Definition Clostridium perfringens str. 13, complete genome.
Accession NC_003366
Length 3,031,430

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The map label for this gene is ywrA [H]

Identifier: 18311230

GI number: 18311230

Start: 2579928

End: 2580497

Strand: Reverse

Name: ywrA [H]

Synonym: CPE2248

Alternate gene names: 18311230

Gene position: 2580497-2579928 (Counterclockwise)

Preceding gene: 18311231

Following gene: 18311229

Centisome position: 85.12

GC content: 28.25

Gene sequence:

>570_bases
ATGATACTAATTAGATTATTTTTAGAATTTTTTAAAGTTGGTCTTTTTGCCGTAGGCGGTGGAGCTGCTACTATACCATT
TCTATATAATATTTCAGATAAAACACATTGGTTTACTCATACTGATCTTGCAAACATGATTGCAATATCTCAATCAGTAC
CAGGTGCTATGGGAATCAATATGGCAACTTATGTTGGTTATGCAACTTATGGAGTTTTAGGTGCTATTACCTCAACCATA
GGTATTATAGTACCTTCAATAATTATAATTTTAATTGTAGCGAGAGTCTTAGCAAAATTTAAAGAAAATAAAAGAGTGGC
TGATTGTTTTTATGGATTAAGACCAGCATCAACAGGCCTTTTACTTGCTGCAGGCTTTGAAATAGTAAAAATATCAATAT
TAACTTTAAATAAATATGCAGAAACACATAATATTGCAGATATATTATCAATTAAAGCTTTAATACTAGCAGGAATTTTA
TTCTTTTTTATAAGAAAATATAAAAAGTCACCAATTTTTTATATTATTGCCTCAGCTATAGTAGGTATAATATTTAATTT
TGCTAAATAA

Upstream 100 bases:

>100_bases
GTAGCTGGATTTTCTATATTTACAGATATATCTCCTGTTTTATATGTAATAATAGCAGGAATAGCAGGAATAGTATTAAG
ATCAATTGGAGGTAAAAAGA

Downstream 100 bases:

>100_bases
TAAAGAAAAAATAAATAATAATTTAGAAGTAAAAGATATTTATTTTTTTAAAAGATAAAAGTATTAAAGAAACTTATTTT
AATAATAGGATTCTTTAATA

Product: chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGINMATYVGYATYGVLGAITSTI
GIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGLLLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGIL
FFFIRKYKKSPIFYIIASAIVGIIFNFAK

Sequences:

>Translated_189_residues
MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGINMATYVGYATYGVLGAITSTI
GIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGLLLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGIL
FFFIRKYKKSPIFYIIASAIVGIIFNFAK
>Mature_189_residues
MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGINMATYVGYATYGVLGAITSTI
GIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGLLLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGIL
FFFIRKYKKSPIFYIIASAIVGIIFNFAK

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 20616; Mature: 20616

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGIN
CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCH
MATYVGYATYGVLGAITSTIGIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE
LLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGILFFFIRKYKKSPIFYIIASAI
EEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGIIFNFAK
HHHHHHCCC
>Mature Secondary Structure
MILIRLFLEFFKVGLFAVGGGAATIPFLYNISDKTHWFTHTDLANMIAISQSVPGAMGIN
CHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCEEEHHHHHHHHHHHCCCCCCCCCH
MATYVGYATYGVLGAITSTIGIIVPSIIIILIVARVLAKFKENKRVADCFYGLRPASTGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCE
LLAAGFEIVKISILTLNKYAETHNIADILSIKALILAGILFFFIRKYKKSPIFYIIASAI
EEECCCEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
VGIIFNFAK
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]