Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622039

Identifier: 167622039

GI number: 167622039

Start: 110298

End: 111203

Strand: Reverse

Name: 167622039

Synonym: Shal_0098

Alternate gene names: NA

Gene position: 111203-110298 (Counterclockwise)

Preceding gene: 167622040

Following gene: 167622036

Centisome position: 2.13

GC content: 48.12

Gene sequence:

>906_bases
ATGACTGAGCCGACTGACCTGATCTATATGAGTGCCAAACAGGTATCTGAGTACCTAGATCTCAATGAGAAGAAAGTCTA
CTCAATGGCCAACGATCGGATTCTACCCGCGACTAAAATCACTGGTAAGTGGCTGTTTCCAAAAATTTTGATCGACAGAT
GGGTAATGGACTCCTGTCACAGCGGTATGCTGTCTGACCGTATGCACATCACAGGTAGTGATGACCCTCTGCTATCGATG
CTTGTGGCAAGAATGATGTCGCAGGTAGGTAAAAGTGAACTGATCAGCTACAGTTCTACAGGTTCACGCTTAGGTCTAGA
CTTACTATCCCGAGGTTACGCCGATGTGTGCACTCTGCACTGGGGCAGTGTCGAGGAGCGTAGTGTACGTCACCCTGCAT
TACTACAGGGTTATGCCAACCATCAGCAGTGGGTTATGGTGCACGGCTATACCCGCAAGCAAGGTTTGATGATGCGTCCA
GATATGCATCACCGCTGCCAGGAGCTGGACAAAGTGTCTCAACAGTCTTGGCGTTGGGTTGCTCGTCAGGCTGGTGCGGG
TAGCCAACAACACCTTGAGCAGTGGTTAATGAAGCAAGGTGCTTCATTTGAAGAGCTGAACTCGAGTATTGTAGCTCAAA
GTGAACGTGAGCTAGCGGGCTATATTGCTCGCAACAATGCCGATATAGGCTTTGGTTGTCAGTCGGTAGCACTTGAGAGC
GGCTTAAGCTTTGTACCGTTAGTCACTGAATCATTTGATTTTGTCATGCCTCAAGGGATCTATTTTAGACGCCAGCTACA
AAGACTGTTCAACTTATTAGCTGAGCCACAAACGCAACAACTTGCAGCGACCCTAGGCGGTTATGATTTAACAGATTGTG
GGAAGTTGCTCTGGAATGGTCAGTAA

Upstream 100 bases:

>100_bases
ACTTCTTAATTTATAACGGTGCAGAGAACGTTGAATTTGATGCACTTTCTTAAGCCAATACCCCTAATATTATCGATAAA
ATGCGTGACAAGGAATAATA

Downstream 100 bases:

>100_bases
CCCTATCAAGCTGTAATAAGCTAAAACAGCTTATATTGGCTAACTTGGTGAAATATCATTTTCCATAAATCTCGATGCCG
TCACCAGATAGAACTGCGTA

Product: DNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 300

Protein sequence:

>301_residues
MTEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCHSGMLSDRMHITGSDDPLLSM
LVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLHWGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRP
DMHHRCQELDKVSQQSWRWVARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES
GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNGQ

Sequences:

>Translated_301_residues
MTEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCHSGMLSDRMHITGSDDPLLSM
LVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLHWGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRP
DMHHRCQELDKVSQQSWRWVARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES
GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNGQ
>Mature_300_residues
TEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCHSGMLSDRMHITGSDDPLLSML
VARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLHWGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRPD
MHHRCQELDKVSQQSWRWVARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALESG
LSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNGQ

Specific function: Unknown

COG id: COG1910

COG function: function code P; Periplasmic molybdate-binding protein/domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the moeA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020817
- InterPro:   IPR008284
- InterPro:   IPR005111
- InterPro:   IPR005110
- InterPro:   IPR001453 [H]

Pfam domain/function: PF00994 MoCF_biosynth; PF03454 MoeA_C; PF03453 MoeA_N [H]

EC number: NA

Molecular weight: Translated: 34086; Mature: 33955

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
6.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCH
CCCCCHHEEHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SGMLSDRMHITGSDDPLLSMLVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLH
CCHHHCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHCCCHHHHEEE
WGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRPDMHHRCQELDKVSQQSWRWV
CCCCCHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
ARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES
HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC
GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNG
CCCEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCC
Q
C
>Mature Secondary Structure 
TEPTDLIYMSAKQVSEYLDLNEKKVYSMANDRILPATKITGKWLFPKILIDRWVMDSCH
CCCCHHEEHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH
SGMLSDRMHITGSDDPLLSMLVARMMSQVGKSELISYSSTGSRLGLDLLSRGYADVCTLH
CCHHHCCEEECCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCCHHHHHHHHCCCHHHHEEE
WGSVEERSVRHPALLQGYANHQQWVMVHGYTRKQGLMMRPDMHHRCQELDKVSQQSWRWV
CCCCCHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHHH
ARQAGAGSQQHLEQWLMKQGASFEELNSSIVAQSERELAGYIARNNADIGFGCQSVALES
HHHCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHC
GLSFVPLVTESFDFVMPQGIYFRRQLQRLFNLLAEPQTQQLAATLGGYDLTDCGKLLWNG
CCCEEEHHHCCHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHCCC
Q
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]