Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is 187735560
Identifier: 187735560
GI number: 187735560
Start: 1272008
End: 1272652
Strand: Reverse
Name: 187735560
Synonym: Amuc_1065
Alternate gene names: NA
Gene position: 1272652-1272008 (Counterclockwise)
Preceding gene: 187735562
Following gene: 187735559
Centisome position: 47.77
GC content: 60.31
Gene sequence:
>645_bases ATGCTATTCGCAGTAGTGATTTTCCTTTCCGTGGTCGTGCTCGGTGTCATTGCCGCGCTGCGTTTCACCAAAGGCATCAT TCCCCTGCGCACCTACGAATCCCGGGAACTGCCCGGTTTCCCCGGCCCGGCTGGATTAATCCACCGCCTGGACGGTGCGG AAAAACGCCAGCGGAAACTGGAGAAAGCCCGGTTTCCCGGAGTGGATGAAAACGGATTCATCAGCCTTCCTCCGGCATGG GAAGGCAAGGTGACCGCAGGCCGGCTGGCCTGCGTAGCCCATACCTGGGCCATGAGCAGCCTGGTCCGGGAAGACCCGGA GGCGGCAAAAGCCCGCAAAACCGCCTCTGCGCGCGCCACGATGATTCCCTTTTTCACAGCTCTTATCCTGCTGGGAATGC TGGCGACCGGACTGTTGAAATTCCAGATCGCGCTGGCCATCGGGCTGGCCTGCTGGGCCTTTTTCACTTTCTCCGCCCTT CCCACCCAGTTCCGCGAATGGAAAGCGGCGGAAATAGCCAAGTCAGGGCTGAAGGAAGCCGGGCTGTGGCCCGTGCTGCC TTCGGATGCCATGGCTGTGGAACAATGCCTGAAAGCACTGTCATGGTGCCACGTGGCAGGCTTCCGGCGTATTTTGCCCA GATAG
Upstream 100 bases:
>100_bases AACGATGTCCGCATCCGCACCCGGCTGTTAGCCGGGAAGGACGGCTTCATGCCAGCCGGAGAGATTGACGGACACACGGG CATATGAGAAAAAGCCGTCT
Downstream 100 bases:
>100_bases AGGGGGGGTCCTGGCGGTGAAGCGCATTTTTCCGGTTAAACCGGCCTTCGGGAGAAAAAAATCTTGAAACGGGGATGCGT GTAACCCACTCTTTCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKLEKARFPGVDENGFISLPPAW EGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARATMIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSAL PTQFREWKAAEIAKSGLKEAGLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR
Sequences:
>Translated_214_residues MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKLEKARFPGVDENGFISLPPAW EGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARATMIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSAL PTQFREWKAAEIAKSGLKEAGLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR >Mature_214_residues MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKLEKARFPGVDENGFISLPPAW EGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARATMIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSAL PTQFREWKAAEIAKSGLKEAGLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23390; Mature: 23390
Theoretical pI: Translated: 10.66; Mature: 10.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH EKARFPGVDENGFISLPPAWEGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARAT HHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH MIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSALPTQFREWKAAEIAKSGLKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MLFAVVIFLSVVVLGVIAALRFTKGIIPLRTYESRELPGFPGPAGLIHRLDGAEKRQRKL CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH EKARFPGVDENGFISLPPAWEGKVTAGRLACVAHTWAMSSLVREDPEAAKARKTASARAT HHHCCCCCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH MIPFFTALILLGMLATGLLKFQIALAIGLACWAFFTFSALPTQFREWKAAEIAKSGLKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GLWPVLPSDAMAVEQCLKALSWCHVAGFRRILPR CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA