Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899872

Identifier: 159899872

GI number: 159899872

Start: 4232558

End: 4233829

Strand: Direct

Name: 159899872

Synonym: Haur_3355

Alternate gene names: NA

Gene position: 4232558-4233829 (Clockwise)

Preceding gene: 159899871

Following gene: 159899873

Centisome position: 66.69

GC content: 49.37

Gene sequence:

>1272_bases
ATGATTAAGGAATCTACGCCAACGCAAGCCAGTGTGGCCGAAGCCCCTGCCCCTGCCAAATTGCCACGCGCTCGGCTTTT
TCAGATCAGCTTTGGGGTTGGCGGGGTCATGCTGGCGCGGGTGTTGGGGATTTTCACCCAAATTATTTTGGCACGACGCT
TGGGTGCTGAGCAATATGGCTTGTTTAACTCGCTGTATGCCTTGCTCAACCCACTGATTATTTTAGCCAACCTAGGCTTG
GATAATTGGCTATTGCGTCAAAGCACGGATCGTACAAAGCTCAACAAATCGGTAAGTCGGGTGTTTGCCTTACGGGGGTT
TGTGCTGGCAGGCCTGTTATTGGCCGCTGCACCATTTGTCAGTATGCGCAGCCCTGAATTTACCCCGCACCTCATTGCCT
TGGCTTGTGCCGGAATTATTGGCGATTTATTGGTAGGCACCGCTGATACCGCCTTGCGAGCCTCAATTCAAGTGCTCAAA
GCCTCAAGTTTGCAAATTGTGGTTGCGCTAAGTTTGTTTGTGCCGATTTGGTTTACCCCCAACTTGCCATTTTCCACCGT
GGTGATCTATCGTTGTATCGCGGTAGCCTTGGGCTTTGGCCTGAGTGTCTACTACTTGCATGGCATTTTGCGCTGGGTTT
GGCAACCACGCCAATGGATCAATACAATTAGCGAGGCGCGTTTCTACTTTATCTCCGAGGTGATGGCCTATTTGACCTTG
CGGGTTGATCTGTTTTTGGTGGCTTTGCTGCTACCAACGATCAATTCAGGGATTTATGCGCCACCACTAGCAATTATCAA
TAATACCTTTTTAGTGCCCAGTATTACCGCCCAAATCTTGCTACCGATGATCGTCAAGCATCCGCCGCGCTCACCACTCT
ATCGCCGCGTGATTAGCTTGGCAATTGGCTTGAGCATTCTCTACGGCTTGGCATGGTTGGCGCTGCTCACCTGGCATTCC
GATTGGATTATCAATCTGATGTATGGGCCACAATATGCCGATGCCATCCCGTTGTTGCAAATCATGGCCATCATTCCATT
GCTCAAAAGCCTGAATTTCTGCTGGGCGACCTTTATGGTTTCCAACGATCAGCAGCCGTTACGAGTTAAATTGCAAACCA
TCGGGGCCACAATTAGCATTCTCGGCAATTTTGTGGTGATTCCGTTGTATGGTCTGCATGGCGTAGCGATTATTAACATG
ATCACCGAAATTGCCCTGTTTATCTCGTATGGTTATGGAGCTTGGCTGACCTATAAGAAAGTGATGCGATGA

Upstream 100 bases:

>100_bases
ATGCATGGTCGGCGTTGGCGCTACGTTGGCGAGCAGGCTACGAGGAATCTTATGCGAACCAGGCACTTGACTCAACCTCA
ACCAAATAGCGAGTTTGGCA

Downstream 100 bases:

>100_bases
AGGTTTTATTATTGAATGCCCATTCGCCGCAAAATGCTGGCGATTTGGCCTTACTTGAGCAATCGTTGGCCCATTTACGA
GCCGCGTTTCCCCATGCCGA

Product: polysaccharide biosynthesis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 423; Mature: 423

Protein sequence:

>423_residues
MIKESTPTQASVAEAPAPAKLPRARLFQISFGVGGVMLARVLGIFTQIILARRLGAEQYGLFNSLYALLNPLIILANLGL
DNWLLRQSTDRTKLNKSVSRVFALRGFVLAGLLLAAAPFVSMRSPEFTPHLIALACAGIIGDLLVGTADTALRASIQVLK
ASSLQIVVALSLFVPIWFTPNLPFSTVVIYRCIAVALGFGLSVYYLHGILRWVWQPRQWINTISEARFYFISEVMAYLTL
RVDLFLVALLLPTINSGIYAPPLAIINNTFLVPSITAQILLPMIVKHPPRSPLYRRVISLAIGLSILYGLAWLALLTWHS
DWIINLMYGPQYADAIPLLQIMAIIPLLKSLNFCWATFMVSNDQQPLRVKLQTIGATISILGNFVVIPLYGLHGVAIINM
ITEIALFISYGYGAWLTYKKVMR

Sequences:

>Translated_423_residues
MIKESTPTQASVAEAPAPAKLPRARLFQISFGVGGVMLARVLGIFTQIILARRLGAEQYGLFNSLYALLNPLIILANLGL
DNWLLRQSTDRTKLNKSVSRVFALRGFVLAGLLLAAAPFVSMRSPEFTPHLIALACAGIIGDLLVGTADTALRASIQVLK
ASSLQIVVALSLFVPIWFTPNLPFSTVVIYRCIAVALGFGLSVYYLHGILRWVWQPRQWINTISEARFYFISEVMAYLTL
RVDLFLVALLLPTINSGIYAPPLAIINNTFLVPSITAQILLPMIVKHPPRSPLYRRVISLAIGLSILYGLAWLALLTWHS
DWIINLMYGPQYADAIPLLQIMAIIPLLKSLNFCWATFMVSNDQQPLRVKLQTIGATISILGNFVVIPLYGLHGVAIINM
ITEIALFISYGYGAWLTYKKVMR
>Mature_423_residues
MIKESTPTQASVAEAPAPAKLPRARLFQISFGVGGVMLARVLGIFTQIILARRLGAEQYGLFNSLYALLNPLIILANLGL
DNWLLRQSTDRTKLNKSVSRVFALRGFVLAGLLLAAAPFVSMRSPEFTPHLIALACAGIIGDLLVGTADTALRASIQVLK
ASSLQIVVALSLFVPIWFTPNLPFSTVVIYRCIAVALGFGLSVYYLHGILRWVWQPRQWINTISEARFYFISEVMAYLTL
RVDLFLVALLLPTINSGIYAPPLAIINNTFLVPSITAQILLPMIVKHPPRSPLYRRVISLAIGLSILYGLAWLALLTWHS
DWIINLMYGPQYADAIPLLQIMAIIPLLKSLNFCWATFMVSNDQQPLRVKLQTIGATISILGNFVVIPLYGLHGVAIINM
ITEIALFISYGYGAWLTYKKVMR

Specific function: Unknown

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46795; Mature: 46795

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKESTPTQASVAEAPAPAKLPRARLFQISFGVGGVMLARVLGIFTQIILARRLGAEQYG
CCCCCCCCCHHHHCCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LFNSLYALLNPLIILANLGLDNWLLRQSTDRTKLNKSVSRVFALRGFVLAGLLLAAAPFV
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMRSPEFTPHLIALACAGIIGDLLVGTADTALRASIQVLKASSLQIVVALSLFVPIWFTP
HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NLPFSTVVIYRCIAVALGFGLSVYYLHGILRWVWQPRQWINTISEARFYFISEVMAYLTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RVDLFLVALLLPTINSGIYAPPLAIINNTFLVPSITAQILLPMIVKHPPRSPLYRRVISL
HHHHHHHHHHHHHHCCCCCCCCHHHHCCCEECHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AIGLSILYGLAWLALLTWHSDWIINLMYGPQYADAIPLLQIMAIIPLLKSLNFCWATFMV
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
SNDQQPLRVKLQTIGATISILGNFVVIPLYGLHGVAIINMITEIALFISYGYGAWLTYKK
CCCCCCCEEEHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VMR
HHC
>Mature Secondary Structure
MIKESTPTQASVAEAPAPAKLPRARLFQISFGVGGVMLARVLGIFTQIILARRLGAEQYG
CCCCCCCCCHHHHCCCCCCCCCHHHEEEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHH
LFNSLYALLNPLIILANLGLDNWLLRQSTDRTKLNKSVSRVFALRGFVLAGLLLAAAPFV
HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SMRSPEFTPHLIALACAGIIGDLLVGTADTALRASIQVLKASSLQIVVALSLFVPIWFTP
HCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCC
NLPFSTVVIYRCIAVALGFGLSVYYLHGILRWVWQPRQWINTISEARFYFISEVMAYLTL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
RVDLFLVALLLPTINSGIYAPPLAIINNTFLVPSITAQILLPMIVKHPPRSPLYRRVISL
HHHHHHHHHHHHHHCCCCCCCCHHHHCCCEECHHHHHHHHHHHHHCCCCCCHHHHHHHHH
AIGLSILYGLAWLALLTWHSDWIINLMYGPQYADAIPLLQIMAIIPLLKSLNFCWATFMV
HHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
SNDQQPLRVKLQTIGATISILGNFVVIPLYGLHGVAIINMITEIALFISYGYGAWLTYKK
CCCCCCCEEEHHHHHHHHHHHHCHHEEEHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
VMR
HHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA