Definition | Shewanella halifaxensis HAW-EB4 chromosome, complete genome. |
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Accession | NC_010334 |
Length | 5,226,917 |
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The map label for this gene is htpG
Identifier: 167623527
GI number: 167623527
Start: 1913688
End: 1915607
Strand: Direct
Name: htpG
Synonym: Shal_1596
Alternate gene names: 167623527
Gene position: 1913688-1915607 (Clockwise)
Preceding gene: 167623526
Following gene: 167623528
Centisome position: 36.61
GC content: 46.04
Gene sequence:
>1920_bases ATGTCACAACAAGAGACGCACGGCTTTCAAACTGAAGTCAAACAGCTACTACATTTAATGATCCACTCTTTGTACTCAAA CAAAGAGATCTTTTTGCGTGAGTTAGTATCTAACGCAGCCGATGCAGCCGATAAGCTACGCTATGAAGCCCTAACGAATG ATGCTCTTTATGAGGGTGACGGTGAGTTACGTGTTCGCATTAGTGCCGATAAAGAGAAAGGTACCGTAACAATTGAAGAC AACGGTATCGGTATGACTCGCGATGGTGTGATTGAGCACCTAGGTACAATCGCAAAGTCTGGTACTGCTGAATTTTTTAA GAACATGTCTGGTGACGAGTCAAAAGACTCACAGTTAATTGGTCAGTTCGGTGTCGGTTTCTACTCTTCATTTATTGTTG CAGACCGAGTGACAGTGCGTACCCGCGCTGCCGGCCATAGCGCTGATGAAGCGGTACTGTGGGAGTCTGCCGGTGAAGGT GACTTCACGGTTGAAACCATCACTAAGCAGAGCCGTGGTACTGAAATTACTCTACATCTTCGCGATGACGAAAAAGAGTT TGCAGACGACTATCGTCTACGCTCAATTATTACTAAGTACTCAGATCATATCTCTGTTCCAGTAGAGATGTATGAAGAAG GCACGCCTGCGGTTGAAGCGACAGAAGAGGGCGGTGAAGCGATTCCTGCTACTGAAGGTCACTGGAAGCTAATGAACAAG GCGACAGCACTTTGGACTCGCAACAAGAGTGATGTGTCTGACGAAGAGTATCAAGAATTTTATAAGTATATCTCTCATGA CTTTACCGACCCACTATTGTGGAGCCACAACCGCGTGGAAGGTAAGCAAGAGTACACCAGCTTACTGTATATCCCAGCGA AAGCGCCTTGGGATATGTGGAACCGCGACCGTAAGCACGGTCTAAAGTTATTCGTTCAGCGTGTATTCGTTATGGATGAT GCAGAGCAGTTTATGCCGAGTTACCTGCGTTTTGTACAAGGTTTGATTGACTCGAACGATCTGCCACTAAACGTATCACG TGAAATCTTGCAAGATAACAAGGTAACCACAGCGCTTCGTACCGCAGTGACTAAGCGTGTACTTGGCATGCTAGAAAAGC TTGCTAAGAATGACGCTGAAAAGTATCAGTCTTTCTGGACCGAGTTTGGCCAAGTACTAAAAGAAGGTCCCGCTGAGGAT TTTGCTAATAAAGAGCGTGTAGCGGGTCTGCTGCGTTTCGCATCGACTCACACAGGCGAAGCAACAGCCAATGTATCGTT GGCTGATTATGTTGAACGCATGAAAGAAGGTCAGTCTAAGATCTATTTCATTGTCGCTGATAGCTATGAAGCTGCCGCAA ATAGCCCGCATCTTGAATTGCTACGTAAGAAGGGCATTGAAGTCTTATTAATGTCAGAGCGTATCGATGAGTGGTTGATT AATCACTTAACTGAATTTGACGGTAAAAAGTTACACTCAGTGACACGTGGCGACCTTGAGCTAGGTGAGCTAGAAGATGC TAGCGAAAAAGAGGCGCAAGAGAAGCTAGAAACTGAATCTGAAGGCCTAGTTAAGCGCGTTAAAGACAGCCTAGGCGATA AAGTGTCAGCGGTTAAAGTGACGACACGTCTAACCGATACCCCTGCATGTGTGGTTGCTGGTGAGGGCGAGATGTCAACC CAGATGATTAAGTTGATGCAAGCTGCTGGACAAGACGTGCCTGAATCTAAGCCTACATTTGAGCTAAACCCTGAGCATCC GCTAGTTGCGCGTTTAAATGACGAGCAGGACGAGCAGCGATTTGCTCAGTGGTCAGAGCTACTATTGCAGCAGGCATTGT TGTCAGAAAAAGGCAGCCTTGCAGATCCATCGGCATTTATTAAGCTAATGAACCAAATGCTATTAGCTAGCGTTAAGTAA
Upstream 100 bases:
>100_bases GCAATTGAAGACAATGCCAGATTTATCCCTTGAAAAGTCATTTTATAGCCCCATCTTATTTGTAAGCTTTATTTAAACTG ATTTTTAAAGGGAACATTTC
Downstream 100 bases:
>100_bases TTAGCAGCTATGATTAAAGGGGCAGTTACACTGCCTCTTTTTTATGGTCCAGATAAGTTCAGGCGAAAGCGAAAGGAAAG TTATGGAATCGATTCTAGAA
Product: heat shock protein 90
Products: NA
Alternate protein names: Heat shock protein htpG; High temperature protein G
Number of amino acids: Translated: 639; Mature: 638
Protein sequence:
>639_residues MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTNDALYEGDGELRVRISADKEKGTVTIED NGIGMTRDGVIEHLGTIAKSGTAEFFKNMSGDESKDSQLIGQFGVGFYSSFIVADRVTVRTRAAGHSADEAVLWESAGEG DFTVETITKQSRGTEITLHLRDDEKEFADDYRLRSIITKYSDHISVPVEMYEEGTPAVEATEEGGEAIPATEGHWKLMNK ATALWTRNKSDVSDEEYQEFYKYISHDFTDPLLWSHNRVEGKQEYTSLLYIPAKAPWDMWNRDRKHGLKLFVQRVFVMDD AEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKNDAEKYQSFWTEFGQVLKEGPAED FANKERVAGLLRFASTHTGEATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLI NHLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKVTTRLTDTPACVVAGEGEMST QMIKLMQAAGQDVPESKPTFELNPEHPLVARLNDEQDEQRFAQWSELLLQQALLSEKGSLADPSAFIKLMNQMLLASVK
Sequences:
>Translated_639_residues MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTNDALYEGDGELRVRISADKEKGTVTIED NGIGMTRDGVIEHLGTIAKSGTAEFFKNMSGDESKDSQLIGQFGVGFYSSFIVADRVTVRTRAAGHSADEAVLWESAGEG DFTVETITKQSRGTEITLHLRDDEKEFADDYRLRSIITKYSDHISVPVEMYEEGTPAVEATEEGGEAIPATEGHWKLMNK ATALWTRNKSDVSDEEYQEFYKYISHDFTDPLLWSHNRVEGKQEYTSLLYIPAKAPWDMWNRDRKHGLKLFVQRVFVMDD AEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKNDAEKYQSFWTEFGQVLKEGPAED FANKERVAGLLRFASTHTGEATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLI NHLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKVTTRLTDTPACVVAGEGEMST QMIKLMQAAGQDVPESKPTFELNPEHPLVARLNDEQDEQRFAQWSELLLQQALLSEKGSLADPSAFIKLMNQMLLASVK >Mature_638_residues SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTNDALYEGDGELRVRISADKEKGTVTIEDN GIGMTRDGVIEHLGTIAKSGTAEFFKNMSGDESKDSQLIGQFGVGFYSSFIVADRVTVRTRAAGHSADEAVLWESAGEGD FTVETITKQSRGTEITLHLRDDEKEFADDYRLRSIITKYSDHISVPVEMYEEGTPAVEATEEGGEAIPATEGHWKLMNKA TALWTRNKSDVSDEEYQEFYKYISHDFTDPLLWSHNRVEGKQEYTSLLYIPAKAPWDMWNRDRKHGLKLFVQRVFVMDDA EQFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALRTAVTKRVLGMLEKLAKNDAEKYQSFWTEFGQVLKEGPAEDF ANKERVAGLLRFASTHTGEATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLIN HLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKVTTRLTDTPACVVAGEGEMSTQ MIKLMQAAGQDVPESKPTFELNPEHPLVARLNDEQDEQRFAQWSELLLQQALLSEKGSLADPSAFIKLMNQMLLASVK
Specific function: Molecular chaperone. Has ATPase activity
COG id: COG0326
COG function: function code O; Molecular chaperone, HSP90 family
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the heat shock protein 90 family
Homologues:
Organism=Homo sapiens, GI4507677, Length=686, Percent_Identity=38.0466472303207, Blast_Score=437, Evalue=1e-122, Organism=Homo sapiens, GI20149594, Length=678, Percent_Identity=36.5781710914454, Blast_Score=388, Evalue=1e-108, Organism=Homo sapiens, GI155722983, Length=648, Percent_Identity=34.8765432098765, Blast_Score=376, Evalue=1e-104, Organism=Homo sapiens, GI154146191, Length=408, Percent_Identity=38.4803921568627, Blast_Score=278, Evalue=1e-74, Organism=Homo sapiens, GI153792590, Length=408, Percent_Identity=38.4803921568627, Blast_Score=275, Evalue=9e-74, Organism=Escherichia coli, GI1786679, Length=636, Percent_Identity=67.9245283018868, Blast_Score=892, Evalue=0.0, Organism=Caenorhabditis elegans, GI17559162, Length=668, Percent_Identity=37.4251497005988, Blast_Score=446, Evalue=1e-125, Organism=Caenorhabditis elegans, GI17542208, Length=679, Percent_Identity=37.5552282768778, Blast_Score=409, Evalue=1e-114, Organism=Caenorhabditis elegans, GI115535205, Length=655, Percent_Identity=32.9770992366412, Blast_Score=323, Evalue=2e-88, Organism=Caenorhabditis elegans, GI115535167, Length=444, Percent_Identity=35.8108108108108, Blast_Score=267, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6323840, Length=684, Percent_Identity=37.8654970760234, Blast_Score=454, Evalue=1e-128, Organism=Saccharomyces cerevisiae, GI6325016, Length=680, Percent_Identity=37.7941176470588, Blast_Score=442, Evalue=1e-125, Organism=Drosophila melanogaster, GI17647529, Length=684, Percent_Identity=37.5730994152047, Blast_Score=467, Evalue=1e-132, Organism=Drosophila melanogaster, GI21357739, Length=678, Percent_Identity=38.7905604719764, Blast_Score=424, Evalue=1e-118, Organism=Drosophila melanogaster, GI24586016, Length=648, Percent_Identity=34.4135802469136, Blast_Score=369, Evalue=1e-102,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 2419 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): HTPG_SHEHH (B0TP05)
Other databases:
- EMBL: CP000931 - RefSeq: YP_001673821.1 - ProteinModelPortal: B0TP05 - SMR: B0TP05 - GeneID: 5906428 - GenomeReviews: CP000931_GR - KEGG: shl:Shal_1596 - HOGENOM: HBG631012 - OMA: KYIANAY - ProtClustDB: PRK05218 - BioCyc: SHAL458817:SHAL_1596-MONOMER - GO: GO:0005737 - HAMAP: MF_00505 - InterPro: IPR003594 - InterPro: IPR019805 - InterPro: IPR001404 - InterPro: IPR020575 - InterPro: IPR020568 - Gene3D: G3DSA:3.30.565.10 - PANTHER: PTHR11528 - PIRSF: PIRSF002583 - PRINTS: PR00775 - SMART: SM00387
Pfam domain/function: PF02518 HATPase_c; PF00183 HSP90; SSF55874 ATP_bd_ATPase; SSF54211 Ribosomal_S5_D2-typ_fold
EC number: NA
Molecular weight: Translated: 71936; Mature: 71804
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: PS00298 HSP90
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTNDALYEGD CCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC GELRVRISADKEKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNMSGDESKDSQLI CCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHH GQFGVGFYSSFIVADRVTVRTRAAGHSADEAVLWESAGEGDFTVETITKQSRGTEITLHL HHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCEEHHHHHHCCCCCEEEEEE RDDEKEFADDYRLRSIITKYSDHISVPVEMYEEGTPAVEATEEGGEAIPATEGHWKLMNK CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHH ATALWTRNKSDVSDEEYQEFYKYISHDFTDPLLWSHNRVEGKQEYTSLLYIPAKAPWDMW HHHHEECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHCEEEEEECCCCHHHH NRDRKHGLKLFVQRVFVMDDAEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHH TAVTKRVLGMLEKLAKNDAEKYQSFWTEFGQVLKEGPAEDFANKERVAGLLRFASTHTGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCC ATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLI CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHH NHLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKV HHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TTRLTDTPACVVAGEGEMSTQMIKLMQAAGQDVPESKPTFELNPEHPLVARLNDEQDEQR EEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCHHHHH FAQWSELLLQQALLSEKGSLADPSAFIKLMNQMLLASVK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SQQETHGFQTEVKQLLHLMIHSLYSNKEIFLRELVSNAADAADKLRYEALTNDALYEGD CCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECC GELRVRISADKEKGTVTIEDNGIGMTRDGVIEHLGTIAKSGTAEFFKNMSGDESKDSQLI CCEEEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHH GQFGVGFYSSFIVADRVTVRTRAAGHSADEAVLWESAGEGDFTVETITKQSRGTEITLHL HHHHHHHHHHHHHHHHHEEEEECCCCCCCCEEEECCCCCCCEEHHHHHHCCCCCEEEEEE RDDEKEFADDYRLRSIITKYSDHISVPVEMYEEGTPAVEATEEGGEAIPATEGHWKLMNK CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHH ATALWTRNKSDVSDEEYQEFYKYISHDFTDPLLWSHNRVEGKQEYTSLLYIPAKAPWDMW HHHHEECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHCEEEEEECCCCHHHH NRDRKHGLKLFVQRVFVMDDAEQFMPSYLRFVQGLIDSNDLPLNVSREILQDNKVTTALR CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCHHHHHHH TAVTKRVLGMLEKLAKNDAEKYQSFWTEFGQVLKEGPAEDFANKERVAGLLRFASTHTGE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHCCCCC ATANVSLADYVERMKEGQSKIYFIVADSYEAAANSPHLELLRKKGIEVLLMSERIDEWLI CCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEHHHHHHHHHH NHLTEFDGKKLHSVTRGDLELGELEDASEKEAQEKLETESEGLVKRVKDSLGDKVSAVKV HHHHHCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEE TTRLTDTPACVVAGEGEMSTQMIKLMQAAGQDVPESKPTFELNPEHPLVARLNDEQDEQR EEEECCCCEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCEEECCCCCEEEECCCCHHHHH FAQWSELLLQQALLSEKGSLADPSAFIKLMNQMLLASVK HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA