Definition Akkermansia muciniphila ATCC BAA-835, complete genome.
Accession NC_010655
Length 2,664,102

Click here to switch to the map view.

The map label for this gene is 187735453

Identifier: 187735453

GI number: 187735453

Start: 1134049

End: 1134807

Strand: Direct

Name: 187735453

Synonym: Amuc_0952

Alternate gene names: NA

Gene position: 1134049-1134807 (Clockwise)

Preceding gene: 187735446

Following gene: 187735454

Centisome position: 42.57

GC content: 53.62

Gene sequence:

>759_bases
ATGAAGAAAACATTGATAATCATTGCGTCCCTGGCTCTTGGCGCGGCGGCTTCCCAGGCCGCGGTGCTGTGTACCACTAC
GTTTAACCGAACCGGGACTTCCCTGGATACCGTCACTGTGAGTACGGTCTCCGATGCGGGACTCTCCACTTCCACCTCGA
TTGCTTCCGAGAATTTCAGCAAGAGCTCTGCGGGCAGTGACCTGCTGGCTTCAGGTTCTATTCCGGCCTCCGTATTCTCC
CCCAATTCCAACGTGGGTAATAATCAGAATAATACGTGGAGCGTTTCTTTCACGTTTACCAACGACGGCTCCCAGGATAT
GCTGATTTCTTCCATTGATCTTTCCATGATAGGGTTCAATGGGTCGGGCGCCGCGCAGAATGCCGGGGGCGGTGTGGCCA
ATAACAATTATGTTGGGGGAGCCAACGGCAATTTGAACAAACCTGTCAATATCACCCTTGGCATGAGCGGGCAGGAAAAT
CAGACGCTGGCCTATAATGGCGCCACCAGTACAAATACATCCACGGGATCCTGGGATGGCGTTCATACGGGAAGCTATGA
ATATGGCGATGTGTTGTTGAAAGCCGGGGAATCCATGACGTTAACTGTTACGGCTTCCAAAAACGAGGCCTACGGCAGCG
GCTGTTTTATCGGTCTTACTGGAATTCAGATTAATGGGGAAGTGGTTCCCGAACCCGCCACGGCCTCCCTGGGGCTTTTG
GGGCTGGCCGCATTGATGATGCGCCGCCGCAGACTCTGA

Upstream 100 bases:

>100_bases
ATGTATTTGTATAAACATCTCGTTTTTATCGTTTAGTGTTGACTTCGGATTAGGAATCCGCTAAACGGAAAAGGTTGACA
CCATTCAACCTTTCTCAGTT

Downstream 100 bases:

>100_bases
GTTTCGTGTCCCTGTATCATTTGTTCAAGCCGTCCGTTTTTCTTTAAAACTGGCGGCTTGTTCATTTTCTGCCGGCAAAA
TTCGGCATTTTTAACATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 252

Protein sequence:

>252_residues
MKKTLIIIASLALGAAASQAAVLCTTTFNRTGTSLDTVTVSTVSDAGLSTSTSIASENFSKSSAGSDLLASGSIPASVFS
PNSNVGNNQNNTWSVSFTFTNDGSQDMLISSIDLSMIGFNGSGAAQNAGGGVANNNYVGGANGNLNKPVNITLGMSGQEN
QTLAYNGATSTNTSTGSWDGVHTGSYEYGDVLLKAGESMTLTVTASKNEAYGSGCFIGLTGIQINGEVVPEPATASLGLL
GLAALMMRRRRL

Sequences:

>Translated_252_residues
MKKTLIIIASLALGAAASQAAVLCTTTFNRTGTSLDTVTVSTVSDAGLSTSTSIASENFSKSSAGSDLLASGSIPASVFS
PNSNVGNNQNNTWSVSFTFTNDGSQDMLISSIDLSMIGFNGSGAAQNAGGGVANNNYVGGANGNLNKPVNITLGMSGQEN
QTLAYNGATSTNTSTGSWDGVHTGSYEYGDVLLKAGESMTLTVTASKNEAYGSGCFIGLTGIQINGEVVPEPATASLGLL
GLAALMMRRRRL
>Mature_252_residues
MKKTLIIIASLALGAAASQAAVLCTTTFNRTGTSLDTVTVSTVSDAGLSTSTSIASENFSKSSAGSDLLASGSIPASVFS
PNSNVGNNQNNTWSVSFTFTNDGSQDMLISSIDLSMIGFNGSGAAQNAGGGVANNNYVGGANGNLNKPVNITLGMSGQEN
QTLAYNGATSTNTSTGSWDGVHTGSYEYGDVLLKAGESMTLTVTASKNEAYGSGCFIGLTGIQINGEVVPEPATASLGLL
GLAALMMRRRRL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25534; Mature: 25534

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTLIIIASLALGAAASQAAVLCTTTFNRTGTSLDTVTVSTVSDAGLSTSTSIASENFS
CCCEEEEEEEEHHCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHCCCC
KSSAGSDLLASGSIPASVFSPNSNVGNNQNNTWSVSFTFTNDGSQDMLISSIDLSMIGFN
CCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEC
GSGAAQNAGGGVANNNYVGGANGNLNKPVNITLGMSGQENQTLAYNGATSTNTSTGSWDG
CCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC
VHTGSYEYGDVLLKAGESMTLTVTASKNEAYGSGCFIGLTGIQINGEVVPEPATASLGLL
EECCCCCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEEEECCEECCCCCCHHHHHH
GLAALMMRRRRL
HHHHHHHHHHCC
>Mature Secondary Structure
MKKTLIIIASLALGAAASQAAVLCTTTFNRTGTSLDTVTVSTVSDAGLSTSTSIASENFS
CCCEEEEEEEEHHCCCCCCEEEEEEEECCCCCCEEEEEEEEEECCCCCCCCCHHHHCCCC
KSSAGSDLLASGSIPASVFSPNSNVGNNQNNTWSVSFTFTNDGSQDMLISSIDLSMIGFN
CCCCCCCEEECCCCCCEEECCCCCCCCCCCCEEEEEEEEECCCCCCEEEEEEEEEEEEEC
GSGAAQNAGGGVANNNYVGGANGNLNKPVNITLGMSGQENQTLAYNGATSTNTSTGSWDG
CCCCCCCCCCCCCCCCEECCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCC
VHTGSYEYGDVLLKAGESMTLTVTASKNEAYGSGCFIGLTGIQINGEVVPEPATASLGLL
EECCCCCCCEEEEECCCEEEEEEEECCCCCCCCEEEEEEEEEEECCEECCCCCCHHHHHH
GLAALMMRRRRL
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA