Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735769
Identifier: 187735769
GI number: 187735769
Start: 1536062
End: 1537108
Strand: Reverse
Name: 187735769
Synonym: Amuc_1275
Alternate gene names: NA
Gene position: 1537108-1536062 (Counterclockwise)
Preceding gene: 187735770
Following gene: 187735768
Centisome position: 57.7
GC content: 44.13
Gene sequence:
>1047_bases ATGAACGCGAACGCCATCATCCGGGCATCCGCCCCATTCTTCCAAAAATACGTCTTATCCCCGGGAATGCCGGCAAAATG CCCTCTCGCCATGATGCTGCTGGGCCTCTGCTTCACAGCGCCTTTACTGGCAAATGAGGTATTGCGCATCGAATCGCAGG CGGCAGAGTACTCTGCCCAAATTTATATTCAAGAAGAAGAAAAAGGCTCCGTACCTGAAAAAGAGAAAGAGAACGATCAA AAAAGAAAGAAATTGGGCATAGGTGAAACAGTAATATTAACCCTGGTTTCAGACAAGCCCCAGCTCATTGGGGATCCATC CCAGATCGAATGGACAATCGAAGAAGGAGAAAATCTGGCTTCTTTTCAAGAGGAAGACAACTCTGTCATTCAAACATTGG TTATTAGAAATGACCTCTCCCAAGGAGGCGACATTACTGTTAAAGCAGTCACGGAAGAAGGAAGAGAAGCGAAAATCACG TTATCAGCCATTGTTCCCGAAGGGATCAGCGCAAAACATTTACGGAAATCATATGACAGAAATCATCCGGATTTTAATAA AAGAGGAGTCATTTATTTTGATCTGCCAAAGGATGGTGATCAAGAAATGGCAGGGGCATCAGCTGTCCTGGAATTAACGT TCCTCCCTACAAGCGTGAATTTTCGAAATGTCCATATTATTGAACGGGATAAGGGCTGCGTTCCCTCCCCGGCTGAAGGC AGCCTGGCAGCCCCTCATGATCCCAATCCTGCACCAGTACCCCTTGACAACAAAAACAGGCTATCTGACAATATTGGAAG CAAAAAACTCATTTCGGAATTAAGATTTTACGACTTGCCGCAAACTTATAAATGGCTTTGCGACTGGAACATCAATGTCG ACGGGAAAGATGTAAAAACCATTCAGACTGTTGAACAGCATTTTTTTTACGACTGGATTGACGTCGTCAACGAAATAGCT ACGACGACGGTTTCCAAATTCAATTGTTCCGTCAGCAGATCCACAGAAAAAAATAACAAGCACGTATTTATCAACCAGTC AAAATAA
Upstream 100 bases:
>100_bases AAAAATTAAAGCATCAAGGGGAAATATTGATCAACAAAATCAGCGGCAATAAAGTCTCGCCCCTGCGGCAGAACCGGTAA CCAGCACAGAGAATTTTAAC
Downstream 100 bases:
>100_bases ATGAACCTAAAAAAATGATGAAATATTTTATTTATGCGATTGCCGCCATACATCTTGGCTGTTCAACTTCCCTTGGGGAA GAGACCGGATTTGATCGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MNANAIIRASAPFFQKYVLSPGMPAKCPLAMMLLGLCFTAPLLANEVLRIESQAAEYSAQIYIQEEEKGSVPEKEKENDQ KRKKLGIGETVILTLVSDKPQLIGDPSQIEWTIEEGENLASFQEEDNSVIQTLVIRNDLSQGGDITVKAVTEEGREAKIT LSAIVPEGISAKHLRKSYDRNHPDFNKRGVIYFDLPKDGDQEMAGASAVLELTFLPTSVNFRNVHIIERDKGCVPSPAEG SLAAPHDPNPAPVPLDNKNRLSDNIGSKKLISELRFYDLPQTYKWLCDWNINVDGKDVKTIQTVEQHFFYDWIDVVNEIA TTTVSKFNCSVSRSTEKNNKHVFINQSK
Sequences:
>Translated_348_residues MNANAIIRASAPFFQKYVLSPGMPAKCPLAMMLLGLCFTAPLLANEVLRIESQAAEYSAQIYIQEEEKGSVPEKEKENDQ KRKKLGIGETVILTLVSDKPQLIGDPSQIEWTIEEGENLASFQEEDNSVIQTLVIRNDLSQGGDITVKAVTEEGREAKIT LSAIVPEGISAKHLRKSYDRNHPDFNKRGVIYFDLPKDGDQEMAGASAVLELTFLPTSVNFRNVHIIERDKGCVPSPAEG SLAAPHDPNPAPVPLDNKNRLSDNIGSKKLISELRFYDLPQTYKWLCDWNINVDGKDVKTIQTVEQHFFYDWIDVVNEIA TTTVSKFNCSVSRSTEKNNKHVFINQSK >Mature_348_residues MNANAIIRASAPFFQKYVLSPGMPAKCPLAMMLLGLCFTAPLLANEVLRIESQAAEYSAQIYIQEEEKGSVPEKEKENDQ KRKKLGIGETVILTLVSDKPQLIGDPSQIEWTIEEGENLASFQEEDNSVIQTLVIRNDLSQGGDITVKAVTEEGREAKIT LSAIVPEGISAKHLRKSYDRNHPDFNKRGVIYFDLPKDGDQEMAGASAVLELTFLPTSVNFRNVHIIERDKGCVPSPAEG SLAAPHDPNPAPVPLDNKNRLSDNIGSKKLISELRFYDLPQTYKWLCDWNINVDGKDVKTIQTVEQHFFYDWIDVVNEIA TTTVSKFNCSVSRSTEKNNKHVFINQSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38864; Mature: 38864
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANAIIRASAPFFQKYVLSPGMPAKCPLAMMLLGLCFTAPLLANEVLRIESQAAEYSAQ CCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IYIQEEEKGSVPEKEKENDQKRKKLGIGETVILTLVSDKPQLIGDPSQIEWTIEEGENLA EEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHH SFQEEDNSVIQTLVIRNDLSQGGDITVKAVTEEGREAKITLSAIVPEGISAKHLRKSYDR HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCC NHPDFNKRGVIYFDLPKDGDQEMAGASAVLELTFLPTSVNFRNVHIIERDKGCVPSPAEG CCCCCCCCEEEEEECCCCCCHHHHCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCC SLAAPHDPNPAPVPLDNKNRLSDNIGSKKLISELRFYDLPQTYKWLCDWNINVDGKDVKT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCHHH IQTVEQHFFYDWIDVVNEIATTTVSKFNCSVSRSTEKNNKHVFINQSK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCC >Mature Secondary Structure MNANAIIRASAPFFQKYVLSPGMPAKCPLAMMLLGLCFTAPLLANEVLRIESQAAEYSAQ CCCCEEEEECCHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE IYIQEEEKGSVPEKEKENDQKRKKLGIGETVILTLVSDKPQLIGDPSQIEWTIEEGENLA EEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCEEEEECCCCCHH SFQEEDNSVIQTLVIRNDLSQGGDITVKAVTEEGREAKITLSAIVPEGISAKHLRKSYDR HHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCHHHHHHHHCC NHPDFNKRGVIYFDLPKDGDQEMAGASAVLELTFLPTSVNFRNVHIIERDKGCVPSPAEG CCCCCCCCEEEEEECCCCCCHHHHCCCEEEEEEEECCCCCEEEEEEEECCCCCCCCCCCC SLAAPHDPNPAPVPLDNKNRLSDNIGSKKLISELRFYDLPQTYKWLCDWNINVDGKDVKT CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCHHH IQTVEQHFFYDWIDVVNEIATTTVSKFNCSVSRSTEKNNKHVFINQSK HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA