Definition Shewanella halifaxensis HAW-EB4 chromosome, complete genome.
Accession NC_010334
Length 5,226,917

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The map label for this gene is 167622022

Identifier: 167622022

GI number: 167622022

Start: 91842

End: 92510

Strand: Reverse

Name: 167622022

Synonym: Shal_0081

Alternate gene names: NA

Gene position: 92510-91842 (Counterclockwise)

Preceding gene: 167622023

Following gene: 167622021

Centisome position: 1.77

GC content: 47.23

Gene sequence:

>669_bases
ATGTATAAAGCTCTGCGTACCTACATCTCGATTGCATTATTACTATTTTCTATCCCAGCAATAGCTGGAGAAGTGGCGCG
CGTCACCTTAGAAAACGGTGCCACGGTCAAACTCAACGACGACTTTAATTGGGAATATGTCATTCTTGAGAGCCAAACCA
AACCCGATACCGCGGTGCCAGTCACCTTACCAGCAACTGTCAGTACAGTCGCTGTAGCTGCAAGCACTGCTCCGGTAGAA
ACTGAAGCGCTAGCAAAAGTCGAAGCCGTTCCTACGACGCTACCGGCTAATATCGAAACTCTGACCTCAACAGCGATAGC
CCAAGCAGAACTTTTAAAGTCGACGGCCAAAAGTGGTGTAAAGGTTAGCTTGCTTAACAGTCAGTGGGATGATGATGGTC
GTCTTGGGCTAACTTTTGAGCTTAGCAGCACCAGTCCAGAACACTACGTGATGATCGAGCTAGAGGTCAGTCTGTTTGCC
GACTCCGGTGCACTAATTGACAAAGAAACCATCAAGGTATGGCAAGCAATTTTCAGAATGCCGGACTCTTACCTACGTAA
AGGCCAGACTCGTGAAAGTCGTACCTTCTGGATTGAAGGCATCGACAAAGCCCAGTGGACTAAAGAGTTGATGAGCCTAA
AAATCGGTGAGATGGATTCAAGAATGTAA

Upstream 100 bases:

>100_bases
CAGCTCCGATGATAACTACGTCTTATTCTGACTAACACCTGTATTAATCCCGCACGACTTTGTCTATGCTAAGGCAATCA
ACTTAAACAGGTTATTTCCC

Downstream 100 bases:

>100_bases
TCTCACAAAACAGGTTTAAAGACAGCCGCAAGGGTAACCTCCTTGTGGCTTTTTTCGTTTAAGCGCCTTGTAAAAAGTGG
GGAACTATCGATCTGGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MYKALRTYISIALLLFSIPAIAGEVARVTLENGATVKLNDDFNWEYVILESQTKPDTAVPVTLPATVSTVAVAASTAPVE
TEALAKVEAVPTTLPANIETLTSTAIAQAELLKSTAKSGVKVSLLNSQWDDDGRLGLTFELSSTSPEHYVMIELEVSLFA
DSGALIDKETIKVWQAIFRMPDSYLRKGQTRESRTFWIEGIDKAQWTKELMSLKIGEMDSRM

Sequences:

>Translated_222_residues
MYKALRTYISIALLLFSIPAIAGEVARVTLENGATVKLNDDFNWEYVILESQTKPDTAVPVTLPATVSTVAVAASTAPVE
TEALAKVEAVPTTLPANIETLTSTAIAQAELLKSTAKSGVKVSLLNSQWDDDGRLGLTFELSSTSPEHYVMIELEVSLFA
DSGALIDKETIKVWQAIFRMPDSYLRKGQTRESRTFWIEGIDKAQWTKELMSLKIGEMDSRM
>Mature_222_residues
MYKALRTYISIALLLFSIPAIAGEVARVTLENGATVKLNDDFNWEYVILESQTKPDTAVPVTLPATVSTVAVAASTAPVE
TEALAKVEAVPTTLPANIETLTSTAIAQAELLKSTAKSGVKVSLLNSQWDDDGRLGLTFELSSTSPEHYVMIELEVSLFA
DSGALIDKETIKVWQAIFRMPDSYLRKGQTRESRTFWIEGIDKAQWTKELMSLKIGEMDSRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24375; Mature: 24375

Theoretical pI: Translated: 4.54; Mature: 4.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKALRTYISIALLLFSIPAIAGEVARVTLENGATVKLNDDFNWEYVILESQTKPDTAVP
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEE
VTLPATVSTVAVAASTAPVETEALAKVEAVPTTLPANIETLTSTAIAQAELLKSTAKSGV
EEECCHHHHHEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
KVSLLNSQWDDDGRLGLTFELSSTSPEHYVMIELEVSLFADSGALIDKETIKVWQAIFRM
EEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCEECHHHHHHHHHHHHC
PDSYLRKGQTRESRTFWIEGIDKAQWTKELMSLKIGEMDSRM
CHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MYKALRTYISIALLLFSIPAIAGEVARVTLENGATVKLNDDFNWEYVILESQTKPDTAVP
CHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEECCCCCEEEEEEECCCCCCCEEE
VTLPATVSTVAVAASTAPVETEALAKVEAVPTTLPANIETLTSTAIAQAELLKSTAKSGV
EEECCHHHHHEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC
KVSLLNSQWDDDGRLGLTFELSSTSPEHYVMIELEVSLFADSGALIDKETIKVWQAIFRM
EEEEECCCCCCCCCEEEEEEECCCCCCEEEEEEEEEEEEECCCCEECHHHHHHHHHHHHC
PDSYLRKGQTRESRTFWIEGIDKAQWTKELMSLKIGEMDSRM
CHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA