Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622023

Identifier: 167622023

GI number: 167622023

Start: 92692

End: 93087

Strand: Reverse

Name: 167622023

Synonym: Shal_0082

Alternate gene names: NA

Gene position: 93087-92692 (Counterclockwise)

Preceding gene: 167622024

Following gene: 167622022

Centisome position: 1.78

GC content: 41.41

Gene sequence:

>396_bases
ATGACAACCCTAACCAGTCAAAGCAACAAAATTACCCTGATCAAATCAGGCTCTTTCGCACTTAATGATTTAAGTCAGTT
ATTAAACATCGAAAACCTAAAGAGTGATATGGCTGAAGTTAGTGTCACTAACAACAGCAATGCCCTCACTATTGGCCACT
TTACGATGGCACCGGGCACTGAATTTGAGTACTTCTATGATTCTGTAGAATATAAGGTGATCACCAAAGGAAAGATCGTC
GTACGTGACACTGATAACATTAAGTATGTAGCTGAAGTCGGTGACGTATTACTCTTCTCTCCAGATGTCACAGTCATTTT
TGACGCTGAAAGTGATGGAGAAGCCATCTACACGGCTCACCGTCTAGCTTCTGCTGACTTTGCACCAAAAGCTTAA

Upstream 100 bases:

>100_bases
GCGCGTTTGTAATCCGATCTTAAAGCAATCAATACGTTAGCTCACAAGTAACAATGAAGGGAAATCTGCATTTCCCCTCA
TTCATTATTCTAGGATCCCT

Downstream 100 bases:

>100_bases
TTAAGCACTCGCTTTACTGACACCAACCTAACCCTAACTTAGGGTTGGTGTTTTACGTTCACTAAACCCAGCGACCCCTT
TCAGCTCCGATGATAACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTTLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGTEFEYFYDSVEYKVITKGKIV
VRDTDNIKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAHRLASADFAPKA

Sequences:

>Translated_131_residues
MTTLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGTEFEYFYDSVEYKVITKGKIV
VRDTDNIKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAHRLASADFAPKA
>Mature_130_residues
TTLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGTEFEYFYDSVEYKVITKGKIVV
RDTDNIKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAHRLASADFAPKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14321; Mature: 14190

Theoretical pI: Translated: 4.31; Mature: 4.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGT
CCCCCCCCCEEEEEECCCCCHHHHHHHHCHHHHCCCCEEEEEECCCCEEEEEEEEECCCC
EFEYFYDSVEYKVITKGKIVVRDTDNIKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAH
CCEEEECCEEEEEEECCEEEEEECCCEEEEEECCCEEEECCCEEEEEECCCCCCEEEEEE
RLASADFAPKA
HHCCCCCCCCC
>Mature Secondary Structure 
TTLTSQSNKITLIKSGSFALNDLSQLLNIENLKSDMAEVSVTNNSNALTIGHFTMAPGT
CCCCCCCCEEEEEECCCCCHHHHHHHHCHHHHCCCCEEEEEECCCCEEEEEEEEECCCC
EFEYFYDSVEYKVITKGKIVVRDTDNIKYVAEVGDVLLFSPDVTVIFDAESDGEAIYTAH
CCEEEECCEEEEEEECCEEEEEECCCEEEEEECCCEEEECCCEEEEEECCCCCCEEEEEE
RLASADFAPKA
HHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA