Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735767

Identifier: 187735767

GI number: 187735767

Start: 1534131

End: 1534982

Strand: Reverse

Name: 187735767

Synonym: Amuc_1273

Alternate gene names: NA

Gene position: 1534982-1534131 (Counterclockwise)

Preceding gene: 187735768

Following gene: 187735766

Centisome position: 57.62

GC content: 50.7

Gene sequence:

>852_bases
ATGCCGCCCGATTCCATCCATATCCGGAGAAGTACAGAAGGGCATGCTCCGCTCCTGAAAAGCCTGCTGGAACAAAATAA
TCTGAAAGCATTTTATCACCACGCCAAAACGGCTCTGTCAGAACTGAACGCCATGCGGCGCCATGGAACGATGACGCGGG
AAGGGGCCTGCGACATGCTCTGGAGCCTTTATCTGATCAGCGGAGCCCCCATGTATGAAGCTCCGGATTACGACAGCGTT
CAGCCATGGCCTTATAAAGATGAGCGGGACAACGACATTGCCGCCAAATCAGGAGTCATTTCCGCGCTCTCCATCGTGGA
TACGAAACAGATGTCGCGCAACCTGGGCATCCACGAACAACGGCTGAAACATCTCCATGCCGCTTACGCCGCCGCCATCA
TTAAAAGGCTGAAATCTCTGCACCTCCCTGATTTCGGAAAAAAAGAGACAGCGCTGAAAGATGCAATAATACGTTTCCAT
CCTGCCAATCCGGACGGGAATGTCATCGGCTCTGACGTTAAAGATTACGAATGGACTCACCGATGGAACAATCTGGTCAC
ATTTTCGTCAAGAAACAGCATGTATCATAGCTATGTCTCTAAAATCATGGAGAAAAGATTCATCCCAATGCTGGTGAAGT
ACTTCCCCGACCAGGCCGGGGAAGTCGTCAAATACATCAGGAAGGCGGGATACGGAGACGGCGAGGTTCTCGACCTCATC
GACCGAACGGCAGGATACAACTCCAAAACCGCCTACCTCTACCAGGGGAAAAGCGGGGAAGAACACAGGAAAAAATTTCA
TCAAAAAATACGGAACTCCTGTCCGGACGTGAGCCGGAATGCCAATAAATAA

Upstream 100 bases:

>100_bases
CCCGGACAAGACGGTGAACCACGTTCTCCATATAATCATCTTCATCTGCCTCGGATGGAGCCTTTCCTCCGCAGAGGGAC
ATTCATTCGATCATGAACTC

Downstream 100 bases:

>100_bases
AGGATAAAACGCCGGTCACACTCAACAACATGCCTCAACAGCGTTCACCGGAAAACTCCGGGTTCCTGTAAGCAGTCCAC
GGTTTTTCCTTGGCAGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 282

Protein sequence:

>283_residues
MPPDSIHIRRSTEGHAPLLKSLLEQNNLKAFYHHAKTALSELNAMRRHGTMTREGACDMLWSLYLISGAPMYEAPDYDSV
QPWPYKDERDNDIAAKSGVISALSIVDTKQMSRNLGIHEQRLKHLHAAYAAAIIKRLKSLHLPDFGKKETALKDAIIRFH
PANPDGNVIGSDVKDYEWTHRWNNLVTFSSRNSMYHSYVSKIMEKRFIPMLVKYFPDQAGEVVKYIRKAGYGDGEVLDLI
DRTAGYNSKTAYLYQGKSGEEHRKKFHQKIRNSCPDVSRNANK

Sequences:

>Translated_283_residues
MPPDSIHIRRSTEGHAPLLKSLLEQNNLKAFYHHAKTALSELNAMRRHGTMTREGACDMLWSLYLISGAPMYEAPDYDSV
QPWPYKDERDNDIAAKSGVISALSIVDTKQMSRNLGIHEQRLKHLHAAYAAAIIKRLKSLHLPDFGKKETALKDAIIRFH
PANPDGNVIGSDVKDYEWTHRWNNLVTFSSRNSMYHSYVSKIMEKRFIPMLVKYFPDQAGEVVKYIRKAGYGDGEVLDLI
DRTAGYNSKTAYLYQGKSGEEHRKKFHQKIRNSCPDVSRNANK
>Mature_282_residues
PPDSIHIRRSTEGHAPLLKSLLEQNNLKAFYHHAKTALSELNAMRRHGTMTREGACDMLWSLYLISGAPMYEAPDYDSVQ
PWPYKDERDNDIAAKSGVISALSIVDTKQMSRNLGIHEQRLKHLHAAYAAAIIKRLKSLHLPDFGKKETALKDAIIRFHP
ANPDGNVIGSDVKDYEWTHRWNNLVTFSSRNSMYHSYVSKIMEKRFIPMLVKYFPDQAGEVVKYIRKAGYGDGEVLDLID
RTAGYNSKTAYLYQGKSGEEHRKKFHQKIRNSCPDVSRNANK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32333; Mature: 32202

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPPDSIHIRRSTEGHAPLLKSLLEQNNLKAFYHHAKTALSELNAMRRHGTMTREGACDML
CCCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WSLYLISGAPMYEAPDYDSVQPWPYKDERDNDIAAKSGVISALSIVDTKQMSRNLGIHEQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLKHLHAAYAAAIIKRLKSLHLPDFGKKETALKDAIIRFHPANPDGNVIGSDVKDYEWTH
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHH
RWNNLVTFSSRNSMYHSYVSKIMEKRFIPMLVKYFPDQAGEVVKYIRKAGYGDGEVLDLI
HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
DRTAGYNSKTAYLYQGKSGEEHRKKFHQKIRNSCPDVSRNANK
HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PPDSIHIRRSTEGHAPLLKSLLEQNNLKAFYHHAKTALSELNAMRRHGTMTREGACDML
CCCCEEEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
WSLYLISGAPMYEAPDYDSVQPWPYKDERDNDIAAKSGVISALSIVDTKQMSRNLGIHEQ
HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH
RLKHLHAAYAAAIIKRLKSLHLPDFGKKETALKDAIIRFHPANPDGNVIGSDVKDYEWTH
HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHEEECCCCCCCCCCCCCHHHHHHH
RWNNLVTFSSRNSMYHSYVSKIMEKRFIPMLVKYFPDQAGEVVKYIRKAGYGDGEVLDLI
HHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHHHHHH
DRTAGYNSKTAYLYQGKSGEEHRKKFHQKIRNSCPDVSRNANK
HHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA