Definition | Akkermansia muciniphila ATCC BAA-835, complete genome. |
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Accession | NC_010655 |
Length | 2,664,102 |
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The map label for this gene is ppk [H]
Identifier: 187735439
GI number: 187735439
Start: 1116331
End: 1118418
Strand: Direct
Name: ppk [H]
Synonym: Amuc_0938
Alternate gene names: 187735439
Gene position: 1116331-1118418 (Clockwise)
Preceding gene: 187735438
Following gene: 187735446
Centisome position: 41.9
GC content: 59.63
Gene sequence:
>2088_bases ATGTCTGACGAATATATCAACAGAGAACTTTCCTGGCTGGAATTCAACCAGCGTGTGCTGGACCAGGCCGTAAGAACGGA TCTTCCCCTCCTGGAACGCCTGAAGTTTCTGGCTATTACCGCCTCCAACCTGGATGAGTTTTTCATGGTGCGCGTGGGCG GCCTTCAGATGCTGCGGCATTCCGGTTCCCGCGTGAAGGATATTTCCGGGCTGACGCCCACCCGCCAGCTGAAAGCCATC CGCTCCCGCGTGGGCCGCATGATTGAGGACCAATACCGCCTGTTCCATGAGGAAATTCTGCCGTGGATGGAAATCAACGG CATCAATCCCCTGGCGATGGAGGATCTCAGCACTTCCCAGAAATTGACGCTGGAGCAGTATTTCAACAACCAGATATTCC CGCTTCTGACGCCGCTGGACATGGATGCTCCGGAAGCTCCCGCGCTGCCATCCCTCAAGCTGCTGATGGGCGTGGAACTG CGCGACAATGAGACCGGGGAGGTGCGCTCCGCCGTGGTGGCCCTTCCGGACGGCCTGCCGCGGCGCGTTCCCGTCCCTTC CGCGGAGGCGGAGCGCTACGTGATGCTGGAGGACCTGGTCCGGGAGTGCATCGGCACCGTTTTTCCCGGTGAGACCGTTC TTTCCGCAGCGGTGTTCCGCGTCACGCGCAATGGGGACATTGCCGTGCAGGAGGAAGACGCCCTGGACCTGGCGGATGAG ATGGAGGAAGTGCTCGTAGCCCGGAAATTTTCCGAATGCGTGAGGCTGGAAGTAGAGTCCTCCGCGCCCGCCCCCCTGCA TGACAAGATCATGCGGATTGTAGGCGCCGGGAAGGAGGAGACTTATGACCTCAAGGGTCCCCTGATGCTTTCCGACTTCA TGGAAATGGCTTTTGCCCCCGGCAATGACCAGTTGAAGGTGGAGCAGTGGTCCCCGCAGCCGTCCCCTTCCGTGAATCCG GCCGTCAGCATTTTTGAAAACATTGCCGGCGGGGACATTCTGCTCAATCATCCCTATGAAAGTTTTGAACCCGTCCTGCG CCTGGTGGAGGAGGCAGCGGAAGATCCGGACGTCATCGCCATCAAGCAGGTGCTGTACCGTACCGCCAGGAACTCCCGCA TCGTGGCCGCCCTGAAAAAAGCGGCGGAGAGCGGCAAGCAGGTGACGGCGCTGGTGGAGCTGAAAGCCCGTTTTGACGAG GCCCGCAATCTGGAAAAGGCGGAGGAGCTTCAGCGTTCCGGCGTGCAGGTTGTTTACGGCGTCAAGGGGTTGAAGACCCA TGCCAAGATTTGCCTGGTGGTGCGCCGGGAACAGGGCATGCTGCGGCGTTACTGCCATTTCGGCACGGGGAACTACAATG AGACCACTGCCAAGATTTACACGGATATTTCCTACCTTACCTGCGACGACCAGCTGGGAGCGGACGCTTCCCAGTTCTTC AATTCCGTGACGGGGCGCACCAAGCTCATGCGCTTCCGCAAGCTGTATCCCTCCCCGGTGTTGATGAAGGCGCGCCTTAT TGAACTTATTGAAGGGGAAGCGGAACGCGCGCGGCAGGGGGAACCCGCCCGCATTTCCGCCAAAATGAACAGCCTCCAGG ACGTGGAAATCATTGACGCCCTGTACAGGGCCGCGGACGCCGGGGTGGACATTGAACTGAACGTGCGCGGCATTTGCTGC CTGAAAACGGGCCCCCGGCCCAACGGCAAGGTAATCCGCGTGGTCAGTATCGTGGACAGGTATCTGGAGCACGCGCGCAT TTTCTTTTTCCACCACGGCGGCAACCACCAGCTTTTCATCGCCAGTGCGGACTGGATGACCCGGAATCTGGATAAAAGGG TGGAGCTTATGGTGCCCGTCACCAACGGGAAGCTGGCGCGCCGCCTGAAATCCATTCTGGACGCCTGCTTCAGGGACAAT GTCCAGGCCTGCAATATTCTGCCGGACGGCACTTCCGAACATGTCGTCCGGAAAAAGGGTCAGAAAGCCTTCCGTTTGCA GCAGTACCTGACCAAGGAGGCGCGCCGCCTGGCCAAGGACAAGGAACGGGAACGCCAGCAGATGCTGGAACCGCACACGC CGCATTAA
Upstream 100 bases:
>100_bases GGCTGAAGGGCGACCTGTTTGCGGATATCTTCGGTTATGACGTCGTGCTGGCGCCCCAGCGGTAGGCTGATTTAAAAAAC TTCCATTTTCCATTTTTCCC
Downstream 100 bases:
>100_bases AGGCGCTCATCACGGGCGTTTGAAGGTCCGCCGGGAACAGTCTCCGGAGTACGCCGGTTTTCCGGCCGTCTGCGGAGGCT GCCCATGTTTCCCGGAGAGG
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 695; Mature: 694
Protein sequence:
>695_residues MSDEYINRELSWLEFNQRVLDQAVRTDLPLLERLKFLAITASNLDEFFMVRVGGLQMLRHSGSRVKDISGLTPTRQLKAI RSRVGRMIEDQYRLFHEEILPWMEINGINPLAMEDLSTSQKLTLEQYFNNQIFPLLTPLDMDAPEAPALPSLKLLMGVEL RDNETGEVRSAVVALPDGLPRRVPVPSAEAERYVMLEDLVRECIGTVFPGETVLSAAVFRVTRNGDIAVQEEDALDLADE MEEVLVARKFSECVRLEVESSAPAPLHDKIMRIVGAGKEETYDLKGPLMLSDFMEMAFAPGNDQLKVEQWSPQPSPSVNP AVSIFENIAGGDILLNHPYESFEPVLRLVEEAAEDPDVIAIKQVLYRTARNSRIVAALKKAAESGKQVTALVELKARFDE ARNLEKAEELQRSGVQVVYGVKGLKTHAKICLVVRREQGMLRRYCHFGTGNYNETTAKIYTDISYLTCDDQLGADASQFF NSVTGRTKLMRFRKLYPSPVLMKARLIELIEGEAERARQGEPARISAKMNSLQDVEIIDALYRAADAGVDIELNVRGICC LKTGPRPNGKVIRVVSIVDRYLEHARIFFFHHGGNHQLFIASADWMTRNLDKRVELMVPVTNGKLARRLKSILDACFRDN VQACNILPDGTSEHVVRKKGQKAFRLQQYLTKEARRLAKDKERERQQMLEPHTPH
Sequences:
>Translated_695_residues MSDEYINRELSWLEFNQRVLDQAVRTDLPLLERLKFLAITASNLDEFFMVRVGGLQMLRHSGSRVKDISGLTPTRQLKAI RSRVGRMIEDQYRLFHEEILPWMEINGINPLAMEDLSTSQKLTLEQYFNNQIFPLLTPLDMDAPEAPALPSLKLLMGVEL RDNETGEVRSAVVALPDGLPRRVPVPSAEAERYVMLEDLVRECIGTVFPGETVLSAAVFRVTRNGDIAVQEEDALDLADE MEEVLVARKFSECVRLEVESSAPAPLHDKIMRIVGAGKEETYDLKGPLMLSDFMEMAFAPGNDQLKVEQWSPQPSPSVNP AVSIFENIAGGDILLNHPYESFEPVLRLVEEAAEDPDVIAIKQVLYRTARNSRIVAALKKAAESGKQVTALVELKARFDE ARNLEKAEELQRSGVQVVYGVKGLKTHAKICLVVRREQGMLRRYCHFGTGNYNETTAKIYTDISYLTCDDQLGADASQFF NSVTGRTKLMRFRKLYPSPVLMKARLIELIEGEAERARQGEPARISAKMNSLQDVEIIDALYRAADAGVDIELNVRGICC LKTGPRPNGKVIRVVSIVDRYLEHARIFFFHHGGNHQLFIASADWMTRNLDKRVELMVPVTNGKLARRLKSILDACFRDN VQACNILPDGTSEHVVRKKGQKAFRLQQYLTKEARRLAKDKERERQQMLEPHTPH >Mature_694_residues SDEYINRELSWLEFNQRVLDQAVRTDLPLLERLKFLAITASNLDEFFMVRVGGLQMLRHSGSRVKDISGLTPTRQLKAIR SRVGRMIEDQYRLFHEEILPWMEINGINPLAMEDLSTSQKLTLEQYFNNQIFPLLTPLDMDAPEAPALPSLKLLMGVELR DNETGEVRSAVVALPDGLPRRVPVPSAEAERYVMLEDLVRECIGTVFPGETVLSAAVFRVTRNGDIAVQEEDALDLADEM EEVLVARKFSECVRLEVESSAPAPLHDKIMRIVGAGKEETYDLKGPLMLSDFMEMAFAPGNDQLKVEQWSPQPSPSVNPA VSIFENIAGGDILLNHPYESFEPVLRLVEEAAEDPDVIAIKQVLYRTARNSRIVAALKKAAESGKQVTALVELKARFDEA RNLEKAEELQRSGVQVVYGVKGLKTHAKICLVVRREQGMLRRYCHFGTGNYNETTAKIYTDISYLTCDDQLGADASQFFN SVTGRTKLMRFRKLYPSPVLMKARLIELIEGEAERARQGEPARISAKMNSLQDVEIIDALYRAADAGVDIELNVRGICCL KTGPRPNGKVIRVVSIVDRYLEHARIFFFHHGGNHQLFIASADWMTRNLDKRVELMVPVTNGKLARRLKSILDACFRDNV QACNILPDGTSEHVVRKKGQKAFRLQQYLTKEARRLAKDKERERQQMLEPHTPH
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=682, Percent_Identity=33.5777126099707, Blast_Score=363, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 78523; Mature: 78392
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDEYINRELSWLEFNQRVLDQAVRTDLPLLERLKFLAITASNLDEFFMVRVGGLQMLRH CCCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHC SGSRVKDISGLTPTRQLKAIRSRVGRMIEDQYRLFHEEILPWMEINGINPLAMEDLSTSQ CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCH KLTLEQYFNNQIFPLLTPLDMDAPEAPALPSLKLLMGVELRDNETGEVRSAVVALPDGLP HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCEECCCCCCHHHHHHEECCCCCC RRVPVPSAEAERYVMLEDLVRECIGTVFPGETVLSAAVFRVTRNGDIAVQEEDALDLADE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCEEEECCCHHHHHHH MEEVLVARKFSECVRLEVESSAPAPLHDKIMRIVGAGKEETYDLKGPLMLSDFMEMAFAP HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC GNDQLKVEQWSPQPSPSVNPAVSIFENIAGGDILLNHPYESFEPVLRLVEEAAEDPDVIA CCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHH IKQVLYRTARNSRIVAALKKAAESGKQVTALVELKARFDEARNLEKAEELQRSGVQVVYG HHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEE VKGLKTHAKICLVVRREQGMLRRYCHFGTGNYNETTAKIYTDISYLTCDDQLGADASQFF CCCHHCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHH NSVTGRTKLMRFRKLYPSPVLMKARLIELIEGEAERARQGEPARISAKMNSLQDVEIIDA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHCCCCHHHHHHH LYRAADAGVDIELNVRGICCLKTGPRPNGKVIRVVSIVDRYLEHARIFFFHHGGNHQLFI HHHHHCCCCEEEEECCEEEEEECCCCCCCCEEHHHHHHHHHHHCCEEEEEEECCCEEEEE ASADWMTRNLDKRVELMVPVTNGKLARRLKSILDACFRDNVQACNILPDGTSEHVVRKKG EECCHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCC QKAFRLQQYLTKEARRLAKDKERERQQMLEPHTPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SDEYINRELSWLEFNQRVLDQAVRTDLPLLERLKFLAITASNLDEFFMVRVGGLQMLRH CCHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEECCCCHHHHHHHHHHHHHHHC SGSRVKDISGLTPTRQLKAIRSRVGRMIEDQYRLFHEEILPWMEINGINPLAMEDLSTSQ CCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCCCH KLTLEQYFNNQIFPLLTPLDMDAPEAPALPSLKLLMGVELRDNETGEVRSAVVALPDGLP HHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHCCCEECCCCCCHHHHHHEECCCCCC RRVPVPSAEAERYVMLEDLVRECIGTVFPGETVLSAAVFRVTRNGDIAVQEEDALDLADE CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHEECCCCEEEECCCHHHHHHH MEEVLVARKFSECVRLEVESSAPAPLHDKIMRIVGAGKEETYDLKGPLMLSDFMEMAFAP HHHHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCC GNDQLKVEQWSPQPSPSVNPAVSIFENIAGGDILLNHPYESFEPVLRLVEEAAEDPDVIA CCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHCCCCCHHH IKQVLYRTARNSRIVAALKKAAESGKQVTALVELKARFDEARNLEKAEELQRSGVQVVYG HHHHHHHHHCCCHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCHHHHHHHHHCCCEEEEE VKGLKTHAKICLVVRREQGMLRRYCHFGTGNYNETTAKIYTDISYLTCDDQLGADASQFF CCCHHCCCEEEEEEEHHHHHHHHHHHCCCCCCCCCCCEEEECCEEEEECCCCCCCHHHHH NSVTGRTKLMRFRKLYPSPVLMKARLIELIEGEAERARQGEPARISAKMNSLQDVEIIDA HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCEEEHHHCCCCHHHHHHH LYRAADAGVDIELNVRGICCLKTGPRPNGKVIRVVSIVDRYLEHARIFFFHHGGNHQLFI HHHHHCCCCEEEEECCEEEEEECCCCCCCCEEHHHHHHHHHHHCCEEEEEEECCCEEEEE ASADWMTRNLDKRVELMVPVTNGKLARRLKSILDACFRDNVQACNILPDGTSEHVVRKKG EECCHHHHCCCCEEEEEEEECCCHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCC QKAFRLQQYLTKEARRLAKDKERERQQMLEPHTPH HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12835416 [H]