Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is 187735768

Identifier: 187735768

GI number: 187735768

Start: 1535136

End: 1536047

Strand: Reverse

Name: 187735768

Synonym: Amuc_1274

Alternate gene names: NA

Gene position: 1536047-1535136 (Counterclockwise)

Preceding gene: 187735769

Following gene: 187735767

Centisome position: 57.66

GC content: 47.92

Gene sequence:

>912_bases
ATGATGAAATATTTTATTTATGCGATTGCCGCCATACATCTTGGCTGTTCAACTTCCCTTGGGGAAGAGACCGGATTTGA
TCGCCAACTCCCGGCTCCTGATTCCATCCATATTCGCGGACAAATGGGAGAAAAATCAAAAAAATTAAAAGAATTTTTTA
AATCAGGAAATTTTAAACAATTCTATGGATATTCAAACACAGTTCTGTCAGAACTGAACGCCATGCGGCGCCATGGAACG
ATGACGCGGGAAGAGGCCTGCGACATGCTCTGGAGCCTTTATCTGATCAGCGGAGCCCCCATGTATGAAGCTCCGGATTA
CGACAGCGTTCAGCCATGGCCTTATAAAGACGAGCGGAACAACGACATTGCCGCCAAATCAAGAGTCATTTCCGCGCTCT
CCATCATGGATACGAAACAGATGTCGCACAACCTGGGCATCCACGAACAACGGCTGAAACATCTCCATGCCGCTTACGCC
GCCGCCATCATTAAAAGGCTGAAATCTCTGCACCTCCCTGATTTCGGGAAAAAAGAGACAGCGCTGAAAGATGAAATAAT
ACGTTCCCATCCTGCCAATCCGGACGGGAATGTCATCGGAACGCACCCGAGTGACTATAGCAACCTTCTTCGCATAGGCA
ATTTAAATTATTTTTCCATGAGAAACAGCATGTACCATAGCTATGTCTCTAAAATCATGGAGAAAAGATTTATCCCCATG
CTGGTGAAGTACTTCCCCGACCAGGCCGGAGAAGTCGTCAAATACATCAGGAAGGCGGGATACGGAGACGGCGAGGTTCT
CGACCTCATCGACCGAACGGCAGGATACAACTCCAAAACCGCCTACCTCTACCAGGGGAAAAGCGGAGAGGAACACAGGA
AAAAGCTTCAGCGGAAACAGAGCGGAGAGTGA

Upstream 100 bases:

>100_bases
CGACGACGGTTTCCAAATTCAATTGTTCCGTCAGCAGATCCACAGAAAAAAATAACAAGCACGTATTTATCAACCAGTCA
AAATAAATGAACCTAAAAAA

Downstream 100 bases:

>100_bases
CGCCGAACGTTCATTCATTGCGCCATCTGCCTCCTCCCAACCAGGAAAAACAACCCGGACAAGACGGTGAACCACGTTCT
CCATATAATCATCTTCATCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MMKYFIYAIAAIHLGCSTSLGEETGFDRQLPAPDSIHIRGQMGEKSKKLKEFFKSGNFKQFYGYSNTVLSELNAMRRHGT
MTREEACDMLWSLYLISGAPMYEAPDYDSVQPWPYKDERNNDIAAKSRVISALSIMDTKQMSHNLGIHEQRLKHLHAAYA
AAIIKRLKSLHLPDFGKKETALKDEIIRSHPANPDGNVIGTHPSDYSNLLRIGNLNYFSMRNSMYHSYVSKIMEKRFIPM
LVKYFPDQAGEVVKYIRKAGYGDGEVLDLIDRTAGYNSKTAYLYQGKSGEEHRKKLQRKQSGE

Sequences:

>Translated_303_residues
MMKYFIYAIAAIHLGCSTSLGEETGFDRQLPAPDSIHIRGQMGEKSKKLKEFFKSGNFKQFYGYSNTVLSELNAMRRHGT
MTREEACDMLWSLYLISGAPMYEAPDYDSVQPWPYKDERNNDIAAKSRVISALSIMDTKQMSHNLGIHEQRLKHLHAAYA
AAIIKRLKSLHLPDFGKKETALKDEIIRSHPANPDGNVIGTHPSDYSNLLRIGNLNYFSMRNSMYHSYVSKIMEKRFIPM
LVKYFPDQAGEVVKYIRKAGYGDGEVLDLIDRTAGYNSKTAYLYQGKSGEEHRKKLQRKQSGE
>Mature_303_residues
MMKYFIYAIAAIHLGCSTSLGEETGFDRQLPAPDSIHIRGQMGEKSKKLKEFFKSGNFKQFYGYSNTVLSELNAMRRHGT
MTREEACDMLWSLYLISGAPMYEAPDYDSVQPWPYKDERNNDIAAKSRVISALSIMDTKQMSHNLGIHEQRLKHLHAAYA
AAIIKRLKSLHLPDFGKKETALKDEIIRSHPANPDGNVIGTHPSDYSNLLRIGNLNYFSMRNSMYHSYVSKIMEKRFIPM
LVKYFPDQAGEVVKYIRKAGYGDGEVLDLIDRTAGYNSKTAYLYQGKSGEEHRKKLQRKQSGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34595; Mature: 34595

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMKYFIYAIAAIHLGCSTSLGEETGFDRQLPAPDSIHIRGQMGEKSKKLKEFFKSGNFKQ
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEE
FYGYSNTVLSELNAMRRHGTMTREEACDMLWSLYLISGAPMYEAPDYDSVQPWPYKDERN
ECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
NDIAAKSRVISALSIMDTKQMSHNLGIHEQRLKHLHAAYAAAIIKRLKSLHLPDFGKKET
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALKDEIIRSHPANPDGNVIGTHPSDYSNLLRIGNLNYFSMRNSMYHSYVSKIMEKRFIPM
HHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVKYFPDQAGEVVKYIRKAGYGDGEVLDLIDRTAGYNSKTAYLYQGKSGEEHRKKLQRKQ
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
SGE
CCC
>Mature Secondary Structure
MMKYFIYAIAAIHLGCSTSLGEETGFDRQLPAPDSIHIRGQMGEKSKKLKEFFKSGNFKQ
CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCEE
FYGYSNTVLSELNAMRRHGTMTREEACDMLWSLYLISGAPMYEAPDYDSVQPWPYKDERN
ECCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC
NDIAAKSRVISALSIMDTKQMSHNLGIHEQRLKHLHAAYAAAIIKRLKSLHLPDFGKKET
CCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH
ALKDEIIRSHPANPDGNVIGTHPSDYSNLLRIGNLNYFSMRNSMYHSYVSKIMEKRFIPM
HHHHHHHHHCCCCCCCCEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LVKYFPDQAGEVVKYIRKAGYGDGEVLDLIDRTAGYNSKTAYLYQGKSGEEHRKKLQRKQ
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHH
SGE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA