Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

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The map label for this gene is epsJ [H]

Identifier: 187735446

GI number: 187735446

Start: 1125947

End: 1127023

Strand: Direct

Name: epsJ [H]

Synonym: Amuc_0945

Alternate gene names: 187735446

Gene position: 1125947-1127023 (Clockwise)

Preceding gene: 187735439

Following gene: 187735453

Centisome position: 42.26

GC content: 59.15

Gene sequence:

>1077_bases
ATGAGCGTATCCGTTTCCATCATTGTTCCCTGTTATAATGTTGCCGCTTATTTGGACCAGTGTATGGAAAGCCTGGCCGG
CCAGAGCATGGAAGATATCGAAATCATTTGCGTCAATGACGGTTCTTCCGACCGTACGGCGGAGATATTGCGCGAATGGC
GGGACAGGGACGGCCGCGTCCGGGTAATTGACCGGAAAAACAGCGGTGTTTCCGCGGCGAGGAACAGCGGCATGGAAGCG
GCTGCGGGAAAGTATATCGGCTTTGTGGACCCGGACGACGTGGTGGAGCGGAATATGTTCCGGCGCCTGTTTGATGCGGC
CGTGGAAAAAGATGCGGACGTAGCGGTGTGCGGATACCATGAGTTCTGCGACCGCGGAGGCATGGATATGCCTGAAAGCG
GCTGGTCGCCGTCAGCCGGGTTTTTCCCGGAAGAAAAAGCGGAGCGGTTCCGGCGGGGGACGCCCTGGAGCCGGTGCGCG
GGAACGGTGTGGAATAAGCTGATCCGCAGGGAGCTGCTGGAAGAAAACGGTGTGCGTTTCGTTCCCGGATTGCGCCAGGG
GGAGGATTTGTATTTCTGTCTGATGCTGTTGACTGTTGCTCCGCGGCTCCTGATCCTTCCCGACCGTTTGTACCATTACC
GGAGGGAACGCCCCGGTTCCGCCTCCTGCGGGCGGGATCCCCGCCTGGGGGATTTCCGCATGGATTTGATGGGCATGGAA
TCTCTGGCGCGTTTCTGGGGGGAGCGGGGGCTCCTTGATTCTCCCGCCGCCTTCGGTCTGGTGGACTACTGCATGGAGTT
GATGCGCAGGCATTTCATCATGAAAGAGGGAGCTTTTTTCAAAGCGTCTCCGGAAGACCGGGAAGTTCTGCTTTCCGGCT
GGAAAAAGTGGCTGGAGCTGGTGGGCGCGGAGAACGTCCTTCCCCGTCTGGACCGGTGGGACCGGGCTTTTTGCCGCCTT
CTGCTGGATTGCCCCCTGCGGAGCAATTTTTTCTCTGCCCTGCATTCCCGCCTGATGTCGTCCCGCAAGGGGCGCCGGGG
GGCTTACTATACCCTGAAAAGGCACCTGATGAAGTGA

Upstream 100 bases:

>100_bases
AATAGTTTCCCTCTTCCGGGTGTTCCGTTTTTCAACAGATGGCGTTGCTGTTTTTTCTTGATGTGAATTTTCAATCCGGA
TAAAAAAGGATGCTTCCGCC

Downstream 100 bases:

>100_bases
AAAGGGGAAATTTTCTCCCCCCTTTCCCTGCTGTTCCGGCGCCGCATGGGGCTGCGGAAAGGCGGAATGCCTGCCGGCAT
CCTACAGGCCCGTGTAGCAC

Product: glycosyl transferase family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MSVSVSIIVPCYNVAAYLDQCMESLAGQSMEDIEIICVNDGSSDRTAEILREWRDRDGRVRVIDRKNSGVSAARNSGMEA
AAGKYIGFVDPDDVVERNMFRRLFDAAVEKDADVAVCGYHEFCDRGGMDMPESGWSPSAGFFPEEKAERFRRGTPWSRCA
GTVWNKLIRRELLEENGVRFVPGLRQGEDLYFCLMLLTVAPRLLILPDRLYHYRRERPGSASCGRDPRLGDFRMDLMGME
SLARFWGERGLLDSPAAFGLVDYCMELMRRHFIMKEGAFFKASPEDREVLLSGWKKWLELVGAENVLPRLDRWDRAFCRL
LLDCPLRSNFFSALHSRLMSSRKGRRGAYYTLKRHLMK

Sequences:

>Translated_358_residues
MSVSVSIIVPCYNVAAYLDQCMESLAGQSMEDIEIICVNDGSSDRTAEILREWRDRDGRVRVIDRKNSGVSAARNSGMEA
AAGKYIGFVDPDDVVERNMFRRLFDAAVEKDADVAVCGYHEFCDRGGMDMPESGWSPSAGFFPEEKAERFRRGTPWSRCA
GTVWNKLIRRELLEENGVRFVPGLRQGEDLYFCLMLLTVAPRLLILPDRLYHYRRERPGSASCGRDPRLGDFRMDLMGME
SLARFWGERGLLDSPAAFGLVDYCMELMRRHFIMKEGAFFKASPEDREVLLSGWKKWLELVGAENVLPRLDRWDRAFCRL
LLDCPLRSNFFSALHSRLMSSRKGRRGAYYTLKRHLMK
>Mature_357_residues
SVSVSIIVPCYNVAAYLDQCMESLAGQSMEDIEIICVNDGSSDRTAEILREWRDRDGRVRVIDRKNSGVSAARNSGMEAA
AGKYIGFVDPDDVVERNMFRRLFDAAVEKDADVAVCGYHEFCDRGGMDMPESGWSPSAGFFPEEKAERFRRGTPWSRCAG
TVWNKLIRRELLEENGVRFVPGLRQGEDLYFCLMLLTVAPRLLILPDRLYHYRRERPGSASCGRDPRLGDFRMDLMGMES
LARFWGERGLLDSPAAFGLVDYCMELMRRHFIMKEGAFFKASPEDREVLLSGWKKWLELVGAENVLPRLDRWDRAFCRLL
LDCPLRSNFFSALHSRLMSSRKGRRGAYYTLKRHLMK

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Homo sapiens, GI57770468, Length=125, Percent_Identity=32.8, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI1790044, Length=234, Percent_Identity=32.4786324786325, Blast_Score=121, Evalue=9e-29,
Organism=Escherichia coli, GI1787259, Length=96, Percent_Identity=35.4166666666667, Blast_Score=67, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 41049; Mature: 40918

Theoretical pI: Translated: 8.04; Mature: 8.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVSVSIIVPCYNVAAYLDQCMESLAGQSMEDIEIICVNDGSSDRTAEILREWRDRDGRV
CCEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCE
RVIDRKNSGVSAARNSGMEAAAGKYIGFVDPDDVVERNMFRRLFDAAVEKDADVAVCGYH
EEEECCCCCCHHHHHCCCHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
EFCDRGGMDMPESGWSPSAGFFPEEKAERFRRGTPWSRCAGTVWNKLIRRELLEENGVRF
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
VPGLRQGEDLYFCLMLLTVAPRLLILPDRLYHYRRERPGSASCGRDPRLGDFRMDLMGME
CCCCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
SLARFWGERGLLDSPAAFGLVDYCMELMRRHFIMKEGAFFKASPEDREVLLSGWKKWLEL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
VGAENVLPRLDRWDRAFCRLLLDCPLRSNFFSALHSRLMSSRKGRRGAYYTLKRHLMK
HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SVSVSIIVPCYNVAAYLDQCMESLAGQSMEDIEIICVNDGSSDRTAEILREWRDRDGRV
CEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCE
RVIDRKNSGVSAARNSGMEAAAGKYIGFVDPDDVVERNMFRRLFDAAVEKDADVAVCGYH
EEEECCCCCCHHHHHCCCHHHCCCEECCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCH
EFCDRGGMDMPESGWSPSAGFFPEEKAERFRRGTPWSRCAGTVWNKLIRRELLEENGVRF
HHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEE
VPGLRQGEDLYFCLMLLTVAPRLLILPDRLYHYRRERPGSASCGRDPRLGDFRMDLMGME
CCCCCCCCHHHHHHHHHHHCCHHEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
SLARFWGERGLLDSPAAFGLVDYCMELMRRHFIMKEGAFFKASPEDREVLLSGWKKWLEL
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
VGAENVLPRLDRWDRAFCRLLLDCPLRSNFFSALHSRLMSSRKGRRGAYYTLKRHLMK
HCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]