Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
---|---|
Accession | NC_010655 |
Length | 2,664,102 |
Click here to switch to the map view.
The map label for this gene is cysD
Identifier: 187735792
GI number: 187735792
Start: 1575725
End: 1576636
Strand: Reverse
Name: cysD
Synonym: Amuc_1299
Alternate gene names: 187735792
Gene position: 1576636-1575725 (Counterclockwise)
Preceding gene: 187735793
Following gene: 187735791
Centisome position: 59.18
GC content: 47.15
Gene sequence:
>912_bases ATGAACAGCATTTACAGACTCAGCCAGCTAAAACAGTTGGAGGCAGAAAGCATTCACATTTTCCGGGATGCCATCAGCCA GTTTGAAAATCCCGTACTTCTTTATTCCATCGGGAAAGATTCCTCTGTACTGGTCCACTTAGCCAAAAAGGCATTCTATC CAGGCAGACTCCCATTCAAGCTTCTTCATATAGACTCCACATTCAAATTTCGCGAGATGATAGAATTCCGGGACAGATTC GTTCAGGAAAATGATCTGGATCTGATTGTCCACAGTAACCAGGAAGGCATTTCCGCCGGCGTCAATCCTTTTACTTACGG CAGCCGCAAATACACGGATATTATGAAAACACAGGCATTGATTCAGGCGTTGACCGCAGGAAAATATGATGCCGTATTCG GAGGCGCCCGCCGCGACGAAGAAAAATCACGGGCCAAAGAACGAATTTTCTCTTTCCGGGATAAATTCAACCAATGGGAT CCCAAAAATCAACGGCCGGAATTATGGAACATTTATAACGGCCGTATCAATCCGGGAGAAAGCGTCCGTATTTTTCCTCT GTCCAATTGGACGGAACTGGATATCTGGCAATACATCCGCCTGGAAAAAATACAGGTTGTAGACCTGTATTTTGCTAGAC CCCGTCCCATTGTGGAACGTGACGGCTCCCTTATTATGGCGGACGACGACCGCCTGCCTTTGAAACCGGGGGAAACACCG CAGATGAGAACCGTCCGTTTCCGTACACTGGGCTGTTACCCTCTAACTGGAGCCATAGAATCTACAGCTCGCACTGTAGA AGAGATTGTAGCGGAAATGCTGGAAACCAGGCTGAGCGAGCGTTCTTCTCGTATAATTGACCACGACGGTGATGCCTCCA TGGAACAGAAAAAACGAGAAGGATATTTTTAA
Upstream 100 bases:
>100_bases AGAAGATGTACGCGACGGACGATGGTGGTGGGAAGAGAAAGAACACAAGGAGTGCGGTCTACACCGCAAACCAAGACATT GATAACCAAAAATATACAAA
Downstream 100 bases:
>100_bases CCCCTATTATGAACCATTCTGACGATACCTCTTATTTTTACCATTATGGACATCGACTCATACCTGAACGAACACGAAAA TAAAAGCCTGCTACGCGTAC
Product: sulfate adenylyltransferase subunit 2
Products: NA
Alternate protein names: ATP-sulfurylase small subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MNSIYRLSQLKQLEAESIHIFRDAISQFENPVLLYSIGKDSSVLVHLAKKAFYPGRLPFKLLHIDSTFKFREMIEFRDRF VQENDLDLIVHSNQEGISAGVNPFTYGSRKYTDIMKTQALIQALTAGKYDAVFGGARRDEEKSRAKERIFSFRDKFNQWD PKNQRPELWNIYNGRINPGESVRIFPLSNWTELDIWQYIRLEKIQVVDLYFARPRPIVERDGSLIMADDDRLPLKPGETP QMRTVRFRTLGCYPLTGAIESTARTVEEIVAEMLETRLSERSSRIIDHDGDASMEQKKREGYF
Sequences:
>Translated_303_residues MNSIYRLSQLKQLEAESIHIFRDAISQFENPVLLYSIGKDSSVLVHLAKKAFYPGRLPFKLLHIDSTFKFREMIEFRDRF VQENDLDLIVHSNQEGISAGVNPFTYGSRKYTDIMKTQALIQALTAGKYDAVFGGARRDEEKSRAKERIFSFRDKFNQWD PKNQRPELWNIYNGRINPGESVRIFPLSNWTELDIWQYIRLEKIQVVDLYFARPRPIVERDGSLIMADDDRLPLKPGETP QMRTVRFRTLGCYPLTGAIESTARTVEEIVAEMLETRLSERSSRIIDHDGDASMEQKKREGYF >Mature_303_residues MNSIYRLSQLKQLEAESIHIFRDAISQFENPVLLYSIGKDSSVLVHLAKKAFYPGRLPFKLLHIDSTFKFREMIEFRDRF VQENDLDLIVHSNQEGISAGVNPFTYGSRKYTDIMKTQALIQALTAGKYDAVFGGARRDEEKSRAKERIFSFRDKFNQWD PKNQRPELWNIYNGRINPGESVRIFPLSNWTELDIWQYIRLEKIQVVDLYFARPRPIVERDGSLIMADDDRLPLKPGETP QMRTVRFRTLGCYPLTGAIESTARTVEEIVAEMLETRLSERSSRIIDHDGDASMEQKKREGYF
Specific function: First step in the sulfate activation pathway. This reaction occurs early in the reductive branch of the cysteine biosynthetic pathway. [C]
COG id: COG0175
COG function: function code EH; 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAPS reductase family. CysD subfamily
Homologues:
Organism=Escherichia coli, GI1789109, Length=298, Percent_Identity=65.4362416107383, Blast_Score=424, Evalue=1e-120,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSD_AKKM8 (B2URN8)
Other databases:
- EMBL: CP001071 - RefSeq: YP_001877904.1 - ProteinModelPortal: B2URN8 - SMR: B2URN8 - GeneID: 6275588 - GenomeReviews: CP001071_GR - KEGG: amu:Amuc_1299 - HOGENOM: HBG758022 - OMA: HYGFDAA - ProtClustDB: PRK05253 - HAMAP: MF_00064 - InterPro: IPR002500 - InterPro: IPR014729 - InterPro: IPR011784 - Gene3D: G3DSA:3.40.50.620 - PIRSF: PIRSF002936 - TIGRFAMs: TIGR02039
Pfam domain/function: PF01507 PAPS_reduct
EC number: =2.7.7.4
Molecular weight: Translated: 35311; Mature: 35311
Theoretical pI: Translated: 8.37; Mature: 8.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSIYRLSQLKQLEAESIHIFRDAISQFENPVLLYSIGKDSSVLVHLAKKAFYPGRLPFK CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEE LLHIDSTFKFREMIEFRDRFVQENDLDLIVHSNQEGISAGVNPFTYGSRKYTDIMKTQAL EEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHH IQALTAGKYDAVFGGARRDEEKSRAKERIFSFRDKFNQWDPKNQRPELWNIYNGRINPGE HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC SVRIFPLSNWTELDIWQYIRLEKIQVVDLYFARPRPIVERDGSLIMADDDRLPLKPGETP CEEEEECCCCCCCHHHHHHHHCEEEEEEEEECCCCCHHCCCCCEEEECCCCCCCCCCCCC QMRTVRFRTLGCYPLTGAIESTARTVEEIVAEMLETRLSERSSRIIDHDGDASMEQKKRE CEEEEEEEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC GYF CCC >Mature Secondary Structure MNSIYRLSQLKQLEAESIHIFRDAISQFENPVLLYSIGKDSSVLVHLAKKAFYPGRLPFK CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCEE LLHIDSTFKFREMIEFRDRFVQENDLDLIVHSNQEGISAGVNPFTYGSRKYTDIMKTQAL EEEECCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHCCCCCCCCCCCHHHHHHHHHHH IQALTAGKYDAVFGGARRDEEKSRAKERIFSFRDKFNQWDPKNQRPELWNIYNGRINPGE HHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCC SVRIFPLSNWTELDIWQYIRLEKIQVVDLYFARPRPIVERDGSLIMADDDRLPLKPGETP CEEEEECCCCCCCHHHHHHHHCEEEEEEEEECCCCCHHCCCCCEEEECCCCCCCCCCCCC QMRTVRFRTLGCYPLTGAIESTARTVEEIVAEMLETRLSERSSRIIDHDGDASMEQKKRE CEEEEEEEEECCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHC GYF CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA