| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is dsbD [C]
Identifier: 183220342
GI number: 183220342
Start: 970934
End: 971755
Strand: Reverse
Name: dsbD [C]
Synonym: LEPBI_I0938
Alternate gene names: 183220342
Gene position: 971755-970934 (Counterclockwise)
Preceding gene: 183220345
Following gene: 183220337
Centisome position: 27.0
GC content: 33.7
Gene sequence:
>822_bases ATGTTTCGATTTAGTTTACTCCTCATCTCTTTCCTATTTGGTTCGATTCTTTCGGCTGACTCCAATTGGGGTAATTCCAT CCAGAAGGGATTTGAAACCGCCAAACAAGAAAAAAAATTCATCATCGTCGATGTGTTTGCAGATTGGTGTACCTATTGTA TGGTTTTGGAAAAAGAGATATTCCCTGATCCTGAGGTAAGTCGTATTTTAGACCAATTTGTACGTGTTAGATTAGATGGA GAAGAATTCCCCAATTTGCGGAAAAAATACAATGTAGAAGGTTATCCCACGATTCTGTTTTTAGATGGAGAGGGAAATTT TGTGACAAAAATCACAGGACTCGCAACGAAAGAAGATATATTGATCCTTTCCAAAAGAATCTTACAAGAACCAAATTTAG AATCTTTTTTGAAAACAGAGATGAGAAAGGATAAAGAAAACCCAAACTTACATTTTCGATTGGGTTTATTGTACTTTCAA TCTAAAGAATATACAAAAGCAGAAGAACAATTCATCTCTTCCATTCAAAAGTCAAAACAACTCCCTATCGTGAAAGAAAA TTCTTATTTTAATTTAAACCTAATTCGATCCGTCAATGGACCAAAAGAATTAGCAGTAACTTCTTGGAAAGAATTCATCC AACTTTATCCAAATTCAAAACGATTGATCACAGCTAAATTGTATTATGGAATCAGTTTGAAAGAAAGTGGCGACTTCAAA CATGCAAAGACGATCTTAAAAGAAATCCAACCAAAACTAGAATCCGAATCAGACCAATTGATTTGTAAAGAAACCTTAGA ACAAATCGAAAAAGGATTTTAA
Upstream 100 bases:
>100_bases TTTCGTTTGCCTTCTAACTACCATGGAAACGGCCCTTTCTATTTTCAAAAAGCGAAAATTGGTTGTGGCTTCACCTCGAA TTAGGGTAGAATCAGATTGA
Downstream 100 bases:
>100_bases AGCAAAATGTAAGTTCCGGCAAACGAATGTTTGCCGGGAAACTTTACCGATTCCCGATCGAATAGTAAGTAAACCCAATT TCTTGCATCAAATTTGGTTT
Product: putative protein-disulfide reductase
Products: DsbDoxidized; DsbGreduced [C]
Alternate protein names: Thiol Disulfide Interchange Protein DsbD Like Protein; Thiol-Disulfide Interchange Like Protein; Peptidylprolyl Isomerase FKBP-Type; Thioredoxin Domain-Containing Protein; TPR Repeat-Containing Protein; Protein-Disulfide Reductase; ThiolDisulfide Interchange Protein; Thioredoxin Domain; Disulphide-Isomerase; Thiol-Disulfide Interchange Protein DsbD-Like Protein
Number of amino acids: Translated: 273; Mature: 273
Protein sequence:
>273_residues MFRFSLLLISFLFGSILSADSNWGNSIQKGFETAKQEKKFIIVDVFADWCTYCMVLEKEIFPDPEVSRILDQFVRVRLDG EEFPNLRKKYNVEGYPTILFLDGEGNFVTKITGLATKEDILILSKRILQEPNLESFLKTEMRKDKENPNLHFRLGLLYFQ SKEYTKAEEQFISSIQKSKQLPIVKENSYFNLNLIRSVNGPKELAVTSWKEFIQLYPNSKRLITAKLYYGISLKESGDFK HAKTILKEIQPKLESESDQLICKETLEQIEKGF
Sequences:
>Translated_273_residues MFRFSLLLISFLFGSILSADSNWGNSIQKGFETAKQEKKFIIVDVFADWCTYCMVLEKEIFPDPEVSRILDQFVRVRLDG EEFPNLRKKYNVEGYPTILFLDGEGNFVTKITGLATKEDILILSKRILQEPNLESFLKTEMRKDKENPNLHFRLGLLYFQ SKEYTKAEEQFISSIQKSKQLPIVKENSYFNLNLIRSVNGPKELAVTSWKEFIQLYPNSKRLITAKLYYGISLKESGDFK HAKTILKEIQPKLESESDQLICKETLEQIEKGF >Mature_273_residues MFRFSLLLISFLFGSILSADSNWGNSIQKGFETAKQEKKFIIVDVFADWCTYCMVLEKEIFPDPEVSRILDQFVRVRLDG EEFPNLRKKYNVEGYPTILFLDGEGNFVTKITGLATKEDILILSKRILQEPNLESFLKTEMRKDKENPNLHFRLGLLYFQ SKEYTKAEEQFISSIQKSKQLPIVKENSYFNLNLIRSVNGPKELAVTSWKEFIQLYPNSKRLITAKLYYGISLKESGDFK HAKTILKEIQPKLESESDQLICKETLEQIEKGF
Specific function: Required To Facilitate The Formation Of Correct Disulfide Bonds In Some Periplasmic Proteins And For The Assembly Of The Periplasmic C-Type Cytochromes. Acts By Transferring Electrons From Cytoplasmic Thioredoxin To The Periplasm, Thereby Maintaining The
COG id: COG4232
COG function: function code OC; Thiol:disulfide interchange protein
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 1.8.1.8 [C]
Molecular weight: Translated: 31769; Mature: 31769
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRFSLLLISFLFGSILSADSNWGNSIQKGFETAKQEKKFIIVDVFADWCTYCMVLEKEI CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHC FPDPEVSRILDQFVRVRLDGEEFPNLRKKYNVEGYPTILFLDGEGNFVTKITGLATKEDI CCCCHHHHHHHHHHHEEECCHHCCCHHHHCCCCCCCEEEEECCCCCEEEEEECCCCHHHH LILSKRILQEPNLESFLKTEMRKDKENPNLHFRLGLLYFQSKEYTKAEEQFISSIQKSKQ HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCC LPIVKENSYFNLNLIRSVNGPKELAVTSWKEFIQLYPNSKRLITAKLYYGISLKESGDFK CCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHH HAKTILKEIQPKLESESDQLICKETLEQIEKGF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MFRFSLLLISFLFGSILSADSNWGNSIQKGFETAKQEKKFIIVDVFADWCTYCMVLEKEI CHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHC FPDPEVSRILDQFVRVRLDGEEFPNLRKKYNVEGYPTILFLDGEGNFVTKITGLATKEDI CCCCHHHHHHHHHHHEEECCHHCCCHHHHCCCCCCCEEEEECCCCCEEEEEECCCCHHHH LILSKRILQEPNLESFLKTEMRKDKENPNLHFRLGLLYFQSKEYTKAEEQFISSIQKSKQ HHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEEECCCCCHHHHHHHHHHHHHCC LPIVKENSYFNLNLIRSVNGPKELAVTSWKEFIQLYPNSKRLITAKLYYGISLKESGDFK CCEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEECCCCCHH HAKTILKEIQPKLESESDQLICKETLEQIEKGF HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DsbGoxidized; DsbDreduced/thiol:disulfide reductase [C]
Specific reaction: DsbDreduced/thiol:disulfide reductase + DsbCoxidized = DsbDoxidized + DsbCreduced DsbGoxidized + DsbDreduced/thiol:disulfide reductase = DsbGreduced + DsbDoxidized [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA