Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735781
Identifier: 187735781
GI number: 187735781
Start: 1560065
End: 1560697
Strand: Direct
Name: 187735781
Synonym: Amuc_1287
Alternate gene names: NA
Gene position: 1560065-1560697 (Clockwise)
Preceding gene: 187735780
Following gene: 187735782
Centisome position: 58.56
GC content: 59.56
Gene sequence:
>633_bases ATGGAAGACCCCCTTTCATTGGAGCAATGTGCCGGACGTCTGGAACGGCGTGGATTCCGGAGTTTTGTAGTGCCGGACCT GAGGGCGGCTGCGGAGGTTATGCGCGGCCTGGTGCGGGAGTTCAGGCCGTCGTCCGCTTCCTATGGGGATTCCATGACCC TGAAGGATGCGGGCATTCTTGATGACCTGCGCTCCAATCCGGACATTCAGTTCTATGACGGCTTTGTTCCGGGCATGGTG CGGGAGGAGAAATGGGAAATCCGCCGCCAGGGCATGACGGCGGACCTGTTTTTAACCGGCGTCAATGCCGTCAGCATGGA AGGGACCCTGCACTGGGTGGACATGGTGGGCAACCGTGTGGCTCCGGTGGCATTCGGACCCCGGCGCGTCATTTTGCTGG CCGGTTCCAACAAGCTGGTGGCAACGCCGGCAGAGGCCCGGGAACGCATCCGCCGCATTGCGCCCCTGAACGCCAGGCGG CATGAAGGGTTCAGGACTCCCTGCATGCACACCGGAATCTGCGCGGATTGTAATTCCCCGGACCGCCTGTGCAATATTCA CATGTCCATTGTTAAATGCTTTCCCGAGGGAAGAATTTCCGTCATTCTGATGGAAGAACCCGGAGGACTTTGA
Upstream 100 bases:
>100_bases GGGAAGTGTCCGGTGAAATGGAAGCTCCGGCGGAAGAATAAAATCCAGGTTTCCCTGCTCCGGCGTCATGCCGGAGCAGG GGGCTTCATGGGCCGTTTTT
Downstream 100 bases:
>100_bases CCCATGCCTTTTCAAAACCGGATAGAAATCATGGCCCCGGCGGGGTCGTTTGAATCTCTGGCGGCCGCCTTGCAGGGCGG AGCGGACTCCGTGTACTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 210
Protein sequence:
>210_residues MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGILDDLRSNPDIQFYDGFVPGMV REEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRVAPVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARR HEGFRTPCMHTGICADCNSPDRLCNIHMSIVKCFPEGRISVILMEEPGGL
Sequences:
>Translated_210_residues MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGILDDLRSNPDIQFYDGFVPGMV REEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRVAPVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARR HEGFRTPCMHTGICADCNSPDRLCNIHMSIVKCFPEGRISVILMEEPGGL >Mature_210_residues MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGILDDLRSNPDIQFYDGFVPGMV REEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRVAPVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARR HEGFRTPCMHTGICADCNSPDRLCNIHMSIVKCFPEGRISVILMEEPGGL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23401; Mature: 23401
Theoretical pI: Translated: 7.82; Mature: 7.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 7.6 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 7.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGIL CCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCH DDLRSNPDIQFYDGFVPGMVREEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRV HHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEHHHCCEE APVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARRHEGFRTPCMHTGICADCNSP CCEEECCEEEEEEECCCCEEECCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEECCCCCH DRLCNIHMSIVKCFPEGRISVILMEEPGGL HHHHHHHHHHHHHCCCCCEEEEEEECCCCC >Mature Secondary Structure MEDPLSLEQCAGRLERRGFRSFVVPDLRAAAEVMRGLVREFRPSSASYGDSMTLKDAGIL CCCCCCHHHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCH DDLRSNPDIQFYDGFVPGMVREEKWEIRRQGMTADLFLTGVNAVSMEGTLHWVDMVGNRV HHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCEEEECCCEEEEHHHCCEE APVAFGPRRVILLAGSNKLVATPAEARERIRRIAPLNARRHEGFRTPCMHTGICADCNSP CCEEECCEEEEEEECCCCEEECCHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEECCCCCH DRLCNIHMSIVKCFPEGRISVILMEEPGGL HHHHHHHHHHHHHCCCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA