Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is yidJ [C]
Identifier: 187735613
GI number: 187735613
Start: 1336709
End: 1338595
Strand: Direct
Name: yidJ [C]
Synonym: Amuc_1118
Alternate gene names: 187735613
Gene position: 1336709-1338595 (Clockwise)
Preceding gene: 187735612
Following gene: 187735615
Centisome position: 50.17
GC content: 55.27
Gene sequence:
>1887_bases ATGATTCGTTATTATTGGGGGAGGTTTTGGCCGTTCCTCCTGTTTGCGTTCGGCATTGAGGCGGTGGAAAATCTGTTTAC GGTATTTTTCGAATACCGCAACATGGATTTCGGGTTGCTTCCCCTCCTGAAAACGGCGTACGTTTTTGTGACGGAGTTTG CCGTCACCATGTGCTACTGGCTTATTCCCTATGCCGTTTATTTGTGGATTCTGCCGCGCGGGAAAGCAGGAGGGAAGGCG GACAGGTGGCTCACCTCCGCATGGTTTTTCCTGTTTGTGCTCGCCAATCTGTTTGAAGATGTGGCGGAAGCCTTTTTCTG GAACGAGTTTGAAGCCAGCTTCAATTTCATTGCGGTGGATTACCTGGTTTACACCAAGGAGGTTATCGGGAATATTTACG AGTCCTATCCCATCATTCCTATTCTGGGCGGCATTCTGGCGGCGTCCGTTCTGGCCGCCTGGGGAATGAAGAGGTTCCTG CTTCCCAGGAACGGGGCGGTTCCCGCCGGATGGAAACGGGGCTGTGTGGTGCTGTTCCTGCTGGCCTGCGTCACGGGGGG ATATTGGCTGGTGGATATCAAGGATGCGGATGCCGTGAACAACCGTTATAATTCGGAAATGGCCAAGGATGGCCTTTACA GCCTGTTCAGCGCCTTTCTCAAGAATGAACTGGATTACCGCGCTTATTACCGGACGCTGCCGGATGCGGAAGCGGCGGCG TTTCTGGCCCGGGAGTTCACGGCGGATGACACGTCCGTGCCGGAGGCTTCGTCCGGCAGCGTAAAGAGGCAGGTGCGTCC TTCCGAGGGGGCTATCCGCCCGAATGTCGTGGTTGTGGTCATGGAGAGCATGGGAGCGGAATTTTTGAACGAGTGCCGGG AAGACGGGGCTGACGTCACTCCGTGCCTGAGCCGTCTGGGAAAGGAAGGCATTTTTTTCCCGAATACTTATGCCACGGGC ACCCGTTCCGTACGCGGTCTGGAAGCAATCAGCACATCCCTGCCGCCGCTTCCCGGCATGTCCATCCTTCGCCAGGAAGG AAACGAGCATTTGCAGACCATAGGTTCCATATTCAGGGACAAGGGATATGATCTCAAATGGATTTACGGCGGCTACGGGT ATTTTGACAACATGAATTATTTTTTCGGGAACAACGGGTTTCAGGTTCTGGACCGTAATTCCATGGCTGATTCCGAGGTG ACCCATTCCACCATTTGGGGCGTTTGCGATGAAGATTTGTTCCGCCGCGCCGTACGGGAGGCGGATGAATCCTGCGGACG CGGCAAGCCGTTTTTGCAGGTGGTGTTTACCACGTCCAACCACCGCCCCTACACGTATCCGGAAGGGCGCATTGACATTC CTTCCCACACGGGGCGCATGGGGGCCGTGAAATACGCGGATTATGCGGTAGGCGCCTTTGTGGAGGAGGCCAGAACCAAA CCCTGGTTTGACAACACGCTGTTCGTGTTCGTAGGAGACCACGGCGCCGGGAGCGCGGGAAAGCAGGCCCTCAATCCGGA AACGCACCGCATTTTTTCCATTTTCTACGCTCCGGCTCTGCTGAAACCGGAACGGCGGGACACTCCCGTGAGCCAGATTG ACGTGCTGCCCACCCTGCTGGGGCTGTTGAACTGGCCGTATGATGCGGCCTTTTATGGGAAGGATGCCTTGAAGCCTTCC TATCAATCCCGGTATTTTGTGAGCAATTACCAATATATCGGCTATTTGAAGGGGAAAGACATGGTGGTGCTCAAACCCCA GCGCGGAGTGGAATTTTTCCGGGACGGAGAGGCCGTTGAGCCGGACGGGCGGATGAAAGAGCTGGAAAGGGAAGCGGTTT ATTACTATCAGCACGCTTCCGGCTGGCGCACCAGTTTGAAAGAATAA
Upstream 100 bases:
>100_bases AACCTTCTCCCGTCTCATTTCCTTGGAATGACATCCATATCACCGTGATGTTGTGATGGAGCATTGACGGCATGCTCCGG CTGTCATATTTCCGGTAGCG
Downstream 100 bases:
>100_bases GGCTCCGCAAGGTGCGGAGGCCGTGATTGTGGCGGCCTCCGCCCGCGCATGGAAAATGCGTTCAGGATTTGCTTCCGTCC CTGTAATCCTGGAGAGCGTC
Product: sulfatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 628; Mature: 628
Protein sequence:
>628_residues MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYWLIPYAVYLWILPRGKAGGKA DRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVDYLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFL LPRNGAVPAGWKRGCVVLFLLACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVTPCLSRLGKEGIFFPNTYATG TRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRDKGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEV THSTIWGVCDEDLFRRAVREADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLLGLLNWPYDAAFYGKDALKPS YQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVEPDGRMKELEREAVYYYQHASGWRTSLKE
Sequences:
>Translated_628_residues MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYWLIPYAVYLWILPRGKAGGKA DRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVDYLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFL LPRNGAVPAGWKRGCVVLFLLACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVTPCLSRLGKEGIFFPNTYATG TRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRDKGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEV THSTIWGVCDEDLFRRAVREADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLLGLLNWPYDAAFYGKDALKPS YQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVEPDGRMKELEREAVYYYQHASGWRTSLKE >Mature_628_residues MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYWLIPYAVYLWILPRGKAGGKA DRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVDYLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFL LPRNGAVPAGWKRGCVVLFLLACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVTPCLSRLGKEGIFFPNTYATG TRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRDKGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEV THSTIWGVCDEDLFRRAVREADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLLGLLNWPYDAAFYGKDALKPS YQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVEPDGRMKELEREAVYYYQHASGWRTSLKE
Specific function: Unknown
COG id: COG1368
COG function: function code M; Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012160 - InterPro: IPR000917 [H]
Pfam domain/function: PF00884 Sulfatase [H]
EC number: 3.1.6.- [C]
Molecular weight: Translated: 71291; Mature: 71291
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYW CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LIPYAVYLWILPRGKAGGKADRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVD HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH YLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFLLPRNGAVPAGWKRGCVVLFL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHH LACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHH FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVT HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCHH PCLSRLGKEGIFFPNTYATGTRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRD HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHC KGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEVTHSTIWGVCDEDLFRRAVRE CCCCEEEEECCCCEECCCCEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHH ADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK HHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHCCC PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLL CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GLLNWPYDAAFYGKDALKPSYQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVE HHHCCCCCHHCCCCCCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCHHHCCCCCCC PDGRMKELEREAVYYYQHASGWRTSLKE CCHHHHHHHHHHHEEEECCCCCHHHCCC >Mature Secondary Structure MIRYYWGRFWPFLLFAFGIEAVENLFTVFFEYRNMDFGLLPLLKTAYVFVTEFAVTMCYW CCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH LIPYAVYLWILPRGKAGGKADRWLTSAWFFLFVLANLFEDVAEAFFWNEFEASFNFIAVD HHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHH YLVYTKEVIGNIYESYPIIPILGGILAASVLAAWGMKRFLLPRNGAVPAGWKRGCVVLFL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCHHHHHHHHH LACVTGGYWLVDIKDADAVNNRYNSEMAKDGLYSLFSAFLKNELDYRAYYRTLPDAEAAA HHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCHHHHH FLAREFTADDTSVPEASSGSVKRQVRPSEGAIRPNVVVVVMESMGAEFLNECREDGADVT HHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCEEEEEHHHCCHHHHHHHHHCCCCHH PCLSRLGKEGIFFPNTYATGTRSVRGLEAISTSLPPLPGMSILRQEGNEHLQTIGSIFRD HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCHHHHHHHHHHHHC KGYDLKWIYGGYGYFDNMNYFFGNNGFQVLDRNSMADSEVTHSTIWGVCDEDLFRRAVRE CCCCEEEEECCCCEECCCCEEECCCCCEEEECCCCCCCHHHHHHHHCCCCHHHHHHHHHH ADESCGRGKPFLQVVFTTSNHRPYTYPEGRIDIPSHTGRMGAVKYADYAVGAFVEEARTK HHHHCCCCCCEEEEEEEECCCCCCCCCCCCEECCCCCCCCCCEEHHHHHHHHHHHHHCCC PWFDNTLFVFVGDHGAGSAGKQALNPETHRIFSIFYAPALLKPERRDTPVSQIDVLPTLL CCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH GLLNWPYDAAFYGKDALKPSYQSRYFVSNYQYIGYLKGKDMVVLKPQRGVEFFRDGEAVE HHHCCCCCHHCCCCCCCCCCCCCCEEEECCEEEEEECCCCEEEECCCCCCHHHCCCCCCC PDGRMKELEREAVYYYQHASGWRTSLKE CCHHHHHHHHHHHEEEECCCCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]