| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220337
Identifier: 183220337
GI number: 183220337
Start: 965477
End: 967030
Strand: Reverse
Name: 183220337
Synonym: LEPBI_I0933
Alternate gene names: NA
Gene position: 967030-965477 (Counterclockwise)
Preceding gene: 183220342
Following gene: 183220328
Centisome position: 26.86
GC content: 39.7
Gene sequence:
>1554_bases GTGGATTGGCAGAAAATTGCGCTCATTTTGTGGTTTATCTTCGTACAGTCATTGTTTGCTGGCGAAAAATTGCCAAAAGA CGTTTCTGTAGAGACACTCCTAAAACGGGGGTTTTCTCCAAAACTTGTGGCCATTTGGAAACAAAAGACCCAAGGCACAA GAGAGGATTTTTTCTTATGGAAACGAAACCTCCGGGGCAAGGAAGCATCCCTCGTGGCAAAATTGTGGAAGGAGGAGGCA TTGAGTTACCCACCAGCCAAACAAAGATTGGGAAAGGCAGAAGGGAATCGAAACCAATCGATGGCAAATCGAACTTCAGA TCCCGGTTCTCTGTCTCCTGATCCATTTTTGGGAGAGTATTGGTTTGTGGGTCTATCCCATCAAAATTTGGATGTTCAGT ATTTGCCTAGAGAAGAAAAAAACCATTCTGCCATTTCTCTCGGAGGGTTCCAAAAAGGACAAAGGTTTGTCTTTGAAAAA CGAGATGATGAGTTTTTGTATGGATTGGATCTCGTAAAAAATTCCTATCGCCTCACTTCCGGGAATCGTTACAAACCAAT CCCCCACTTTTACTTTGCAAAAGATCCAAATTTTTATTCGCAGATGGACAGGCCAAACTCACCTCTCCCGCAACCTCTAC AAAGTTCCCATTTTTTTGGTTCTCAATTTCCAATGGAAGGTAAACACTTAGAGTTTGGAATTTACTCGGCACCTGGATTT TCAGCCTATCCAGGGATTTACTACGTTTCACCAAACAAATCTTATTCGGGCGTTTGGTCTCCTGGCGAAAACAAATCTAG TTTTTTTATAAACGATTTCTTTGACTTACAAAACGGGGGGAAACACCGCGTTCAATCTGAATCCATCTTCCATCCAAAAG AATCAGTTGGTTTTTTTTATTCCAAATCGGAAATGAATGATTCCTCCATTTTTTTCGATTCTACTTTGTATCGAGACTCT CCTCTATTGTATGGGAATCTAAGCATCGGCGAAAACCGTCCAGAAATTCCACAAACATTAGGTTATATGAGAGGAAGTTA CAAACATTTATTAGGTGGAGAAACATTGTCTTCGATGGATGGGCATCGTTATGAAAGGGGAGTCTCTGGATTTTTTCCCC TCTTCGTGTCGGATCTTGGAAATATCATTTATCGATACCGAGAGTATAATGAATCAGGGAATTACAATTTCAATGAAATT GGAAGAGCCATCTTTTATGAATGGAGAAAAGATCGAACGGTTTGTTCCGTAGGTTTTGAATCGAGAGATTTAGGTGGCCA ATGGGAAGGAAAAATCGCAATCCCCATTTATTTAGGTCAACTTTTGGAACTCAGTGCCATACTAAGAGAAGGAAATCTGA AAACCAGGGCTTGGTTTGAAAATTGGACTTATGCTTCTGATTTTAATATCAATTTAACAGACAGGGAGGAAATCATCAAA ATCAAATATGTGAGCCACTTTCTTTCACTGAATGTAAGTTATTCGGAAAAAGAAAATATGCCCGCACCGATAGTATTCAT CAATTTTCAATTTTTACATCTCTTCGAAATTTAG
Upstream 100 bases:
>100_bases GATGGAATTTTTTTTTCGCCCTACTCTAGAATATGTCCCTTTTTGAAAAAAAAGCAAACGGAATGAGGGAAAAAAAGAAC AAATTCTGACCCCAATCCTG
Downstream 100 bases:
