Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735668

Identifier: 187735668

GI number: 187735668

Start: 1409311

End: 1409994

Strand: Direct

Name: 187735668

Synonym: Amuc_1174

Alternate gene names: NA

Gene position: 1409311-1409994 (Clockwise)

Preceding gene: 187735667

Following gene: 187735670

Centisome position: 52.9

GC content: 56.14

Gene sequence:

>684_bases
ATGTCCGACTGCCTTTCCTCTCTGGGCTATCCTTTCCGTGGAAGGCCCATGGTTTTTGTCTTTTCCGTCATGATGGTATG
GGGCATGTTCCTGGCGGCCCGGGATGTTCTCATCGGATGGATTGCCGCCTTTTGTTTTCTGCTGCCTTTCATGTGCGCCT
TTTTCATGAAAATGGTGAGGCAGTCCGCCATGGGAGAAGAGGATATCTGCCCCTTTCCTGAACTGGATGAATGGCTTGAC
TCCCTCATGCTGCCTTTTGTCCGGCTGGTGGTGTGCATCATCGTTTCCTTCCTTCCTTTCGCCGTGTATGCGCATACTGC
GGCCTGGGCGGCGGATACTCCCCTGGCGTGGCTGTTCCTGGCGGCGGGTGTGATTTACTTTCCCGGCGTATTCATGAGAA
CCTCCGTTCGGGAACGTTTTTCCGGTCTTTCTCCCGTGGGCTGGTGGGGGCTGGTCAGAAGGGCTCCCTTTTCCTATGCC
GGGTTACTTGGCGCCATATGCGCCGGGGGATGGATCATCCTGAACCTTCCTTCAGGGCCTTTGATGGATTTCGCCATGGT
GCCCGTGAAGCTGTATGTCGCTTGCGTGTTGATGAATATGTGCGGACTGTTCATGCTCAAGCATGAATTTGCCGGGGAGG
AAGAGGTCGGCAGCTTTTCCCCTTCCGGGCCTGCGGCCTCGTGA

Upstream 100 bases:

>100_bases
TGTGGAGGCATTCTATTCCTGAAGAGAAGGGAGGATTATTTTGTTAGACAGTTGGATAAGACGTTGACGATACGTGAATG
AATGTTCTAACATTTTTGGT

Downstream 100 bases:

>100_bases
TGCTGCCGCCTTTCCGGCGGGCCGGGAACAGGTGAGTTTATTTGGCGGGTTCCTTGTCCAGGTTCAGGATACCCAGTACA
GACATGTTGCCTTCCGCATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVRQSAMGEEDICPFPELDEWLD
SLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFLAAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYA
GLLGAICAGGWIILNLPSGPLMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS

Sequences:

>Translated_227_residues
MSDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVRQSAMGEEDICPFPELDEWLD
SLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFLAAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYA
GLLGAICAGGWIILNLPSGPLMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS
>Mature_226_residues
SDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVRQSAMGEEDICPFPELDEWLDS
LMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFLAAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYAG
LLGAICAGGWIILNLPSGPLMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25113; Mature: 24982

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
7.0 %Met     (Translated Protein)
10.6 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVR
CCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAMGEEDICPFPELDEWLDSLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFL
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYAGLLGAICAGGWIILNLPSGP
HHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCC
LMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC
>Mature Secondary Structure 
SDCLSSLGYPFRGRPMVFVFSVMMVWGMFLAARDVLIGWIAAFCFLLPFMCAFFMKMVR
CHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QSAMGEEDICPFPELDEWLDSLMLPFVRLVVCIIVSFLPFAVYAHTAAWAADTPLAWLFL
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
AAGVIYFPGVFMRTSVRERFSGLSPVGWWGLVRRAPFSYAGLLGAICAGGWIILNLPSGP
HHHHHHHCHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCCC
LMDFAMVPVKLYVACVLMNMCGLFMLKHEFAGEEEVGSFSPSGPAAS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA