Definition | Xylella fastidiosa M23 chromosome, complete genome. |
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Accession | NC_010577 |
Length | 2,535,690 |
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The map label for this gene is nuoN [H]
Identifier: 182680818
GI number: 182680818
Start: 330951
End: 332408
Strand: Direct
Name: nuoN [H]
Synonym: XfasM23_0253
Alternate gene names: 182680818
Gene position: 330951-332408 (Clockwise)
Preceding gene: 182680817
Following gene: 182680822
Centisome position: 13.05
GC content: 49.38
Gene sequence:
>1458_bases ATGACCATGCCGACATCTGGGTTAAACATTGCCGATCTGGCTCCCTTGTTGCCGGAGCTAGTCCTTCTAGCTAGTACCTT TGCATTGTTGATGATCGATCTATTTATCGGTCAAGTGCGGAAGGTTTGGACGCATTTTCTTTCGGTTGCGATTTTGGTTG TTGTGTTGTCCATGTTAGTCGCCGGTGTTGGCGGGCAAGGTGCAGCGTTTCATGGGATGTTTGTGCGTGATAGCGCTGCC GATATGATGAAAGTAGTGATTGTCTTGGTCAGCGCCCTAAGTTTGGTTTACGGGTGGAGTTACTTGCGTGAGCGCAACTT GTTCCAGGGTGAAATTCCAGTGCTCGTGTTGTTTGCCACCTTGGGGATGATGGTCCTGGTGTCTGCGGGTCACTTGCTGA TGGTGTACCTGGGGCTTGAGCTGTTGGCGCTTTGTTCCTATGCGTTGGTTGCGGTCAATCGCGATAGCAAAATATCGACT GAGGCAGCGATGAAGTACATCGTGCTTGGTTCGTTGGCCTCTGGTTTGCTGTTATATGGAATGTCTTTGATTTATGGCGC CACTGGCACACTCAGTCTGCCTGGTATCAGCGATGTGATCCATGGTTCATCGGAAAAGACGCTGCTGTTGACGGGTACGG TATTTTTGATTGCCGGAGTAGCTTTTAAACTTGGTGCCGTGCCGTTTCATATGTGGTTGCCCGATGTGTATCAAGGGGCG CCGACACCCATTGTTTTGTTTATCAGTTCGGCGCCAAAGTTGGCAGCATTCGGTATGGCTTATCGACTATTGGAAGTGGG TGTCGGTCCATTGTCCCCGCAGTGGCATTTGATTTTTGGTGGTCTGGCGGCGCTCTCCTTGGTGATTGGCAATCTGATGG CGATTGTGCAGACCAACTTGAAGCGTATGCTGGCTTACTCGACTGTCTCTCATGTCGGTTTTTTGATGATGGGTATGTCT GGTGGCGGTATACGCGGTTATTCCTCGTCCATGTTCTATGTGTTGAGTTACGCAATCATGTCTACCGCTTCGTTTGGAGC GATTATTGCGATGTCAAGTCGCGGTTCCGAGGCTGAGAATATTGACGACTTTAAAGGATTGAGCACGCGTCATCCTTGGA TGGCGTGCTTGCTCTTATGTGTCATGGCTTCGTTAGCTGGTATTCCTCCTTTCTTAGGATTTTGGACAAAATTGGCTGTG CTCGGTGCTGCAGTTCAGGGGGGCATGCTGTGGTTGGCGATTCTTGGGGTGATCTGTGCGGTGATTGGTGCTTACTATTA TCTTCGTGTCATTAAAGTGATGTATTTTGATGAGCCCGTTGGTGAGCCGCTCCCAGTGAATGATGGTCGTGTTCTGAGAG TCATTCTGAGTATTAATGTGTTTGCTCTGTTGGCTTTAGGAATCCTTTGGAACCCGATCATTGATTGGTGCCAGAAGGCA TTTGCTCATCTGGTCTGA
Upstream 100 bases:
>100_bases CTTATTGATTTGATGGATTCTTCCATTGTCAAGCTCACTACTCAGATTGCCGTGAGCAAGCTGTGATCGGCTGCGGCACA ATTGATTTCAGGATTCGATA
Downstream 100 bases:
>100_bases AGATTCCCAGTCATCACAGTATAGAAAGTCACGCAGCTTTTGCTTGTTTTTAATTTTAATTGGCTTGTTGGAATGGGACG TCGGTGCGTTGTTCTCTCGG
Product: NADH dehydrogenase subunit N
Products: NA
Alternate protein names: NADH dehydrogenase I subunit N; NDH-1 subunit N [H]
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MTMPTSGLNIADLAPLLPELVLLASTFALLMIDLFIGQVRKVWTHFLSVAILVVVLSMLVAGVGGQGAAFHGMFVRDSAA DMMKVVIVLVSALSLVYGWSYLRERNLFQGEIPVLVLFATLGMMVLVSAGHLLMVYLGLELLALCSYALVAVNRDSKIST EAAMKYIVLGSLASGLLLYGMSLIYGATGTLSLPGISDVIHGSSEKTLLLTGTVFLIAGVAFKLGAVPFHMWLPDVYQGA PTPIVLFISSAPKLAAFGMAYRLLEVGVGPLSPQWHLIFGGLAALSLVIGNLMAIVQTNLKRMLAYSTVSHVGFLMMGMS GGGIRGYSSSMFYVLSYAIMSTASFGAIIAMSSRGSEAENIDDFKGLSTRHPWMACLLLCVMASLAGIPPFLGFWTKLAV LGAAVQGGMLWLAILGVICAVIGAYYYLRVIKVMYFDEPVGEPLPVNDGRVLRVILSINVFALLALGILWNPIIDWCQKA FAHLV
Sequences:
>Translated_485_residues MTMPTSGLNIADLAPLLPELVLLASTFALLMIDLFIGQVRKVWTHFLSVAILVVVLSMLVAGVGGQGAAFHGMFVRDSAA DMMKVVIVLVSALSLVYGWSYLRERNLFQGEIPVLVLFATLGMMVLVSAGHLLMVYLGLELLALCSYALVAVNRDSKIST EAAMKYIVLGSLASGLLLYGMSLIYGATGTLSLPGISDVIHGSSEKTLLLTGTVFLIAGVAFKLGAVPFHMWLPDVYQGA PTPIVLFISSAPKLAAFGMAYRLLEVGVGPLSPQWHLIFGGLAALSLVIGNLMAIVQTNLKRMLAYSTVSHVGFLMMGMS GGGIRGYSSSMFYVLSYAIMSTASFGAIIAMSSRGSEAENIDDFKGLSTRHPWMACLLLCVMASLAGIPPFLGFWTKLAV LGAAVQGGMLWLAILGVICAVIGAYYYLRVIKVMYFDEPVGEPLPVNDGRVLRVILSINVFALLALGILWNPIIDWCQKA FAHLV >Mature_484_residues TMPTSGLNIADLAPLLPELVLLASTFALLMIDLFIGQVRKVWTHFLSVAILVVVLSMLVAGVGGQGAAFHGMFVRDSAAD MMKVVIVLVSALSLVYGWSYLRERNLFQGEIPVLVLFATLGMMVLVSAGHLLMVYLGLELLALCSYALVAVNRDSKISTE AAMKYIVLGSLASGLLLYGMSLIYGATGTLSLPGISDVIHGSSEKTLLLTGTVFLIAGVAFKLGAVPFHMWLPDVYQGAP TPIVLFISSAPKLAAFGMAYRLLEVGVGPLSPQWHLIFGGLAALSLVIGNLMAIVQTNLKRMLAYSTVSHVGFLMMGMSG GGIRGYSSSMFYVLSYAIMSTASFGAIIAMSSRGSEAENIDDFKGLSTRHPWMACLLLCVMASLAGIPPFLGFWTKLAVL GAAVQGGMLWLAILGVICAVIGAYYYLRVIKVMYFDEPVGEPLPVNDGRVLRVILSINVFALLALGILWNPIIDWCQKAF AHLV
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1007
COG function: function code C; NADH:ubiquinone oxidoreductase subunit 2 (chain N)
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 2 family [H]
Homologues:
Organism=Homo sapiens, GI251831108, Length=321, Percent_Identity=24.6105919003115, Blast_Score=76, Evalue=7e-14, Organism=Escherichia coli, GI145693160, Length=450, Percent_Identity=35.7777777777778, Blast_Score=225, Evalue=4e-60, Organism=Escherichia coli, GI1788614, Length=368, Percent_Identity=26.9021739130435, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1788831, Length=381, Percent_Identity=25.7217847769029, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1788829, Length=345, Percent_Identity=27.2463768115942, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1788827, Length=279, Percent_Identity=29.3906810035842, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1788613, Length=331, Percent_Identity=25.9818731117825, Blast_Score=74, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010096 - InterPro: IPR001750 [H]
Pfam domain/function: PF00361 Oxidored_q1 [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 51873; Mature: 51742
Theoretical pI: Translated: 8.20; Mature: 8.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMPTSGLNIADLAPLLPELVLLASTFALLMIDLFIGQVRKVWTHFLSVAILVVVLSMLV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVGGQGAAFHGMFVRDSAADMMKVVIVLVSALSLVYGWSYLRERNLFQGEIPVLVLFAT HCCCCCCCEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LGMMVLVSAGHLLMVYLGLELLALCSYALVAVNRDSKISTEAAMKYIVLGSLASGLLLYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MSLIYGATGTLSLPGISDVIHGSSEKTLLLTGTVFLIAGVAFKLGAVPFHMWLPDVYQGA HHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHCCHHHCCC PTPIVLFISSAPKLAAFGMAYRLLEVGVGPLSPQWHLIFGGLAALSLVIGNLMAIVQTNL CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KRMLAYSTVSHVGFLMMGMSGGGIRGYSSSMFYVLSYAIMSTASFGAIIAMSSRGSEAEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC IDDFKGLSTRHPWMACLLLCVMASLAGIPPFLGFWTKLAVLGAAVQGGMLWLAILGVICA CHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIGAYYYLRVIKVMYFDEPVGEPLPVNDGRVLRVILSINVFALLALGILWNPIIDWCQKA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHLV HHHCC >Mature Secondary Structure TMPTSGLNIADLAPLLPELVLLASTFALLMIDLFIGQVRKVWTHFLSVAILVVVLSMLV CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGVGGQGAAFHGMFVRDSAADMMKVVIVLVSALSLVYGWSYLRERNLFQGEIPVLVLFAT HCCCCCCCEEECEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH LGMMVLVSAGHLLMVYLGLELLALCSYALVAVNRDSKISTEAAMKYIVLGSLASGLLLYG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH MSLIYGATGTLSLPGISDVIHGSSEKTLLLTGTVFLIAGVAFKLGAVPFHMWLPDVYQGA HHHHHCCCCCCCCCCHHHHHCCCCCCEEEEEHHHHHHHHHHHHHCCCHHHHHCCHHHCCC PTPIVLFISSAPKLAAFGMAYRLLEVGVGPLSPQWHLIFGGLAALSLVIGNLMAIVQTNL CCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH KRMLAYSTVSHVGFLMMGMSGGGIRGYSSSMFYVLSYAIMSTASFGAIIAMSSRGSEAEN HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCC IDDFKGLSTRHPWMACLLLCVMASLAGIPPFLGFWTKLAVLGAAVQGGMLWLAILGVICA CHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIGAYYYLRVIKVMYFDEPVGEPLPVNDGRVLRVILSINVFALLALGILWNPIIDWCQKA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAHLV HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA