDILERVISGPDSDGANSIIADSDPLQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHH EETRQVLSLCSSVLTQFHPLGRDLRLVITFSRCGDKLQECMEEVTGIAKHAKSSIRHQES HHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC FSPDIVLPLLEMAVSEFRDAARCLETQDVDAAREIRLRDKKLDKAHRKALALLVSPERED CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC SPSLNVNLLFIIRSLERIGDIAKTIAATVVFLKEATDIRHGKER CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA