Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is cysNC [H]
Identifier: 187735791
GI number: 187735791
Start: 1573952
End: 1575679
Strand: Reverse
Name: cysNC [H]
Synonym: Amuc_1298
Alternate gene names: 187735791
Gene position: 1575679-1573952 (Counterclockwise)
Preceding gene: 187735792
Following gene: 187735790
Centisome position: 59.14
GC content: 51.56
Gene sequence:
>1728_bases ATGGACATCGACTCATACCTGAACGAACACGAAAATAAAAGCCTGCTACGCGTACTTACCTGCGGTTCCGTGGACGACGG GAAATCTACACTCATCGGACGCCTCCTTTATGACAGCAAACTGATTTTTGACGACCAGCTGGCAGAGCTGCGCAAAGCCA GTGAAAAAAATGGAACTGCTGGAGCAGGTAAAATTGATTACGCCCTGTTGCTGGACGGCCTTAGAGCGGAACGGGAACAG GGAATAACCATTGATGTAGCCTACCGGTACTTCACCACCCCACGCCGCAAATTCATCATTGCCGACTGCCCCGGACATGA ACAATACACCCGGAACATGGCCACCGGAGCTTCCACGGCAGATGCCGCCATCATCCTGATTGATGCTCGCCATGGAGTAC TCACACAAACGAAACGGCATGCGTTCATCGTCTCTCTTCTGAAAATACGGCACCTCATCGTAGCCGTCAACAAGATGGAT CTTTTGAAATACTCTGAAGAAAAATTCCGGAAAATTGAAGAAGAATTCGGAAGCTTCACGCAACAGTTGAATATCCCGGA TGTTCGTTTCGTTCCCATTTCCGCCATTGAAGGGGAAAATGTGACGCAAACAACAGGAAAAACGCCTTGGTACCAGGGCG ATCATCTGCTTTCCATTCTGGAAACGCTGGATGCCAGCGACAGCAGGAATCTCCGGGATTTCCGCTTTCCGGTACAGACA GTCATACGGCCCAATCTCGATTTCCGGGGGTTCGCCGGCTCCATTACCTCCGGCTCCATCCGCAGGGGTGATCCTATCGT GACGTTGCCTTCGTTTCAAAACAGCCGGATCAAAAGAATCGTTACTCCGGACGGAGAACTGGAAGAAGCATTCTCTCCCC AAGCCGTCGTATTGGAACTTGAGGATGAAATAGATATCAGCAGCGGTGACATGATTGTCAAAAAAGGGAATCTCCCCCAT ATAGAGGATCGGCTGGAAGCCCGTGTCATCTGGATGTCTGAAAAACCCCTTCTTCCCAGAAGCAAATACATTATGCGCCA TGCGGGCAGAAATATCCAGGGGAGGATAGTAGAACTCCAATACGACATAGACGTCAATACACTGGAAAGCCGCCATGCAA CGCAGCTTCCTCTGAATCATGTCGGCCGTATCGTCCTGGAAACCAGTTCCCCCTTGTTCTATGATTATTACCGGGATAAC CGTTCCGGAGGAGCTTTCATCCTGATTGACCCGCTGAATAACGTCACAGCGGGAGCTGGTATGCTCCGCCCCCCTCACAG AGATAAGGTTCCCGAAAAAGAAAAGGAACAACTCCAAACATTCGTTTCAAGCGATGAACGCGCTGAAACCTTCGGGCATG GTGGAAAACAAATTTACGTAGCGGGAGAAGACAGCGAACTGGCACGCAGCTTCGCCAAACAGCTGGAACGGGAACTCCAT CGGCTCAAGGCTCATACCTACGGTCTGGATTTCAAGGCAGAAGGCGTATGGGGCAGATCCGCTAGAGAAATCGTCAATGC CTCAGGCCTGCTGGCCGAAGCGGGGCTCATGAGCATTGCAGTGCTGCCGGGCCTTCCCGTCCTGCCCAGAAAAGCAAAGG GAACCTACTGCATCTGGCTTGGGAATGTCGTCTCCGCGCCAGAAACGGCAGACCGCATCCTCCCCCCTGCGAAAGCAAAC GAAAATACTGCGTTTCTTCTGGCGCGCACTCTCTATGTGGAATTTTAA
Upstream 100 bases:
>100_bases TGACCACGACGGTGATGCCTCCATGGAACAGAAAAAACGAGAAGGATATTTTTAACCCCTATTATGAACCATTCTGACGA TACCTCTTATTTTTACCATT
Downstream 100 bases:
>100_bases TTTTATCCCATTTAAATACCTGTTCTACCATTTTATGAAAACTCTGCCTCTTGCATTAGATGCTCTTCTTTGTATTGGCG CTCTCCTGGTTCCAGCATTT
Product: sulfate adenylyltransferase, large subunit
Products: NA
Alternate protein names: Sulfate adenylyltransferase subunit 1; ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT; Adenylyl-sulfate kinase; APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase [H]
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MDIDSYLNEHENKSLLRVLTCGSVDDGKSTLIGRLLYDSKLIFDDQLAELRKASEKNGTAGAGKIDYALLLDGLRAEREQ GITIDVAYRYFTTPRRKFIIADCPGHEQYTRNMATGASTADAAIILIDARHGVLTQTKRHAFIVSLLKIRHLIVAVNKMD LLKYSEEKFRKIEEEFGSFTQQLNIPDVRFVPISAIEGENVTQTTGKTPWYQGDHLLSILETLDASDSRNLRDFRFPVQT VIRPNLDFRGFAGSITSGSIRRGDPIVTLPSFQNSRIKRIVTPDGELEEAFSPQAVVLELEDEIDISSGDMIVKKGNLPH IEDRLEARVIWMSEKPLLPRSKYIMRHAGRNIQGRIVELQYDIDVNTLESRHATQLPLNHVGRIVLETSSPLFYDYYRDN RSGGAFILIDPLNNVTAGAGMLRPPHRDKVPEKEKEQLQTFVSSDERAETFGHGGKQIYVAGEDSELARSFAKQLERELH RLKAHTYGLDFKAEGVWGRSAREIVNASGLLAEAGLMSIAVLPGLPVLPRKAKGTYCIWLGNVVSAPETADRILPPAKAN ENTAFLLARTLYVEF
Sequences:
>Translated_575_residues MDIDSYLNEHENKSLLRVLTCGSVDDGKSTLIGRLLYDSKLIFDDQLAELRKASEKNGTAGAGKIDYALLLDGLRAEREQ GITIDVAYRYFTTPRRKFIIADCPGHEQYTRNMATGASTADAAIILIDARHGVLTQTKRHAFIVSLLKIRHLIVAVNKMD LLKYSEEKFRKIEEEFGSFTQQLNIPDVRFVPISAIEGENVTQTTGKTPWYQGDHLLSILETLDASDSRNLRDFRFPVQT VIRPNLDFRGFAGSITSGSIRRGDPIVTLPSFQNSRIKRIVTPDGELEEAFSPQAVVLELEDEIDISSGDMIVKKGNLPH IEDRLEARVIWMSEKPLLPRSKYIMRHAGRNIQGRIVELQYDIDVNTLESRHATQLPLNHVGRIVLETSSPLFYDYYRDN RSGGAFILIDPLNNVTAGAGMLRPPHRDKVPEKEKEQLQTFVSSDERAETFGHGGKQIYVAGEDSELARSFAKQLERELH RLKAHTYGLDFKAEGVWGRSAREIVNASGLLAEAGLMSIAVLPGLPVLPRKAKGTYCIWLGNVVSAPETADRILPPAKAN ENTAFLLARTLYVEF >Mature_575_residues MDIDSYLNEHENKSLLRVLTCGSVDDGKSTLIGRLLYDSKLIFDDQLAELRKASEKNGTAGAGKIDYALLLDGLRAEREQ GITIDVAYRYFTTPRRKFIIADCPGHEQYTRNMATGASTADAAIILIDARHGVLTQTKRHAFIVSLLKIRHLIVAVNKMD LLKYSEEKFRKIEEEFGSFTQQLNIPDVRFVPISAIEGENVTQTTGKTPWYQGDHLLSILETLDASDSRNLRDFRFPVQT VIRPNLDFRGFAGSITSGSIRRGDPIVTLPSFQNSRIKRIVTPDGELEEAFSPQAVVLELEDEIDISSGDMIVKKGNLPH IEDRLEARVIWMSEKPLLPRSKYIMRHAGRNIQGRIVELQYDIDVNTLESRHATQLPLNHVGRIVLETSSPLFYDYYRDN RSGGAFILIDPLNNVTAGAGMLRPPHRDKVPEKEKEQLQTFVSSDERAETFGHGGKQIYVAGEDSELARSFAKQLERELH RLKAHTYGLDFKAEGVWGRSAREIVNASGLLAEAGLMSIAVLPGLPVLPRKAKGTYCIWLGNVVSAPETADRILPPAKAN ENTAFLLARTLYVEF
Specific function: APS kinase catalyzes the synthesis of activated sulfate [H]
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI223555963, Length=436, Percent_Identity=28.6697247706422, Blast_Score=166, Evalue=5e-41, Organism=Homo sapiens, GI5729864, Length=436, Percent_Identity=28.6697247706422, Blast_Score=165, Evalue=9e-41, Organism=Homo sapiens, GI194018520, Length=440, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI194097354, Length=440, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI194018522, Length=440, Percent_Identity=27.2727272727273, Blast_Score=146, Evalue=6e-35, Organism=Homo sapiens, GI46094014, Length=444, Percent_Identity=26.1261261261261, Blast_Score=143, Evalue=5e-34, Organism=Homo sapiens, GI4503475, Length=331, Percent_Identity=29.9093655589124, Blast_Score=142, Evalue=6e-34, Organism=Homo sapiens, GI4503471, Length=453, Percent_Identity=27.3730684326711, Blast_Score=142, Evalue=1e-33, Organism=Homo sapiens, GI34147630, Length=345, Percent_Identity=28.1159420289855, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI1789108, Length=426, Percent_Identity=53.0516431924883, Blast_Score=451, Evalue=1e-128, Organism=Escherichia coli, GI1790412, Length=150, Percent_Identity=31.3333333333333, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI1789737, Length=150, Percent_Identity=31.3333333333333, Blast_Score=78, Evalue=2e-15, Organism=Escherichia coli, GI2367247, Length=387, Percent_Identity=24.5478036175711, Blast_Score=78, Evalue=2e-15, Organism=Caenorhabditis elegans, GI115532067, Length=316, Percent_Identity=30.6962025316456, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI115532065, Length=316, Percent_Identity=30.6962025316456, Blast_Score=164, Evalue=1e-40, Organism=Caenorhabditis elegans, GI32566629, Length=433, Percent_Identity=26.5588914549654, Blast_Score=156, Evalue=3e-38, Organism=Caenorhabditis elegans, GI17552884, Length=440, Percent_Identity=27.9545454545455, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI17569207, Length=440, Percent_Identity=27.9545454545455, Blast_Score=148, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32566303, Length=433, Percent_Identity=26.7898383371824, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI25141371, Length=257, Percent_Identity=26.8482490272374, Blast_Score=95, Evalue=8e-20, Organism=Caenorhabditis elegans, GI32566301, Length=150, Percent_Identity=34.6666666666667, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17556456, Length=345, Percent_Identity=23.1884057971014, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6325337, Length=308, Percent_Identity=33.4415584415584, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6319594, Length=308, Percent_Identity=33.4415584415584, Blast_Score=162, Evalue=1e-40, Organism=Saccharomyces cerevisiae, GI6322937, Length=400, Percent_Identity=30, Blast_Score=154, Evalue=3e-38, Organism=Saccharomyces cerevisiae, GI6320377, Length=429, Percent_Identity=27.039627039627, Blast_Score=120, Evalue=5e-28, Organism=Saccharomyces cerevisiae, GI6324761, Length=259, Percent_Identity=28.957528957529, Blast_Score=100, Evalue=7e-22, Organism=Drosophila melanogaster, GI45550900, Length=429, Percent_Identity=27.7389277389277, Blast_Score=152, Evalue=5e-37, Organism=Drosophila melanogaster, GI24652838, Length=302, Percent_Identity=31.4569536423841, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI17137572, Length=302, Percent_Identity=31.4569536423841, Blast_Score=145, Evalue=5e-35, Organism=Drosophila melanogaster, GI45553807, Length=271, Percent_Identity=32.4723247232472, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI45553816, Length=271, Percent_Identity=32.4723247232472, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI24651721, Length=271, Percent_Identity=32.4723247232472, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17864154, Length=271, Percent_Identity=32.4723247232472, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI17137380, Length=356, Percent_Identity=25.2808988764045, Blast_Score=122, Evalue=9e-28, Organism=Drosophila melanogaster, GI281363316, Length=352, Percent_Identity=27.5568181818182, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI17864358, Length=352, Percent_Identity=27.5568181818182, Blast_Score=105, Evalue=7e-23, Organism=Drosophila melanogaster, GI19921738, Length=165, Percent_Identity=31.5151515151515, Blast_Score=81, Evalue=2e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF01583 APS_kinase; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: =2.7.7.4; =2.7.1.25 [H]
Molecular weight: Translated: 64385; Mature: 64385
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDIDSYLNEHENKSLLRVLTCGSVDDGKSTLIGRLLYDSKLIFDDQLAELRKASEKNGTA CCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCC GAGKIDYALLLDGLRAEREQGITIDVAYRYFTTPRRKFIIADCPGHEQYTRNMATGASTA CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCC DAAIILIDARHGVLTQTKRHAFIVSLLKIRHLIVAVNKMDLLKYSEEKFRKIEEEFGSFT CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQLNIPDVRFVPISAIEGENVTQTTGKTPWYQGDHLLSILETLDASDSRNLRDFRFPVQT HHCCCCCEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHH VIRPNLDFRGFAGSITSGSIRRGDPIVTLPSFQNSRIKRIVTPDGELEEAFSPQAVVLEL HHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHCCCCEEEEEE EDEIDISSGDMIVKKGNLPHIEDRLEARVIWMSEKPLLPRSKYIMRHAGRNIQGRIVELQ CCCCCCCCCCEEEECCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEE YDIDVNTLESRHATQLPLNHVGRIVLETSSPLFYDYYRDNRSGGAFILIDPLNNVTAGAG EECCCCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC MLRPPHRDKVPEKEKEQLQTFVSSDERAETFGHGGKQIYVAGEDSELARSFAKQLERELH CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHH RLKAHTYGLDFKAEGVWGRSAREIVNASGLLAEAGLMSIAVLPGLPVLPRKAKGTYCIWL HHHHHHCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE GNVVSAPETADRILPPAKANENTAFLLARTLYVEF CCCCCCCCHHHHCCCCCCCCCCEEEEEEEEEEECC >Mature Secondary Structure MDIDSYLNEHENKSLLRVLTCGSVDDGKSTLIGRLLYDSKLIFDDQLAELRKASEKNGTA CCHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCC GAGKIDYALLLDGLRAEREQGITIDVAYRYFTTPRRKFIIADCPGHEQYTRNMATGASTA CCCCCCHHHHHHHHHHHHHCCCEEEEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCCCC DAAIILIDARHGVLTQTKRHAFIVSLLKIRHLIVAVNKMDLLKYSEEKFRKIEEEFGSFT CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QQLNIPDVRFVPISAIEGENVTQTTGKTPWYQGDHLLSILETLDASDSRNLRDFRFPVQT HHCCCCCEEEEEEEEECCCCCEECCCCCCCCCCHHHHHHHHHHCCCCCCCCHHHHCCHHH VIRPNLDFRGFAGSITSGSIRRGDPIVTLPSFQNSRIKRIVTPDGELEEAFSPQAVVLEL HHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEECCCCCHHHHCCCCEEEEEE EDEIDISSGDMIVKKGNLPHIEDRLEARVIWMSEKPLLPRSKYIMRHAGRNIQGRIVELQ CCCCCCCCCCEEEECCCCCCHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCEEEEEEE YDIDVNTLESRHATQLPLNHVGRIVLETSSPLFYDYYRDNRSGGAFILIDPLNNVTAGAG EECCCCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC MLRPPHRDKVPEKEKEQLQTFVSSDERAETFGHGGKQIYVAGEDSELARSFAKQLERELH CCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHHH RLKAHTYGLDFKAEGVWGRSAREIVNASGLLAEAGLMSIAVLPGLPVLPRKAKGTYCIWL HHHHHHCCCCEEECCCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEE GNVVSAPETADRILPPAKANENTAFLLARTLYVEF CCCCCCCCHHHHCCCCCCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]