>100_bases TATAATAAATCGTCCGTCCTGATCTCAGCGTATTCTTTTAATTGAAAAATGGGAATGGTTTGTTTTTCGACGATTTCATT TTTATCTCCAGGGAGTTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 517; Mature: 517
Protein sequence:
>517_residues MDWQKIALILWFIFVQSLFAGEKLPKDVSVETLLKRGFSPKLVAIWKQKTQGTREDFFLWKRNLRGKEASLVAKLWKEEA LSYPPAKQRLGKAEGNRNQSMANRTSDPGSLSPDPFLGEYWFVGLSHQNLDVQYLPREEKNHSAISLGGFQKGQRFVFEK RDDEFLYGLDLVKNSYRLTSGNRYKPIPHFYFAKDPNFYSQMDRPNSPLPQPLQSSHFFGSQFPMEGKHLEFGIYSAPGF SAYPGIYYVSPNKSYSGVWSPGENKSSFFINDFFDLQNGGKHRVQSESIFHPKESVGFFYSKSEMNDSSIFFDSTLYRDS PLLYGNLSIGENRPEIPQTLGYMRGSYKHLLGGETLSSMDGHRYERGVSGFFPLFVSDLGNIIYRYREYNESGNYNFNEI GRAIFYEWRKDRTVCSVGFESRDLGGQWEGKIAIPIYLGQLLELSAILREGNLKTRAWFENWTYASDFNINLTDREEIIK IKYVSHFLSLNVSYSEKENMPAPIVFINFQFLHLFEI
Sequences:
>Translated_517_residues MDWQKIALILWFIFVQSLFAGEKLPKDVSVETLLKRGFSPKLVAIWKQKTQGTREDFFLWKRNLRGKEASLVAKLWKEEA LSYPPAKQRLGKAEGNRNQSMANRTSDPGSLSPDPFLGEYWFVGLSHQNLDVQYLPREEKNHSAISLGGFQKGQRFVFEK RDDEFLYGLDLVKNSYRLTSGNRYKPIPHFYFAKDPNFYSQMDRPNSPLPQPLQSSHFFGSQFPMEGKHLEFGIYSAPGF SAYPGIYYVSPNKSYSGVWSPGENKSSFFINDFFDLQNGGKHRVQSESIFHPKESVGFFYSKSEMNDSSIFFDSTLYRDS PLLYGNLSIGENRPEIPQTLGYMRGSYKHLLGGETLSSMDGHRYERGVSGFFPLFVSDLGNIIYRYREYNESGNYNFNEI GRAIFYEWRKDRTVCSVGFESRDLGGQWEGKIAIPIYLGQLLELSAILREGNLKTRAWFENWTYASDFNINLTDREEIIK IKYVSHFLSLNVSYSEKENMPAPIVFINFQFLHLFEI >Mature_517_residues MDWQKIALILWFIFVQSLFAGEKLPKDVSVETLLKRGFSPKLVAIWKQKTQGTREDFFLWKRNLRGKEASLVAKLWKEEA LSYPPAKQRLGKAEGNRNQSMANRTSDPGSLSPDPFLGEYWFVGLSHQNLDVQYLPREEKNHSAISLGGFQKGQRFVFEK RDDEFLYGLDLVKNSYRLTSGNRYKPIPHFYFAKDPNFYSQMDRPNSPLPQPLQSSHFFGSQFPMEGKHLEFGIYSAPGF SAYPGIYYVSPNKSYSGVWSPGENKSSFFINDFFDLQNGGKHRVQSESIFHPKESVGFFYSKSEMNDSSIFFDSTLYRDS PLLYGNLSIGENRPEIPQTLGYMRGSYKHLLGGETLSSMDGHRYERGVSGFFPLFVSDLGNIIYRYREYNESGNYNFNEI GRAIFYEWRKDRTVCSVGFESRDLGGQWEGKIAIPIYLGQLLELSAILREGNLKTRAWFENWTYASDFNINLTDREEIIK IKYVSHFLSLNVSYSEKENMPAPIVFINFQFLHLFEI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59821; Mature: 59821
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWQKIALILWFIFVQSLFAGEKLPKDVSVETLLKRGFSPKLVAIWKQKTQGTREDFFLW CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEHHCCCCHHHHHHH KRNLRGKEASLVAKLWKEEALSYPPAKQRLGKAEGNRNQSMANRTSDPGSLSPDPFLGEY HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCE WFVGLSHQNLDVQYLPREEKNHSAISLGGFQKGQRFVFEKRDDEFLYGLDLVKNSYRLTS EEEEECCCCCCEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEHHHHCCCEEECC GNRYKPIPHFYFAKDPNFYSQMDRPNSPLPQPLQSSHFFGSQFPMEGKHLEFGIYSAPGF CCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC SAYPGIYYVSPNKSYSGVWSPGENKSSFFINDFFDLQNGGKHRVQSESIFHPKESVGFFY CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCHHHCCEEE SKSEMNDSSIFFDSTLYRDSPLLYGNLSIGENRPEIPQTLGYMRGSYKHLLGGETLSSMD ECCCCCCCEEEEECEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCHHHHCC GHRYERGVSGFFPLFVSDLGNIIYRYREYNESGNYNFNEIGRAIFYEWRKDRTVCSVGFE CHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC SRDLGGQWEGKIAIPIYLGQLLELSAILREGNLKTRAWFENWTYASDFNINLTDREEIIK CCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEECCHHHEEE IKYVSHFLSLNVSYSEKENMPAPIVFINFQFLHLFEI HHEEEEHHHCCCCCCCCCCCCCCEEEEEEEEEEEECC >Mature Secondary Structure MDWQKIALILWFIFVQSLFAGEKLPKDVSVETLLKRGFSPKLVAIWKQKTQGTREDFFLW CCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCEEEEEEHHCCCCHHHHHHH KRNLRGKEASLVAKLWKEEALSYPPAKQRLGKAEGNRNQSMANRTSDPGSLSPDPFLGEY HHCCCCCHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCCE WFVGLSHQNLDVQYLPREEKNHSAISLGGFQKGQRFVFEKRDDEFLYGLDLVKNSYRLTS EEEEECCCCCCEEECCCCCCCCCEEEECCCCCCCEEEEECCCCCEEEEHHHHCCCEEECC GNRYKPIPHFYFAKDPNFYSQMDRPNSPLPQPLQSSHFFGSQFPMEGKHLEFGIYSAPGF CCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCC SAYPGIYYVSPNKSYSGVWSPGENKSSFFINDFFDLQNGGKHRVQSESIFHPKESVGFFY CCCCCEEEECCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCCHHHCCEEE SKSEMNDSSIFFDSTLYRDSPLLYGNLSIGENRPEIPQTLGYMRGSYKHLLGGETLSSMD ECCCCCCCEEEEECEEECCCCEEEEEEECCCCCCCHHHHHHHHCCCHHHHHCCCHHHHCC GHRYERGVSGFFPLFVSDLGNIIYRYREYNESGNYNFNEIGRAIFYEWRKDRTVCSVGFE CHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC SRDLGGQWEGKIAIPIYLGQLLELSAILREGNLKTRAWFENWTYASDFNINLTDREEIIK CCCCCCCCCCCEEEHHHHHHHHHHHHHHHCCCCCEEEEECCCCEECCCEEEECCHHHEEE IKYVSHFLSLNVSYSEKENMPAPIVFINFQFLHLFEI HHEEEEHHHCCCCCCCCCCCCCCEEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA