Definition Xylella fastidiosa M23 chromosome, complete genome.
Accession NC_010577
Length 2,535,690

Click here to switch to the map view.

The map label for this gene is ppk [H]

Identifier: 182682584

GI number: 182682584

Start: 2329308

End: 2331404

Strand: Reverse

Name: ppk [H]

Synonym: XfasM23_2072

Alternate gene names: 182682584

Gene position: 2331404-2329308 (Counterclockwise)

Preceding gene: 182682585

Following gene: 182682583

Centisome position: 91.94

GC content: 51.65

Gene sequence:

>2097_bases
ATGTCTAAATCTTCTCCCATTGAACCTGTTTCAGCATCTGATGTCAGCCAGCAGTTCCGTGATCCTGGGCTGTATTTGAA
CAGGGAGCTATCACAGCTCGACTTCAATTTTCGAGTGTTGGCACAGGCATTGGATGAGCAGGTGCCGTTGTTAGAGCGGT
TGCGCTTCCTGTGTATTTCTTGCACCAATCTGGATGAATTCTTCGAAATCCGTGTTGCTACCGTGCGCCATGCTCAGGAA
TTCGGTTTGCCGCCAGCGCCTGATGGGATGAGACCGACGGTAATCCTCAACGCTGTTCACGACCTGACAACCAAACTCGT
CCATGATCAGTACAACTGCTGGAACCAAGTGCTGTGTCCGGCACTTGCCTCCCTTGGAGTGGGTGTACTGAGTCATAACA
GTTGGAACGTGCGTCAGAAACGTTGGCTACGTGGTTACTTTCGCAACGAAATCATGCCGGTGTTATCGCCACTTGGTTTA
GATCCTGCGCATCCATTTCCGAAAATATTCAATAAAACCTTAAATATTGTGGTGGTACTTAACGGTATTGATGCTTTTGG
TCGTGCTGGTCATTTGGCTATCGTGCGTGCCCCGCGTTCGTTGCCGCGTATTATCGAGTTGCCCCAACATCTGTCCAGAG
ATGGCTCTCAAAACTTCGTCTTCTTGTCCTCAGTACTGTCTGCTTTTGTCGGTGAGTTGTTTCCTGGCATGGTGGTCAAG
GGGGCTTATCAATTTCGGGTTACTCGTAATTCTGAATTGGTGGTGGATGAGGATGAAGTCGAGAATCTGGCGCTGGCGTT
GCGTAATGAATTGGTGACCCGCGGTTATCGTCTTGCAGTCAGGTTAGAGATCGCTGAGGACTGCCCAATCCCGATTGTGC
GTACATTACTGCAGAATTTTGGGTTGCAAGAAAACGCTGTATATCGGATTAATGGTCCTGTCAATCTGAGCCGAGTGAGT
CAGGTCTATGACATGGTGTTGCGTCCGGAACTGAAATATCCCCCGTTCAATCCACGCACGGTGCGTAACAGTGATCACAT
TTTCGAGATCATTGCCAAGGGGGATGTGTTGTTGTACCACCCCTACGATGCTTTTACCGCAGTCCTTGATTTGCTGCGTC
AGGCGGCGGCTGACCCGGATGTACTGGCCATCAAACAAACCCTCTACCGTACCGGCAAGGATTCCACCATCGTTGATGCG
CTGATCCAAGCCGCACGTAGTGGCAAGGATGTCACTGTGGTGGTTGAGTTGCGCGCGCGTTTTGACGAGGAAGCCAACCT
CGGTTTGGCCGATAAGCTGCAGGAGGCTGGGGTACAAGTGGTCTATGGTGTGGTTGGTTACAAGACCCACGCCAAGATGT
TGCTGATTGTACGCCGTGAGGGCCGCAAACTACGTCGCTACGTGCATTTGGGCACTGGCAACTACCATAGTGGTACGGCA
CGGATATATACCGATTTGAGTTTGATGACGGCTAATGCGGCGATCGGTAAAGATGTGCATCAACTATTTCTGCAATTGTC
TGGATTAGCACCCAAAATGAAGCTGGAGTGCTTATTGCAGTCCCCATTCACCCTGCATGCAGGGGTGTTGTTCCGGATCG
AACGTGAGACCACGTTCGCCCGGAAGGGGTGCCCTGCCCGCATCGTTGCCAAGATGAATGCGCTGAATGAGCCACAGGTC
GTACGCGCACTGTACGTCGCCTCGCAGGCGGGTGTGCAAATTGATCTGATTGTGCGTGGGGCTTGCACGTTGCGGCCTGG
TGTGCAGGGTATATCCGAAAACATCCGCGTGCGTTCAATCGTCGGCCGCTTTTTGGAGCACAGCCGGGTGTATTGGTTTG
CTAATAACGGTACGCCTGAACTGTTCTGCGCCAGCGCCGATTGGTTGGAGCGCAATTTGCTACGTCGGGTCGAGATCTGT
TTCCCGATCTTGAATCCGGATTTGGCGAAACGTATTTATTCTGATGTTTTACAGAGTTACTTGGATGACAACCTCAATGC
TTGGGAATTGGGGAGTGATGGCGTTTACCGGAAACTGCTCCCCGAGACAGATCATGCGCCATACTCGGCCCAGGCGGCTC
TACTGGAGTCTTTATAG

Upstream 100 bases:

>100_bases
GAAATAATCCTTGCTCGTGTGGCGTGGATTTACTGTGGCCTCACTGTTGTTCCTTCCTACTTATATTTCTTTCCTAGTCT
CTTTTTTCTCAAGACGTTCT

Downstream 100 bases:

>100_bases
ATGTTGCTTTGCACTATGCCGGTGATGTTTACAGCGCTGGCGGGATTTTCAGTTAGAATATGCCCTCTATGCCCAATACG
TTGCCATCCTATCCCCCGCT

Product: polyphosphate kinase

Products: NA

Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]

Number of amino acids: Translated: 698; Mature: 697

Protein sequence:

>698_residues
MSKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRVATVRHAQE
FGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCPALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGL
DPAHPFPKIFNKTLNIVVVLNGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK
GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNFGLQENAVYRINGPVNLSRVS
QVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYHPYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDA
LIQAARSGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA
RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFARKGCPARIVAKMNALNEPQV
VRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSIVGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEIC
FPILNPDLAKRIYSDVLQSYLDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL

Sequences:

>Translated_698_residues
MSKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRVATVRHAQE
FGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCPALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGL
DPAHPFPKIFNKTLNIVVVLNGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK
GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNFGLQENAVYRINGPVNLSRVS
QVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYHPYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDA
LIQAARSGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA
RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFARKGCPARIVAKMNALNEPQV
VRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSIVGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEIC
FPILNPDLAKRIYSDVLQSYLDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL
>Mature_697_residues
SKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCISCTNLDEFFEIRVATVRHAQEF
GLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCPALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGLD
PAHPFPKIFNKTLNIVVVLNGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVKG
AYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNFGLQENAVYRINGPVNLSRVSQ
VYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYHPYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDAL
IQAARSGKDVTVVVELRARFDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTAR
IYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFARKGCPARIVAKMNALNEPQVV
RALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSIVGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEICF
PILNPDLAKRIYSDVLQSYLDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL

Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]

COG id: COG0855

COG function: function code P; Polyphosphate kinase

Gene ontology:

Cell location: Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyphosphate kinase family [H]

Homologues:

Organism=Escherichia coli, GI1788847, Length=694, Percent_Identity=34.0057636887608, Blast_Score=368, Evalue=1e-103,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003414 [H]

Pfam domain/function: PF02503 PP_kinase [H]

EC number: =2.7.4.1 [H]

Molecular weight: Translated: 78290; Mature: 78159

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCIS
CCCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH
CTNLDEFFEIRVATVRHAQEFGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGLDPAHPFPKIFNKTLNIVVVL
HHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEE
NGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK
ECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCEEC
GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNF
CCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHC
GLQENAVYRINGPVNLSRVSQVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYH
CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEC
PYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDALIQAARSGKDVTVVVELRAR
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECC
FDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA
CCCCCCCCHHHHHHHCCCEEEEHHHHHCCCCEEEEEEECCCHHEEHEEEECCCCCCCCCE
RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFA
EEEEEEHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEEEEECCHHHH
RKGCPARIVAKMNALNEPQVVRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSI
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCEECCCCHHHHHHCCHHHHH
VGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEICFPILNPDLAKRIYSDVLQSY
HHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL
HCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SKSSPIEPVSASDVSQQFRDPGLYLNRELSQLDFNFRVLAQALDEQVPLLERLRFLCIS
CCCCCCCCCCHHHHHHHHCCCCCEECCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHH
CTNLDEFFEIRVATVRHAQEFGLPPAPDGMRPTVILNAVHDLTTKLVHDQYNCWNQVLCP
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ALASLGVGVLSHNSWNVRQKRWLRGYFRNEIMPVLSPLGLDPAHPFPKIFNKTLNIVVVL
HHHHCCCHHEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCEEEEEEE
NGIDAFGRAGHLAIVRAPRSLPRIIELPQHLSRDGSQNFVFLSSVLSAFVGELFPGMVVK
ECCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHCCCCEEC
GAYQFRVTRNSELVVDEDEVENLALALRNELVTRGYRLAVRLEIAEDCPIPIVRTLLQNF
CCEEEEEECCCEEEECHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCHHHHHHHHHHC
GLQENAVYRINGPVNLSRVSQVYDMVLRPELKYPPFNPRTVRNSDHIFEIIAKGDVLLYH
CCCCCCEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCEECCCCCEEEEEECCCEEEEC
PYDAFTAVLDLLRQAAADPDVLAIKQTLYRTGKDSTIVDALIQAARSGKDVTVVVELRAR
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECC
FDEEANLGLADKLQEAGVQVVYGVVGYKTHAKMLLIVRREGRKLRRYVHLGTGNYHSGTA
CCCCCCCCHHHHHHHCCCEEEEHHHHHCCCCEEEEEEECCCHHEEHEEEECCCCCCCCCE
RIYTDLSLMTANAAIGKDVHQLFLQLSGLAPKMKLECLLQSPFTLHAGVLFRIERETTFA
EEEEEEHHEECCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEECCEEEEEECCHHHH
RKGCPARIVAKMNALNEPQVVRALYVASQAGVQIDLIVRGACTLRPGVQGISENIRVRSI
HCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEEEEECCEECCCCHHHHHHCCHHHHH
VGRFLEHSRVYWFANNGTPELFCASADWLERNLLRRVEICFPILNPDLAKRIYSDVLQSY
HHHHHHCCEEEEEECCCCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
LDDNLNAWELGSDGVYRKLLPETDHAPYSAQAALLESL
HCCCCCEEECCCCCHHHHHCCCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]