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The map label for this gene is recR

Identifier: 167623526

GI number: 167623526

Start: 1912899

End: 1913498

Strand: Direct

Name: recR

Synonym: Shal_1595

Alternate gene names: 167623526

Gene position: 1912899-1913498 (Clockwise)

Preceding gene: 167623525

Following gene: 167623527

Centisome position: 36.6

GC content: 49.0

Gene sequence:

>600_bases
ATGAAATTTAGTCCACTCGTTGATGAGTTGATCCAGTCACTTCGTTGTTTACCTGGTGTTGGCCCTAAGTCTGCACAAAG
AATGGCATTTCAGCTTCTAGAGCGTGATCGTAAGGCGGGAGCTAAGCTTGCTGACTCATTGGCTAAAGCCATGTCAGATG
TTGGCCATTGTCAGTCATGCCGTACTTTTACCGAAGAAACTTACTGCCCCATTTGCGTGAGTACGAAGCGTGGTCATTCG
GATATTATTTGTGTGGTAGAAACGCCGGCCGATGTATTGGCGATTGAAGCAGGTGGCCACTTTTCTGGGCGTTACTTTGT
CTTATTAGGACATCTGTCACCGCTTGATGGCGTCGGACCTGAAGAGCTTGGGCTTGCGCTACTTGAACAGCACCTAGCAT
CTGGTGATGTGAGCGAGCTTATTTTAGCTACTAATCCAACGGTTGAAGGCGATGCCACTGCGCACTATATCGCCGATATG
GCAAAGCGTCATGAATTGATGGTGAGTCGGATTGCACATGGGGTGCCTGTTGGCGGCGAGCTTGAATATGTCGATAGCAC
CACCTTAGCCTTGTCCTTTAATGGGCGCCTACCTATCTAG

Upstream 100 bases:

>100_bases
TAATTTGATGATGAGCTGTGTCTGTGAGTTATTTCCCCAGTCGTAAACCTCATCGACCATTATCTTAGGCATAGAGATGC
CTTTCTAAGCGGAATGTTAA

Downstream 100 bases:

>100_bases
TTTGTTTCTTGCAAAACAATTCGCCGCATAATCTATGTTCATAAATTAAAATCCAGTCAGTGACTTGTTGCCGACTGGTT
TTTTTTTGCGCAATTGAAGA

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSCRTFTEETYCPICVSTKRGHS
DIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEELGLALLEQHLASGDVSELILATNPTVEGDATAHYIADM
AKRHELMVSRIAHGVPVGGELEYVDSTTLALSFNGRLPI

Sequences:

>Translated_199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSCRTFTEETYCPICVSTKRGHS
DIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEELGLALLEQHLASGDVSELILATNPTVEGDATAHYIADM
AKRHELMVSRIAHGVPVGGELEYVDSTTLALSFNGRLPI
>Mature_199_residues
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSCRTFTEETYCPICVSTKRGHS
DIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGPEELGLALLEQHLASGDVSELILATNPTVEGDATAHYIADM
AKRHELMVSRIAHGVPVGGELEYVDSTTLALSFNGRLPI

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=199, Percent_Identity=62.3115577889447, Blast_Score=266, Evalue=6e-73,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_SHEHH (B0TP04)

Other databases:

- EMBL:   CP000931
- RefSeq:   YP_001673820.1
- ProteinModelPortal:   B0TP04
- SMR:   B0TP04
- GeneID:   5906252
- GenomeReviews:   CP000931_GR
- KEGG:   shl:Shal_1595
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   SHAL458817:SHAL_1595-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 21328; Mature: 21328

Theoretical pI: Translated: 5.52; Mature: 5.52

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTFTEETYCPICVSTKRGHSDIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGP
HHHHCCCCCCEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH
EELGLALLEQHLASGDVSELILATNPTVEGDATAHYIADMAKRHELMVSRIAHGVPVGGE
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPI
EEEECCEEEEEEECCCCCC
>Mature Secondary Structure
MKFSPLVDELIQSLRCLPGVGPKSAQRMAFQLLERDRKAGAKLADSLAKAMSDVGHCQSC
CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTFTEETYCPICVSTKRGHSDIICVVETPADVLAIEAGGHFSGRYFVLLGHLSPLDGVGP
HHHHCCCCCCEEECCCCCCCCEEEEEECCCCEEEEECCCCCCCEEEEEEECCCCCCCCCH
EELGLALLEQHLASGDVSELILATNPTVEGDATAHYIADMAKRHELMVSRIAHGVPVGGE
HHHHHHHHHHHHCCCCHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LEYVDSTTLALSFNGRLPI
EEEECCEEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA